Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_O15
(799 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0395 - 20354713-20355570 31 0.80
11_01_0780 - 6531579-6531608,6531732-6532064,6533219-6533325,653... 31 1.1
04_03_0872 + 20452534-20453271 30 1.9
03_02_0714 + 10617860-10618588 30 1.9
11_06_0743 + 26847652-26849424 29 3.2
09_04_0245 + 15995689-15995742,15995979-15996075,15996165-159961... 29 4.3
08_02_0819 - 21529913-21530064,21531016-21531082,21531284-215313... 29 4.3
01_01_0653 - 4981517-4981738,4981841-4981976,4982066-4982121,498... 29 4.3
10_08_1019 - 22299800-22299946,22300040-22300109,22300930-223010... 29 5.7
09_04_0741 - 19852339-19852497,19853185-19853246,19853352-198534... 29 5.7
04_03_0831 - 20133298-20133401,20133500-20133586,20133984-201340... 29 5.7
02_04_0366 - 22389591-22390527,22391296-22391429,22391762-223918... 29 5.7
02_01_0166 + 1154695-1156569 29 5.7
06_03_1496 - 30567968-30568210,30568345-30568513,30568635-305687... 28 7.5
06_01_0657 + 4767803-4768114,4768394-4768471,4768763-4768786 28 7.5
04_04_0232 + 23794109-23794399,23795290-23796621 28 7.5
04_03_0640 + 18257612-18257787,18257831-18257906,18259105-18260556 28 7.5
06_03_0479 - 21289903-21290124,21290207-21290342,21290435-212904... 28 9.9
02_04_0619 - 24481641-24482291,24482426-24482640,24482770-244831... 28 9.9
>06_03_0395 - 20354713-20355570
Length = 285
Score = 31.5 bits (68), Expect = 0.80
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +3
Query: 156 GRRTSPRSRPASDPARTRGSL*VRRCRSPALPASASTG--GASLPSCWSPTLSCLRYPST 329
GRR P P + P + RRCR P+ + +TG SLP C ++ P+T
Sbjct: 122 GRRRQPPP-PTAPPLEAPANGCCRRCRGPSTAVATATGAPSTSLPCCCRHVVASSAAPAT 180
>11_01_0780 -
6531579-6531608,6531732-6532064,6533219-6533325,
6534267-6534316,6535110-6537065,6537458-6538209
Length = 1075
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -2
Query: 681 IEELIDRLL-HARESNMFAYADKLWSAGHHDIVNDFFP 571
+++LID + H ++ F D LW DI+N FP
Sbjct: 236 VQDLIDNIRDHIQDKRYFIVIDDLWETTSWDIINSAFP 273
>04_03_0872 + 20452534-20453271
Length = 245
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +3
Query: 186 ASDPARTRGSL*VRRCRSPALPASASTGGASLPSCWSPTLSCLRYPST 329
A+ A + G+L R+ A ASAS GG SL SPT + P T
Sbjct: 98 AAAAAASAGTLLRRKATIAAAAASASGGGGSLSPTQSPTSAARAIPMT 145
>03_02_0714 + 10617860-10618588
Length = 242
Score = 30.3 bits (65), Expect = 1.9
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +2
Query: 158 SPYQSTLASSFRPCPYSWFSMSKTLPVSSTTGVSFHRWRFSSELLEPHAFLS-PXPVYAL 334
S Y + LA + P P + + K+ S+ G+S +R + +A + P P A
Sbjct: 46 SRYAARLALAAGPLPPAASARLKSF--ESSVGLSRKAFRLGKFVQNVNALRAHPHPPPA- 102
Query: 335 VQLQVHSMFSVHYFIQQLVILPYRNKLPAHSVTSL 439
V L + V+YF++Q V L LPAH + L
Sbjct: 103 VALLAYGGEGVYYFLEQFVWLAKAGLLPAHLLPRL 137
>11_06_0743 + 26847652-26849424
Length = 590
Score = 29.5 bits (63), Expect = 3.2
Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = +3
Query: 135 RCFPRAGGRRTSPRSRPASDPARTRGSL*VRRCRSPALPASAST--GGASLPSCWSPTL 305
RC PR R +P S S P PALPA+A T G SLP WS L
Sbjct: 305 RCSPRCRRRARAPPSSSTSPP-----------WPEPALPAAARTAAAGRSLPHSWSSRL 352
>09_04_0245 +
15995689-15995742,15995979-15996075,15996165-15996185,
15996442-15996573,15996707-15996834,15996919-15997203,
15997391-15997521,15999700-15999817,16000609-16000703,
16001437-16001511,16001860-16001911,16002767-16002859,
16003625-16003690,16003785-16003867,16003942-16004054,
16005271-16005410,16005569-16005643,16006084-16006160,
16006426-16006514,16008039-16008085,16009004-16009138,
16009298-16009345,16009605-16009667,16009709-16009730,
16010284-16010458,16014250-16014321,16014887-16014958,
16015904-16016005,16016197-16016225,16016333-16016403,
16016549-16016597,16016684-16016784,16017495-16017623,
16017683-16017752,16017975-16018194,16019368-16019389,
16019457-16019604,16021569-16021693,16022344-16022774,
16022984-16023110,16023241-16023292,16023351-16023502
Length = 1461
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 274 APPVEADAGSAGDRQRLTHREPRVRAGSEAG 182
APP+ A +A DR LT REP + E G
Sbjct: 516 APPLHAQPAAASDRILLTRREPSMDQLKELG 546
>08_02_0819 -
21529913-21530064,21531016-21531082,21531284-21531373,
21531506-21531622,21532026-21532145,21532313-21533581
Length = 604
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 150 AGGRR-TSPRSRPASDPARTRGSL*VRRCRSPALP-ASASTGGAS 278
AG RR + R + PA + VRRC SP+L ASA+ G AS
Sbjct: 34 AGRRREVASRFKSGGTPAPQAAASSVRRCTSPSLSRASAAEGTAS 78
>01_01_0653 -
4981517-4981738,4981841-4981976,4982066-4982121,
4982228-4982284,4982373-4982450,4982533-4982619,
4982707-4982767,4982862-4982950,4983048-4983145,
4983242-4983341,4983983-4984042
Length = 347
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 661 SVDQLLDNKTDVIIFQKLRGSHCLXVVPGRHVL 759
SVD+L+D DV+ F L CL V G ++L
Sbjct: 100 SVDELVDQVADVLDFFGLGSVMCLGVTAGAYIL 132
>10_08_1019 -
22299800-22299946,22300040-22300109,22300930-22301066,
22301142-22301195,22301638-22301694,22301814-22301846,
22301942-22302067,22302162-22302815,22303042-22303166,
22303770-22303935
Length = 522
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 132 FRCFPRAGGRRTSPRSRPASDP 197
F C PR+G T PR+ P+S P
Sbjct: 152 FACIPRSGAPLTRPRTAPSSVP 173
>09_04_0741 -
19852339-19852497,19853185-19853246,19853352-19853415,
19853561-19853614,19853744-19853890,19854460-19854564,
19854651-19854794,19854987-19855093,19855613-19855712,
19855804-19855833,19856492-19856608,19856705-19856828,
19857143-19857189,19857272-19857400,19857777-19857852,
19858446-19858543,19858630-19858671,19858811-19859044
Length = 612
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 237 SPALPASASTGGASLPSCWSPTLSC 311
+PA P++A+ G LP+CW ++C
Sbjct: 9 APASPSAAAALGFLLPTCWEIEVTC 33
>04_03_0831 -
20133298-20133401,20133500-20133586,20133984-20134092,
20134272-20134442,20136059-20136208,20136765-20136872,
20137725-20137780,20138061-20138124,20138198-20138209
Length = 286
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = -1
Query: 397 ENNKLLYKIMNTEHTMYLKLDKSVDGXRRQESVGLQQLGREAPPVEADAGSAG 239
+ +L +++++E + LD S+ + LQQ+ + PP ADA + G
Sbjct: 151 DETSILAQVLSSESAISSLLDMSIRSLPGDHGLPLQQVLPDVPPAMADAVNRG 203
>02_04_0366 -
22389591-22390527,22391296-22391429,22391762-22391816,
22392364-22393225,22393342-22393459,22393647-22393737,
22394627-22394670
Length = 746
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = -1
Query: 493 TPISTGTTTAWPGETAKDKTSHRMSWKLIPVWENNKLLYKIMNTEHTMYLKLDKSVD 323
+P T T+A P T + +M KL+P+W L + + + T ++ +D
Sbjct: 450 SPAKTNQTSAAPAATVTEVEEVKMVVKLLPIWSTCILFWTVYSQMTTFSVEQATRMD 506
>02_01_0166 + 1154695-1156569
Length = 624
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 592 IVVSGGPQLVRVCEHVRFSCVQXSVDQLLD--NKTDVIIFQKLRGSHC 729
++ + P V +CEH + + QLLD +K DV F+ L HC
Sbjct: 339 LIAAYNPVFVYLCEHGKTKKARMLFGQLLDRRSKVDVPAFKTLILGHC 386
>06_03_1496 -
30567968-30568210,30568345-30568513,30568635-30568736,
30569087-30571855,30572402-30572430,30572546-30572659,
30572735-30572846,30574730-30574845,30574928-30575068,
30575121-30575243,30575346-30575478,30575842-30575972,
30576065-30576300,30577073-30577376
Length = 1573
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 462 QAVVVPVEMGVQLQSLIVMSSDDFHPFLLGDQI*LLKGKS 581
+ V++P++ GV L + + D H FLLG + +L+ K+
Sbjct: 77 ERVLLPIDPGVVLLDIAFVPDDPSHGFLLGTRQTILETKN 116
>06_01_0657 + 4767803-4768114,4768394-4768471,4768763-4768786
Length = 137
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -1
Query: 310 QESVGLQQLGREAPPVEADAGSAGDRQRLTHREPRVRAGSEAGRERGLVR 161
QESV L + +P E + G +R R RE + GSE +E+G R
Sbjct: 27 QESVSPSILSKASPRREGE-GRKEERGRCLQRERKEACGSENKKEKGRER 75
>04_04_0232 + 23794109-23794399,23795290-23796621
Length = 540
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 249 PASASTGGASLPSCWS 296
PASA+ GG+ P CWS
Sbjct: 419 PASAAAGGSRRPPCWS 434
>04_03_0640 + 18257612-18257787,18257831-18257906,18259105-18260556
Length = 567
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -2
Query: 312 DRKAWGSNNSEEKRHLWKLTPVVLETGNVLLIENHEYGQGLKLDAS 175
DR W S+ E RHL ++ V + + LL E + Y +K++AS
Sbjct: 192 DRLEWHSHRETEARHLRQIKDAVYDAED-LLDEYNYYALKVKVEAS 236
>06_03_0479 -
21289903-21290124,21290207-21290342,21290435-21290490,
21290734-21290811,21290902-21290988,21291067-21291127,
21291220-21291308,21291448-21291545,21291655-21291754,
21293968-21294030
Length = 329
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 661 SVDQLLDNKTDVIIFQKLRGSHCLXVVPGRHVL 759
SVD+L D +DV+ F L CL V G ++L
Sbjct: 101 SVDELADQVSDVLDFFGLGPVMCLGVTAGAYIL 133
>02_04_0619 -
24481641-24482291,24482426-24482640,24482770-24483154,
24483170-24483258,24485488-24485622,24485833-24487108
Length = 916
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = -2
Query: 636 MFAYADKLWSAGH--HDIVNDFFPSEVKFD 553
++AY D+L A H +++D+FP V+FD
Sbjct: 843 VYAYQDQLDDARHTPDGVISDYFPGCVRFD 872
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,669,743
Number of Sequences: 37544
Number of extensions: 451395
Number of successful extensions: 1758
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1756
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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