Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_O17
(853 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 153 2e-37
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 153 2e-37
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 153 2e-37
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 153 2e-37
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 152 3e-37
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 151 4e-37
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 151 4e-37
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 62 3e-10
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 62 3e-10
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 62 5e-10
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 62 5e-10
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 62 5e-10
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 62 5e-10
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 62 5e-10
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 62 6e-10
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 62 6e-10
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 40 0.003
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 38 0.008
At5g33320.1 68418.m03955 triose phosphate/phosphate translocator... 33 0.32
At3g62210.1 68416.m06989 expressed protein contains Pfam profile... 30 1.7
At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 1.7
At4g14290.1 68417.m02202 expressed protein contains Interpro ent... 29 3.9
At5g45330.1 68418.m05564 expressed protein ; expression supporte... 29 5.2
At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to ... 29 5.2
At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 28 6.9
At1g68080.1 68414.m07777 expressed protein 28 6.9
At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase... 28 6.9
At1g23200.1 68414.m02898 pectinesterase family protein contains ... 28 6.9
At3g26855.1 68416.m03360 hypothetical protein 28 9.1
At3g23540.1 68416.m02962 expressed protein ; expression supporte... 28 9.1
At2g07360.1 68415.m00843 SH3 domain-containing protein contains ... 28 9.1
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 153 bits (370), Expect = 2e-37
Identities = 64/76 (84%), Positives = 69/76 (90%)
Frame = -3
Query: 566 ASSPPNQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG 387
A P + M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK G
Sbjct: 295 AFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCG 354
Query: 386 INYQPPTVVPGGDLAQ 339
INYQPPTVVPGGDLA+
Sbjct: 355 INYQPPTVVPGGDLAK 370
Score = 135 bits (327), Expect = 3e-32
Identities = 61/79 (77%), Positives = 69/79 (87%)
Frame = -1
Query: 370 PPWCPEATWPKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 191
P P KVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFS
Sbjct: 360 PTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFS 419
Query: 190 EAREDLAALEKDYEEVGMD 134
EAREDLAALEKDYEEVG +
Sbjct: 420 EAREDLAALEKDYEEVGAE 438
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = -2
Query: 669 PYPRIXXPXVTYAPVIXAEKAYHEQLSVAEITNACFEPA 553
PYPRI +YAPVI AEKA+HEQLSVAEITN+ FEPA
Sbjct: 261 PYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPA 299
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 153 bits (370), Expect = 2e-37
Identities = 64/76 (84%), Positives = 69/76 (90%)
Frame = -3
Query: 566 ASSPPNQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG 387
A P + M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK G
Sbjct: 295 AFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCG 354
Query: 386 INYQPPTVVPGGDLAQ 339
INYQPPTVVPGGDLA+
Sbjct: 355 INYQPPTVVPGGDLAK 370
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = -2
Query: 669 PYPRIXXPXVTYAPVIXAEKAYHEQLSVAEITNACFEPA 553
PYPRI +YAPVI AEKA+HEQLSVAEITN+ FEPA
Sbjct: 261 PYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPA 299
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -1
Query: 370 PPWCPEATWPKVQRAVCMLSNTTAIAE 290
P P KVQRAVCM+SN+T++AE
Sbjct: 360 PTVVPGGDLAKVQRAVCMISNSTSVAE 386
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 153 bits (370), Expect = 2e-37
Identities = 64/76 (84%), Positives = 69/76 (90%)
Frame = -3
Query: 566 ASSPPNQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG 387
A P + M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK G
Sbjct: 295 AFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCG 354
Query: 386 INYQPPTVVPGGDLAQ 339
INYQPPTVVPGGDLA+
Sbjct: 355 INYQPPTVVPGGDLAK 370
Score = 135 bits (327), Expect = 3e-32
Identities = 61/79 (77%), Positives = 69/79 (87%)
Frame = -1
Query: 370 PPWCPEATWPKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 191
P P KVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFS
Sbjct: 360 PTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFS 419
Query: 190 EAREDLAALEKDYEEVGMD 134
EAREDLAALEKDYEEVG +
Sbjct: 420 EAREDLAALEKDYEEVGAE 438
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = -2
Query: 669 PYPRIXXPXVTYAPVIXAEKAYHEQLSVAEITNACFEPA 553
PYPRI +YAPVI AEKA+HEQLSVAEITN+ FEPA
Sbjct: 261 PYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPA 299
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 153 bits (370), Expect = 2e-37
Identities = 64/76 (84%), Positives = 69/76 (90%)
Frame = -3
Query: 566 ASSPPNQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG 387
A P + M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK G
Sbjct: 295 AFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCG 354
Query: 386 INYQPPTVVPGGDLAQ 339
INYQPPTVVPGGDLA+
Sbjct: 355 INYQPPTVVPGGDLAK 370
Score = 135 bits (327), Expect = 3e-32
Identities = 61/79 (77%), Positives = 69/79 (87%)
Frame = -1
Query: 370 PPWCPEATWPKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 191
P P KVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFS
Sbjct: 360 PTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFS 419
Query: 190 EAREDLAALEKDYEEVGMD 134
EAREDLAALEKDYEEVG +
Sbjct: 420 EAREDLAALEKDYEEVGAE 438
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = -2
Query: 669 PYPRIXXPXVTYAPVIXAEKAYHEQLSVAEITNACFEPA 553
PYPRI +YAPVI AEKA+HEQLSVAEITN+ FEPA
Sbjct: 261 PYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPA 299
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 152 bits (368), Expect = 3e-37
Identities = 64/85 (75%), Positives = 69/85 (81%)
Frame = -3
Query: 593 FPSPRSQTHASSPPNQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 414
F P T P N M KCDPRHGKYMACC++YRGDVVPKDVN A+A IK KRTIQFVD
Sbjct: 286 FSVPEITTSVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQFVD 345
Query: 413 WCPTGFKVGINYQPPTVVPGGDLAQ 339
WCPTGFK GINYQPP+VVPGGDLA+
Sbjct: 346 WCPTGFKCGINYQPPSVVPGGDLAK 370
Score = 134 bits (325), Expect = 5e-32
Identities = 61/77 (79%), Positives = 67/77 (87%)
Frame = -1
Query: 370 PPWCPEATWPKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 191
P P KVQRAVCM+SN TA+AE ++R+DHKFDLMY+KRAFVHWYVGEGMEEGEFS
Sbjct: 360 PSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFS 419
Query: 190 EAREDLAALEKDYEEVG 140
EAREDLAALEKDYEEVG
Sbjct: 420 EAREDLAALEKDYEEVG 436
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/39 (61%), Positives = 28/39 (71%)
Frame = -2
Query: 669 PYPRIXXPXVTYAPVIXAEKAYHEQLSVAEITNACFEPA 553
PYPRI +YAPVI + KAYHEQ SV EIT + FEP+
Sbjct: 261 PYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPS 299
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 151 bits (367), Expect = 4e-37
Identities = 62/73 (84%), Positives = 68/73 (93%)
Frame = -3
Query: 557 PPNQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 378
P + M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINY
Sbjct: 298 PASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINY 357
Query: 377 QPPTVVPGGDLAQ 339
QPPTVVPGGDLA+
Sbjct: 358 QPPTVVPGGDLAK 370
Score = 136 bits (329), Expect = 2e-32
Identities = 62/79 (78%), Positives = 68/79 (86%)
Frame = -1
Query: 370 PPWCPEATWPKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 191
P P KVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFS
Sbjct: 360 PTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFS 419
Query: 190 EAREDLAALEKDYEEVGMD 134
EAREDLAALEKDYEEVG +
Sbjct: 420 EAREDLAALEKDYEEVGAE 438
Score = 61.3 bits (142), Expect = 8e-10
Identities = 29/39 (74%), Positives = 30/39 (76%)
Frame = -2
Query: 669 PYPRIXXPXVTYAPVIXAEKAYHEQLSVAEITNACFEPA 553
PYPRI +YAPVI A KAYHEQLSV EITNA FEPA
Sbjct: 261 PYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPA 299
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 151 bits (367), Expect = 4e-37
Identities = 62/73 (84%), Positives = 68/73 (93%)
Frame = -3
Query: 557 PPNQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 378
P + M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINY
Sbjct: 298 PASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINY 357
Query: 377 QPPTVVPGGDLAQ 339
QPPTVVPGGDLA+
Sbjct: 358 QPPTVVPGGDLAK 370
Score = 136 bits (329), Expect = 2e-32
Identities = 62/79 (78%), Positives = 68/79 (86%)
Frame = -1
Query: 370 PPWCPEATWPKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 191
P P KVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFS
Sbjct: 360 PTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFS 419
Query: 190 EAREDLAALEKDYEEVGMD 134
EAREDLAALEKDYEEVG +
Sbjct: 420 EAREDLAALEKDYEEVGAE 438
Score = 61.3 bits (142), Expect = 8e-10
Identities = 29/39 (74%), Positives = 30/39 (76%)
Frame = -2
Query: 669 PYPRIXXPXVTYAPVIXAEKAYHEQLSVAEITNACFEPA 553
PYPRI +YAPVI A KAYHEQLSV EITNA FEPA
Sbjct: 261 PYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPA 299
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 62.5 bits (145), Expect = 3e-10
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = -1
Query: 337 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 158
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 362 IKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 421
Query: 157 DYEE 146
+Y++
Sbjct: 422 EYQQ 425
Score = 55.2 bits (127), Expect = 5e-08
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = -3
Query: 551 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 372
N M DPRHG+Y+ ++RG + K+V+ I ++ K + FV+W P K + P
Sbjct: 299 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIP 358
Query: 371 PT 366
PT
Sbjct: 359 PT 360
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 62.5 bits (145), Expect = 3e-10
Identities = 26/67 (38%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = -1
Query: 343 PK-VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 167
PK ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 359 PKGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 418
Query: 166 LEKDYEE 146
L +Y++
Sbjct: 419 LVAEYQQ 425
Score = 54.0 bits (124), Expect = 1e-07
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = -3
Query: 551 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 372
N M DPRHG+Y+ ++RG + K+V+ I I+ K + FV+W P K + P
Sbjct: 299 NMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIP 358
Query: 371 P 369
P
Sbjct: 359 P 359
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 62.1 bits (144), Expect = 5e-10
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = -1
Query: 337 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 158
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 157 DYEE 146
+Y++
Sbjct: 421 EYQQ 424
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = -3
Query: 551 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 372
N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + P
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIP 357
Query: 371 PT 366
PT
Sbjct: 358 PT 359
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 62.1 bits (144), Expect = 5e-10
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = -1
Query: 337 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 158
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 157 DYEE 146
+Y++
Sbjct: 421 EYQQ 424
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = -3
Query: 551 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 372
N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + P
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIP 357
Query: 371 PT 366
PT
Sbjct: 358 PT 359
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 62.1 bits (144), Expect = 5e-10
Identities = 26/67 (38%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = -1
Query: 343 PK-VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 167
PK ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 358 PKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 166 LEKDYEE 146
L +Y++
Sbjct: 418 LVAEYQQ 424
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = -3
Query: 551 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGI 384
N M DPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 298 NMMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSV 353
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 62.1 bits (144), Expect = 5e-10
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = -1
Query: 337 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 158
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 157 DYEE 146
+Y++
Sbjct: 421 EYQQ 424
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = -3
Query: 551 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 372
N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + P
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIP 357
Query: 371 PT 366
PT
Sbjct: 358 PT 359
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 62.1 bits (144), Expect = 5e-10
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = -1
Query: 337 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 158
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 157 DYEE 146
+Y++
Sbjct: 421 EYQQ 424
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = -3
Query: 551 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 372
N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + P
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIP 357
Query: 371 PT 366
PT
Sbjct: 358 PT 359
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 61.7 bits (143), Expect = 6e-10
Identities = 24/61 (39%), Positives = 41/61 (67%)
Frame = -1
Query: 328 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 149
A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 364 ASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 423
Query: 148 E 146
+
Sbjct: 424 Q 424
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = -3
Query: 551 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGI 384
N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K +
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV 353
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 61.7 bits (143), Expect = 6e-10
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = -1
Query: 337 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 158
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
Query: 157 DYEE 146
+Y++
Sbjct: 421 EYQQ 424
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = -3
Query: 551 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 372
N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K +
Sbjct: 298 NMMCAADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVCDIA 357
Query: 371 PT 366
PT
Sbjct: 358 PT 359
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = -3
Query: 518 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTV 363
KY++ + +G+V P V+ ++ I+ ++ + F+DW P +V ++ + P V
Sbjct: 318 KYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPYV 369
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 37.9 bits (84), Expect = 0.008
Identities = 13/52 (25%), Positives = 31/52 (59%)
Frame = -3
Query: 518 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTV 363
KY++ + +G+V P V+ ++ I+ ++ + F++W P +V ++ + P V
Sbjct: 318 KYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPYV 369
>At5g33320.1 68418.m03955 triose phosphate/phosphate translocator,
putative similar to SWISS-PROT:P52178 triose
phosphate/phosphate translocator [Cauliflower] {Brassica
oleracea}
Length = 408
Score = 32.7 bits (71), Expect = 0.32
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 279 ALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTW 172
A ++S + +P+V+S S R WR SS P+R W
Sbjct: 31 AASSSDLNVSPNVVSIPSLSRRSWRLASSDSPLRAW 66
>At3g62210.1 68416.m06989 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537; expression
supported by MPSS
Length = 279
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 456 GRVHILGY-DVTTVQHTASHVLAMTGVAFHHL 548
GRV I Y D + + H H L TG+ HH+
Sbjct: 59 GRVSISAYGDTSGIPHVIQHALNSTGIELHHV 90
>At1g29200.1 68414.m03573 hypothetical protein contains Pfam
PF03138: Plant protein family. The function of this
family of plant proteins is unknown;
Length = 698
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 375 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 479
LV DT+L TPVD ++ L G VH+ GY
Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394
>At4g14290.1 68417.m02202 expressed protein contains Interpro entry
IPR000379
Length = 534
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = +3
Query: 279 RAQASAMAVVLDNMQTAR*TLGQVASGHHGGWLVVDTDLETGWTPVDELDSTLGFDGSDG 458
RA AS A+VL TL SG GG V GW D+L + + + +DG
Sbjct: 78 RADASEAAIVLLPSNITIFTLDFSGSGLSGGEHVT-----LGWNEKDDLKAVVEYLRTDG 132
Query: 459 RVHILG 476
V ++G
Sbjct: 133 NVSLIG 138
>At5g45330.1 68418.m05564 expressed protein ; expression supported
by MPSS
Length = 571
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -1
Query: 490 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPKVQR 329
VVT P + + S S PS L + P SVS+ PP + + P +Q+
Sbjct: 260 VVTRSPDVSSNQSYSSNPSPLGQTQLHTPPGLASVSSNLSPPSEAQLSAPNIQK 313
>At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to
SP|P11035 Nitrate reductase 2 (formerly EC 1.6.6.1)
(NR2) {Arabidopsis thaliana}
Length = 917
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 151 RNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRT 267
R +R +PG +G+ R+ PP P R S + H +T +T
Sbjct: 8 RQYARLEPGLNGVVRSYKPPVPGRSDSPKAHQNQTTNQT 46
>At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 587
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -3
Query: 491 RGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 348
+G V D A T TK+ + DW P+ FK PP ++P D
Sbjct: 308 QGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355
>At1g68080.1 68414.m07777 expressed protein
Length = 383
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 417 DELDSTLGFDGSDGRVHILGYDVTTVQ 497
D + +GFD R+H+LG+DV ++Q
Sbjct: 211 DGSNQNIGFDVCVARLHLLGFDVHSLQ 237
>At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase
(MAPKK), putative (MKK4) identical to MAP kinase kinase
4 [Arabidopsis thaliana] gi|3219271|dbj|BAA28830
gi_13265419
Length = 366
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +1
Query: 64 ASAP*KIFHWLSTLRLPHPRLQRSPCRLLRNPS--RGQPG----PHGLRRTLPPPYPHRR 225
A+A + H++S P +RS +LL++P R P P L + LPPP P
Sbjct: 301 ATASPEFRHFISCCLQREPGKRRSAMQLLQHPFILRASPSQNRSPQNLHQLLPPPRPLSS 360
Query: 226 TSA 234
+S+
Sbjct: 361 SSS 363
>At1g23200.1 68414.m02898 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 554
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 470 PWVRRHHGTAYSKPCTCHDGGRISPSGWAGSKHAFVIS 583
PW R H T + K C+ G +SP+GW +F +S
Sbjct: 461 PW-RSHSRTVFMK---CNLGALVSPAGWLPWSGSFALS 494
>At3g26855.1 68416.m03360 hypothetical protein
Length = 163
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 258 SCTPSVLSCTGTSVRVWRRESSPK 187
SC P +LS + VR W +SSPK
Sbjct: 114 SCNPMLLSTFPSIVRAWDGKSSPK 137
>At3g23540.1 68416.m02962 expressed protein ; expression supported
by MPSS
Length = 568
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/66 (31%), Positives = 28/66 (42%)
Frame = +3
Query: 279 RAQASAMAVVLDNMQTAR*TLGQVASGHHGGWLVVDTDLETGWTPVDELDSTLGFDGSDG 458
RA S A+VL TL SG GG V GW D+L + + F DG
Sbjct: 75 RADGSEAAIVLLPSNITVFTLDFSGSGLSGGEHVT-----LGWNEKDDLKAVVEFLRQDG 129
Query: 459 RVHILG 476
+ ++G
Sbjct: 130 NISLIG 135
>At2g07360.1 68415.m00843 SH3 domain-containing protein contains
Pfam profile PF00018: SH3 domain
Length = 1196
Score = 27.9 bits (59), Expect = 9.1
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = -1
Query: 451 LPSKPSVLSNSSTGVQPVSRSVSTTS--HPPWCPEATW--PKVQRAVCMLSNTTAIAEAW 284
+P++ + S SST QP S S S++S H P + T K +RA M I+ A
Sbjct: 20 VPAQSTSSSASSTASQPTSASASSSSHLHHPMSTKTTLGEKKSKRATLMQIQNDTISVAK 79
Query: 283 ARLD 272
A L+
Sbjct: 80 AALN 83
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,593,012
Number of Sequences: 28952
Number of extensions: 329114
Number of successful extensions: 1215
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1215
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1980143200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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