Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_O16
(854 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 126 2e-29
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 2e-24
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 100 3e-21
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 83 2e-16
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 2e-13
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0) 36 0.042
SB_25234| Best HMM Match : SMC_hinge (HMM E-Value=3.7e-28) 33 0.30
SB_43252| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.68
SB_26137| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.27) 32 0.68
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.68
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 31 0.90
SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_17273| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_39966| Best HMM Match : CRA_rpt (HMM E-Value=8.6) 31 1.6
SB_54719| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.045) 31 1.6
SB_54255| Best HMM Match : DUF329 (HMM E-Value=7.8) 29 3.6
SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19) 29 3.6
SB_31775| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 24 4.4
SB_1024| Best HMM Match : Ank (HMM E-Value=0) 29 4.8
SB_56390| Best HMM Match : CHASE3 (HMM E-Value=0.042) 29 6.4
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 29 6.4
SB_10066| Best HMM Match : GPS (HMM E-Value=8.6e-07) 29 6.4
SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_7914| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 126 bits (305), Expect = 2e-29
Identities = 55/98 (56%), Positives = 77/98 (78%)
Frame = -2
Query: 475 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLA 296
ED+KQ++ IQ KN+LESY +SMKST+ED+K+K+KIS+ DK+ ILDKC + +KWLD+NQ A
Sbjct: 530 EDEKQRDRIQTKNSLESYAYSMKSTVEDDKVKDKISEEDKKAILDKCTEVLKWLDTNQTA 589
Query: 295 DKEEYEHKQKELEGIYNPIITKM*PGCRRSPRRYAGLP 182
+K+E+E+ QKELE + NPIITK+ +P G+P
Sbjct: 590 EKDEFEYHQKELEKVCNPIITKLYQQAGGAPPGAGGMP 627
Score = 108 bits (259), Expect = 6e-24
Identities = 51/58 (87%), Positives = 55/58 (94%)
Frame = -1
Query: 653 RGVXQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYR 480
RGV QIEVTFDIDANGILNVSA++KST KENKITITNDKGRLSKE+IERMVNEA KY+
Sbjct: 471 RGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVNEASKYK 528
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 109 bits (263), Expect = 2e-24
Identities = 47/85 (55%), Positives = 67/85 (78%)
Frame = -2
Query: 472 DDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLAD 293
D+ +E IQ+KN+LESY FSMKSTMEDEK+K+K+S+ +++ ++ +C T+ WL+ NQ A+
Sbjct: 623 DEAVRERIQSKNSLESYAFSMKSTMEDEKVKDKLSEDEREKVISRCKATLDWLEHNQSAE 682
Query: 292 KEEYEHKQKELEGIYNPIITKM*PG 218
KEE + QKELEG+ NPIITK+ G
Sbjct: 683 KEEIDAHQKELEGVCNPIITKLYQG 707
Score = 103 bits (247), Expect = 2e-22
Identities = 47/58 (81%), Positives = 55/58 (94%)
Frame = -1
Query: 653 RGVXQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYR 480
RGV QI+VTFD+D+NGILNVSA++KST KENKITITNDKGRLSKE+IERMV EAEK++
Sbjct: 563 RGVPQIDVTFDVDSNGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVKEAEKFK 620
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 99.5 bits (237), Expect = 3e-21
Identities = 47/58 (81%), Positives = 52/58 (89%)
Frame = -1
Query: 653 RGVXQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYR 480
RGV QIEVTFDIDANGILNVSA +KST K ITITNDKGRLSKEEI+RM+N+AEKY+
Sbjct: 470 RGVPQIEVTFDIDANGILNVSAKDKSTGKTGSITITNDKGRLSKEEIDRMINDAEKYK 527
Score = 89.4 bits (212), Expect = 3e-18
Identities = 37/83 (44%), Positives = 59/83 (71%)
Frame = -2
Query: 475 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLA 296
ED+ Q+E I A+N LESY F +KS + + L+ K+S SDK T+ +K + + WL+ N LA
Sbjct: 529 EDEAQREKIAARNRLESYAFGVKSAISEPSLEGKLSQSDKDTVKNKVEEVLNWLEKNSLA 588
Query: 295 DKEEYEHKQKELEGIYNPIITKM 227
+KEE+E ++KEL+ + +PI+ K+
Sbjct: 589 EKEEFEEQEKELQRVCSPIMAKV 611
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 83.4 bits (197), Expect = 2e-16
Identities = 39/57 (68%), Positives = 47/57 (82%)
Frame = -1
Query: 653 RGVXQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKY 483
RGV QIEVTF+ID NGIL VSA +K T + KITITND+ RL+ E+IERMVN+AEK+
Sbjct: 1164 RGVPQIEVTFEIDVNGILRVSAEDKGTGNKEKITITNDQNRLTPEDIERMVNDAEKF 1220
Score = 72.1 bits (169), Expect = 5e-13
Identities = 32/79 (40%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Frame = -2
Query: 475 EDDKQKETIQAKNALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNDTIKWLDSNQL 299
ED K KE ++A+N LESY +S+K+ + D EKL K+S+ DK+TI + I W+D NQ
Sbjct: 1223 EDKKTKEKVEARNELESYAYSLKNQVGDKEKLGGKLSEDDKKTITEAVEKAISWMDKNQD 1282
Query: 298 ADKEEYEHKQKELEGIYNP 242
A E+++ ++++ + +Y+P
Sbjct: 1283 ASVEDFKKEKRKWKMLYSP 1301
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 73.7 bits (173), Expect = 2e-13
Identities = 38/65 (58%), Positives = 45/65 (69%)
Frame = -1
Query: 653 RGVXQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRXR 474
RGV Q+EVTFDIDANGI+NVSA +K T +E +I I G LSK+ IE M+ EAEKY
Sbjct: 275 RGVPQVEVTFDIDANGIVNVSARDKGTGREQQIVI-QSSGGLSKDAIENMIKEAEKYAEA 333
Query: 473 G*QAK 459
Q K
Sbjct: 334 DKQKK 338
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 39.9 bits (89), Expect = 0.003
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = -2
Query: 493 QRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKIS-DSDKQTILDKCNDTIKW 317
+ + + DD + +AKNALES+ F ++ M E L EK+S +++++TI + W
Sbjct: 703 KEAPKARDDAKAANERAKNALESHIFGVRDEMNSE-LGEKLSTEAERETISEALTAASDW 761
Query: 316 LDSN 305
LD +
Sbjct: 762 LDED 765
>SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 823
Score = 35.9 bits (79), Expect = 0.042
Identities = 20/76 (26%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Frame = -2
Query: 448 QAKNALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNDTIKWLDSN-QLADKEEYEH 275
+A+ L++ S K T+ D +K + + D+ + C++ +WL++N A EE
Sbjct: 734 EAQFELKALITSTKETIADPDKHMGRFTKDDRVSGNRYCDEKSEWLENNADTASLEEIVK 793
Query: 274 KQKELEGIYNPIITKM 227
++++L G+ PI++K+
Sbjct: 794 QKEDLAGVLQPILSKL 809
>SB_25234| Best HMM Match : SMC_hinge (HMM E-Value=3.7e-28)
Length = 552
Score = 33.1 bits (72), Expect = 0.30
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -2
Query: 499 MRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIK 320
+R + D QKE QA +E Y S++ E KE + S+K+ + ++C + IK
Sbjct: 10 VRHEESTRAGDLQKEVTQASENIEKYSQSIRDLGE----KENVLTSEKKQLEEECQENIK 65
>SB_43252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 699
Score = 31.9 bits (69), Expect = 0.68
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = -2
Query: 412 MKSTMEDEKLKEKISDSDKQTILDKCNDTIKW-LDSNQLADKEEYEHKQKELEGIYNPII 236
+++ + EK K + D +++ L + T+K+ LD +LA KE++ +KE EG +
Sbjct: 100 VENDRDSEKHKRDLRDKEQE--LSELRKTVKYALDQEKLA-KEQFGDLKKEFEGYKKKMD 156
Query: 235 TKM 227
TKM
Sbjct: 157 TKM 159
>SB_26137| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.27)
Length = 271
Score = 31.9 bits (69), Expect = 0.68
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = -2
Query: 496 RQRSTEXEDDKQKETIQAKNA-LESYCFSMKSTM-EDEKLKEKISDSDKQTILDKCNDTI 323
++ TE E +KE K A E + K E E +EK ++++K+ +K +T
Sbjct: 158 KEAGTEKEAQTEKEAQMEKEAETEKEAQTEKEAQTEKEAEREKEAETEKEAKTEKEAETE 217
Query: 322 KWLDSNQLADKEEYEHKQKELE 257
K + + A+ ++ KQKE E
Sbjct: 218 KEAQTEKEAETQKEAEKQKEAE 239
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 31.9 bits (69), Expect = 0.68
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = -2
Query: 499 MRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI--LDKCNDT 326
+ ++ +E D+K K + K L+ + + K + +DS K+ + + + NDT
Sbjct: 1644 LHEKMSEMNDEKDKLDDENKQLLDEKSREVTDLKGEVKKAQDDADSVKRLVDAIIEENDT 1703
Query: 325 IKWLDSNQLADKEEYEHKQKEL 260
+K + + LA +E+ EH EL
Sbjct: 1704 LKQSEHDLLAIQEDLEHTIDEL 1725
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/67 (28%), Positives = 37/67 (55%)
Frame = -2
Query: 457 ETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYE 278
E + L+ + M + E E +KE + +++++ KC +T K LD+++ D+E+ E
Sbjct: 1059 EAVDEAKTLKESLYRMVN--EHETMKESLLNANREIGRLKCENTAKNLDADRKEDQED-E 1115
Query: 277 HKQKELE 257
Q+E E
Sbjct: 1116 EVQREGE 1122
Score = 29.1 bits (62), Expect = 4.8
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = -2
Query: 520 KRSSVWLMRQRSTEXEDDKQKETIQAKNA-LESYCFSMKSTMEDEKLKEKISDSDKQTIL 344
K + + MR++ + ++ +K I +KN+ L + S +E+ +E +SDSD L
Sbjct: 1943 KNNEIEEMREKMRKANEEIEK--ILSKNSKLSDILNELNSGIENILNEETLSDSDPNVKL 2000
Query: 343 DKCNDTIKWLDSNQLADKEEYEHKQKE 263
K + + L+ KEE E +E
Sbjct: 2001 QKLREKFENLEKQVNNVKEEAEKNVQE 2027
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 31.5 bits (68), Expect = 0.90
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = -2
Query: 496 RQRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI---SDSDKQTILDKC-ND 329
R+R + +Q++ + K E K E EK KE++ + +KQ ++ +
Sbjct: 917 REREEKERKRRQQQLEKEKKEKEKKLLIEKEKREKEKQKERLREKEEKEKQKEAERAKKE 976
Query: 328 TIKWLDSNQLADKEEYEHKQKE 263
+ L ++L +KEE + K KE
Sbjct: 977 KERLLQEDKLHEKEEKDRKDKE 998
>SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 31.5 bits (68), Expect = 0.90
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -3
Query: 630 HLRHRCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQ 523
H +H+ ++ Q+ +Y++ HQ Q H Q+Q+ Q
Sbjct: 291 HQQHQLHQHQQQHQYQQQHQHQHQHQHQQQQQQQQQ 326
>SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 31.5 bits (68), Expect = 0.90
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Frame = -2
Query: 415 SMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSN------QLADK-EEYEHKQKELE 257
S K ++ +K ++ D +K+ +++C TIK LDSN Q+AD+ EE + ++ELE
Sbjct: 174 SNKLVVDLQKTRKAQDDCEKE--VNRCEATIKTLDSNLKDLRQQVADRDEELNNNRQELE 231
Query: 256 GI 251
+
Sbjct: 232 SV 233
>SB_17273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 58
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -2
Query: 337 CNDTIKWLDSN-QLADKEEYEHKQKELEGIYNPIITKM 227
C++ +WL++N A EE ++++L G+ PI++K+
Sbjct: 7 CDEKSEWLENNADTASLEEIVKQKEDLAGVLQPILSKL 44
>SB_39966| Best HMM Match : CRA_rpt (HMM E-Value=8.6)
Length = 159
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = -2
Query: 493 QRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 314
++ TE E++K K+ K A E+ ++ E E KEK ++K+ K +T K
Sbjct: 40 KKKTEKEEEKWKQEETEKEA-ET---EKEAETEKEAEKEKKKKTEKEEEKGKQEETGKEA 95
Query: 313 DSNQLADKEEYEHKQKE 263
++ + A+ E+ E +KE
Sbjct: 96 ETEKQAETEKQEETEKE 112
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = -2
Query: 481 EXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQ 302
E E +K+ ET + + + E +K EK + KQ +K +T K ++ +
Sbjct: 10 EGETEKEGETEKEAETKKEAETEKEEEKETKKKTEKEEEKWKQEETEKEAETEKEAETEK 69
Query: 301 LADKEEYEHKQKELE 257
A+KE+ + +KE E
Sbjct: 70 EAEKEKKKKTEKEEE 84
>SB_54719| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.045)
Length = 782
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Frame = -2
Query: 460 KETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD------KCNDTIKWL--DSN 305
KE +Q + L ++ + K +E EK+ IS +D + +L+ K + I+ L + +
Sbjct: 299 KERLQIERKLANFTKTSKKEVESEKV---ISRTDGKKVLELEKDISKKKNEIRRLRTELS 355
Query: 304 QLADKEEYEHKQKELEG 254
QL + +++H +KELEG
Sbjct: 356 QLQENSKHKHFEKELEG 372
>SB_54255| Best HMM Match : DUF329 (HMM E-Value=7.8)
Length = 82
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -2
Query: 409 KSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKEL 260
K T ED++ ++K ++SD Q + N T K +L + +E K+ EL
Sbjct: 33 KVTQEDQEPEKKSNESDPQKDQETDNKTSKKESQEELREADETPKKKDEL 82
>SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19)
Length = 86
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -1
Query: 170 PEPEVPPPGLEALAPPSRRSIKP-TFHTTLKPTCNNHLVTSP 48
P+P+ PPPG PPS + P T +P VT P
Sbjct: 28 PKPDTPPPGTNIPTPPSPNTPPPVTQPPVTQPPVTQPPVTQP 69
>SB_31775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/67 (29%), Positives = 27/67 (40%)
Frame = -1
Query: 251 LQSDNYEDVTRVPEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTC 72
L D + +R S + C A+ P + L+ P S S +PT TL C
Sbjct: 402 LPKDVFITGSRFFSGSEQYCYFGDAKVPATFMNDTTLKCTVPTSSVSSRPTVAVTLNGGC 461
Query: 71 NNHLVTS 51
NN TS
Sbjct: 462 NNFTTTS 468
>SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -3
Query: 612 QRYPQRFRYREVHQQGEQDHHYQRQRSSLQGRDRAYG**GREVQKXRMTSKRR 454
QR QR R R+ H+Q ++ QRQR + R R R+ Q+ R ++R
Sbjct: 36 QRQRQRQRQRQRHRQRQRQRQRQRQRQRQRQRQRQ-----RQRQRQRQRQRQR 83
>SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1755
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = -2
Query: 493 QRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 314
++ E K K + + A E S++ ++ E+ EK ++T D+ N TI +L
Sbjct: 1661 EKEQNIESIKDKLWAEFEEAKED---SVREALDSER--EKWRKEYEKTTQDEINKTISYL 1715
Query: 313 DSNQLADKEEYEHKQ 269
+ EE++HK+
Sbjct: 1716 EDQYTRGLEEFKHKE 1730
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 23.8 bits (49), Expect(2) = 4.4
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -1
Query: 221 RVPEESPEVCRASRAEHPEPEVPPPGLEALAPPS 120
R PE+ EV S + P L+ L PPS
Sbjct: 28 RFPEDDLEVSSVSASASSSTSRPTNALQPLKPPS 61
Score = 23.8 bits (49), Expect(2) = 4.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 134 LAPPSRRSIKPTFHTTLKPTCNNH 63
L PPSR+S P HT P+C ++
Sbjct: 80 LTPPSRQSNNPRPHT--PPSCQSN 101
>SB_1024| Best HMM Match : Ank (HMM E-Value=0)
Length = 891
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -1
Query: 215 PEESP--EVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPT 99
PE+ P EV A R E P+ E PP +PP ++ KPT
Sbjct: 771 PEQPPIGEVESAVRREQPKSEKTPPSTTP-SPPPKQPSKPT 810
>SB_56390| Best HMM Match : CHASE3 (HMM E-Value=0.042)
Length = 440
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -1
Query: 257 RHLQSDNYEDVTRVPEESPEVCRASRA-EHPEPEVPPPGLEALAPPSRRS 111
+ L+S + +D + E P V + R E +P PPP APP ++
Sbjct: 320 QRLESKDTKDDEPMEIEPPNVTKPDRTTEQTQPSPPPPETVTTAPPLHKT 369
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/55 (23%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = -2
Query: 397 EDEKLKEKISDSDK-QTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPII 236
++E L++++S+ ++ Q ++++ N+T+K L +K+E K L+ +N ++
Sbjct: 31 DNESLQKRVSELEEHQKVIEETNETLKKQHETVLFEKDELTLTIKTLQEEFNTML 85
>SB_10066| Best HMM Match : GPS (HMM E-Value=8.6e-07)
Length = 1146
Score = 28.7 bits (61), Expect = 6.4
Identities = 21/68 (30%), Positives = 28/68 (41%)
Frame = -1
Query: 251 LQSDNYEDVTRVPEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTC 72
L D + +R S + C A+ P + L+ P S S +PT TL C
Sbjct: 69 LPKDVFITGSRFFSGSEQYCYFGDAKVPATFMNDTTLKCTVPTSSVSSRPTVAVTLNGGC 128
Query: 71 NNHLVTSP 48
NN TSP
Sbjct: 129 NN-FTTSP 135
>SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3
Query: 618 RCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQGRD 514
R QRY + + RE HQ+G HH R S + RD
Sbjct: 134 RDQRY-RDYEDRERHQRGRDRHHRDRDDSGCRFRD 167
>SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1128
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -1
Query: 194 CRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPT 75
C A A+ P+ +VPPP APP + P TT PT
Sbjct: 92 CNAKPAQ-PDTDVPPPPATTSAPPPPTTTAPP-ATTSPPT 129
>SB_7914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -2
Query: 397 EDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKE 263
EDE+ E SD D +T +++ +D ++ D+EE HK +E
Sbjct: 118 EDEEKTESESDDDDKTEKYSDDESDVSMDGDESDDEEEGPHKPEE 162
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,675,563
Number of Sequences: 59808
Number of extensions: 405287
Number of successful extensions: 2082
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2053
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2431332827
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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