Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_O15
         (799 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    23   2.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   3.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.7  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   4.9  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   4.9  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   6.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.5  

>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
 Frame = +2

Query: 254 VSFHRWRFSSELLEPHAFLSPXPVYALVQLQVHSMFSVHYFI---QQLVILPY 403
           VSFH+ + ++ + + H FL    V  L  L     +   + +     ++ LPY
Sbjct: 72  VSFHKLKLTNNISDKHGFLKEKAVDFLTILNSMHKYQPRFHLVRANDILKLPY 124


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +1

Query: 637 VRFSCVQXSVDQLLDNKTDVIIFQKLRGSHCLXVVPGRH 753
           V F C + SVD L DN +       +  +    V+PG +
Sbjct: 73  VIFYCQEGSVDFLFDNFSAAFQDHNIEITEVAPVLPGNY 111


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +1

Query: 637 VRFSCVQXSVDQLLDNKTDVIIFQKLRGSHCLXVVPGRH 753
           V F C + SVD L DN +       +  +    V+PG +
Sbjct: 306 VIFYCQEGSVDFLFDNFSAAFQDHNIEITEVAPVLPGNY 344


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +1

Query: 637 VRFSCVQXSVDQLLDNKTDVIIFQKLRGSHCLXVVPGRH 753
           V F C + SVD L DN +       +  +    V+PG +
Sbjct: 306 VIFYCQEGSVDFLFDNFSAAFQDHNIEITEVAPVLPGNY 344


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 425 SVTSLVLGCLPRPGGRCTSRDGS 493
           S++   L C   P  RC SR+ S
Sbjct: 68  SISEDPLNCRDLPNSRCNSRESS 90


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = +1

Query: 517 CLPMIFTLSCLVIKFD-F*REKVIDYIVVSGGPQLVRVCEHVRFSCVQXSVDQLLDNKTD 693
           CL   F L  L  K +   RE  +   V+ G    + +C     + V  SV QL++NK +
Sbjct: 283 CLSYCFNLYHLASKSNQLSREAKVTKTVLLGVK--IDICNEEERNSVVASVLQLMENKIE 340

Query: 694 V 696
           +
Sbjct: 341 I 341


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +2

Query: 206 SWFSMSKTLPVSSTTGVSFHRWRFSSELLEPHAFLSP 316
           +WF +   L      G +      ++ LL PH +LSP
Sbjct: 83  NWFKIHCLLQEQQQAGANMAA---AANLLRPHPYLSP 116


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 491 SHLDWYNDRLAWGDSQG 441
           S + W  D+  WG S+G
Sbjct: 377 SIVQWMQDQKGWGRSEG 393


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = -3

Query: 770 ICWSSTCRPGTT 735
           +CW S C+ G +
Sbjct: 760 VCWQSNCKKGAS 771


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,219
Number of Sequences: 336
Number of extensions: 3569
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)