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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_O17
         (853 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch...   144   2e-35
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar...   143   2e-35
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces...    65   1e-11
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|...    40   3e-04
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1...    31   0.27 
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl...    28   1.5  
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos...    27   4.5  
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch...    26   5.9  
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch...    26   7.8  

>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 455

 Score =  144 bits (348), Expect = 2e-35
 Identities = 66/80 (82%), Positives = 71/80 (88%)
 Frame = -1

Query: 370 PPWCPEATWPKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 191
           P   P +   KV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFS
Sbjct: 364 PQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFS 423

Query: 190 EAREDLAALEKDYEEVGMDS 131
           EAREDLAALE+DYEEVG DS
Sbjct: 424 EAREDLAALERDYEEVGQDS 443



 Score =  125 bits (302), Expect = 7e-30
 Identities = 51/73 (69%), Positives = 63/73 (86%)
 Frame = -3

Query: 557 PPNQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 378
           P NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ +IK++RTIQFVDWCPTGFK+GI Y
Sbjct: 302 PYNQMVKCDPRTGRYMATCLLYRGDVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGICY 361

Query: 377 QPPTVVPGGDLAQ 339
           +PP  VPG  +A+
Sbjct: 362 EPPQHVPGSGIAK 374



 Score = 60.9 bits (141), Expect = 2e-10
 Identities = 25/38 (65%), Positives = 29/38 (76%)
 Frame = -2

Query: 669 PYPRIXXPXVTYAPVIXAEKAYHEQLSVAEITNACFEP 556
           PYPRI  P VTY+P++ A KA+HE  SV EITN CFEP
Sbjct: 265 PYPRIHFPLVTYSPIVSAAKAFHESNSVQEITNQCFEP 302


>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
           2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 449

 Score =  143 bits (347), Expect = 2e-35
 Identities = 68/92 (73%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
 Frame = -1

Query: 403 PVSRSVSTTSHPPWCPEATW-PKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHW 227
           P    +     PP   E +   KV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHW
Sbjct: 348 PTGFKIGICDRPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHW 407

Query: 226 YVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 131
           YVGEGMEEGEFSEAREDLAALE+DYEEVG DS
Sbjct: 408 YVGEGMEEGEFSEAREDLAALERDYEEVGQDS 439



 Score =  121 bits (291), Expect = 1e-28
 Identities = 50/73 (68%), Positives = 61/73 (83%)
 Frame = -3

Query: 557 PPNQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 378
           P NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ TIK KRTIQFVDWCPTGFK+GI  
Sbjct: 298 PYNQMVKCDPRAGRYMATCLLYRGDVIPRDVQAAVTTIKAKRTIQFVDWCPTGFKIGICD 357

Query: 377 QPPTVVPGGDLAQ 339
           +PP  + G ++A+
Sbjct: 358 RPPQHIEGSEIAK 370



 Score = 62.1 bits (144), Expect = 1e-10
 Identities = 26/38 (68%), Positives = 29/38 (76%)
 Frame = -2

Query: 669 PYPRIXXPXVTYAPVIXAEKAYHEQLSVAEITNACFEP 556
           PYPRI  P VTYAP++ A KA+HE  SV EITN CFEP
Sbjct: 261 PYPRIHFPLVTYAPIVSAAKAFHESNSVQEITNQCFEP 298


>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 448

 Score = 64.9 bits (151), Expect = 1e-11
 Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
 Frame = -1

Query: 343 PK-VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR---ED 176
           PK ++ +   + N+T+I E + RL  +F  M+ ++AF+HWY GEGM+E EF+EA     D
Sbjct: 358 PKDLKMSATFIGNSTSIQEIFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417

Query: 175 LAALEKDYEEVGMD 134
           L +  + Y+E G+D
Sbjct: 418 LVSEYQQYQEAGID 431



 Score = 57.2 bits (132), Expect = 3e-09
 Identities = 24/61 (39%), Positives = 35/61 (57%)
 Frame = -3

Query: 551 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 372
           N MV  DPRHG+Y+    L+RG V  K+V+  I +++TK +  FV+W P      +   P
Sbjct: 298 NMMVAADPRHGRYLTVAALFRGKVSMKEVDEQIRSVQTKNSAYFVEWIPDNVLKAVCSVP 357

Query: 371 P 369
           P
Sbjct: 358 P 358



 Score = 25.8 bits (54), Expect = 7.8
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -2

Query: 669 PYPRIXXPXVTYAPVIXAEKAYHEQLSVAEITNACFE 559
           P+PR+    V +AP+     +  + +SV E+T   F+
Sbjct: 259 PFPRLHFFMVGFAPLAAIGSSSFQAVSVPELTQQMFD 295


>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 446

 Score = 40.3 bits (90), Expect = 3e-04
 Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = -3

Query: 557 PPNQMVKCDP-RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 381
           P NQMV  +P +   +++   + +G+  P DV+ ++  I+ +R   F+ W P   +V ++
Sbjct: 302 PKNQMVSVNPSKKSCFISILDIIQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALS 361

Query: 380 YQPPTV 363
            + P +
Sbjct: 362 KKSPYI 367


>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 857

 Score = 30.7 bits (66), Expect = 0.27
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -1

Query: 490 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 356
           VV   P +  RP++P  P  LS     V PV+  V +   PP  P
Sbjct: 552 VVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAP 596


>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
           subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 709

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
 Frame = -2

Query: 285 GLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--RRITKKSAWTPLKARVR 112
           G+   TS TS T S       S++     S+P P   W P+        S+ TP+   V 
Sbjct: 148 GVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSALGTSSKTPVYVVVD 207

Query: 111 EPKSTK 94
           EP+ TK
Sbjct: 208 EPRFTK 213


>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 855

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 599 NSFPSPRSQTHASSPPNQMVKCDPRH 522
           N+ PS  + ++ S+ PNQ +K  P+H
Sbjct: 234 NAPPSIPANSNNSASPNQRIKASPKH 259


>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 628

 Score = 26.2 bits (55), Expect = 5.9
 Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
 Frame = -1

Query: 454 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 368
           +LP KPS+   +++S   V+P S   STTS+P
Sbjct: 5   TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36


>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
           Hus5|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 157

 Score = 25.8 bits (54), Expect = 7.8
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 473 WVRRHHGTAYSKPCTCHDGG 532
           W R H    Y+KPC   DGG
Sbjct: 16  WRRDHPFGFYAKPCKSSDGG 35


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,651,076
Number of Sequences: 5004
Number of extensions: 55940
Number of successful extensions: 218
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 218
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 422462090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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