Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_O15
         (799 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80217-5|CAB02291.1|  208|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical pr...    29   3.9  
AC006709-1|AAF60432.2|  256|Caenorhabditis elegans Hypothetical ...    29   3.9  
Z83223-6|CAB05719.1|  884|Caenorhabditis elegans Hypothetical pr...    29   5.1  
Z81538-6|CAB04387.1|  884|Caenorhabditis elegans Hypothetical pr...    29   5.1  
Z78418-1|CAB01696.1|  245|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z81042-5|CAD44090.1|  331|Caenorhabditis elegans Hypothetical pr...    28   8.9  
Z70034-7|CAA93856.1|  855|Caenorhabditis elegans Hypothetical pr...    28   8.9  
AC024775-8|AAK68458.1|  347|Caenorhabditis elegans Hypothetical ...    28   8.9  

>Z80217-5|CAB02291.1|  208|Caenorhabditis elegans Hypothetical
           protein F37B1.5 protein.
          Length = 208

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -2

Query: 621 DKLWSAGHHDIVNDFFPSEVKFDHQARKGENHRKTLQSSSEAGLPSR 481
           ++ W    HD+  DF     KF  + R G++  +  +  SE  LP+R
Sbjct: 85  EEAWVDAVHDLFKDFLAEFKKFAAERRSGKSAEEVEKFRSEFFLPAR 131


>U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical
           protein C16A3.3 protein.
          Length = 1743

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = +3

Query: 135 RCFPRAGGR-RTSPRSRPASDPARTRGSL*VRRCRSPALPASASTGGASLPSCWSP 299
           +CFPR GG  +  P ++  SD   T+G L     R  A P       A   S W P
Sbjct: 11  KCFPRGGGSDKPKPLNKSNSDFVGTKGGL----KRKSAAPEQHEAKKAKEESSWIP 62


>AC006709-1|AAF60432.2|  256|Caenorhabditis elegans Hypothetical
           protein Y119C1A.1 protein.
          Length = 256

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -2

Query: 597 HDIVNDFFPSEVKFDHQARKGENHRKTLQSSSEAGLPSRLVQRPP 463
           H +VND   +E + +   RK E   K L++ S  G+P     RPP
Sbjct: 155 HTLVNDAATNEEELERTVRKLEEKLKRLRAKSAKGVPP---PRPP 196


>Z83223-6|CAB05719.1|  884|Caenorhabditis elegans Hypothetical
           protein E01G4.6 protein.
          Length = 884

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +2

Query: 146 QSRRSPYQSTLASSFRPCPYSWFSMSKTLPVSSTTGVSFHRWRF 277
           QS R PY++      RP  Y+   +++ L ++ST  +S  R RF
Sbjct: 204 QSLRDPYRNAGVPFLRPDAYTEARITRRLALTSTATLSQRRERF 247


>Z81538-6|CAB04387.1|  884|Caenorhabditis elegans Hypothetical
           protein E01G4.6 protein.
          Length = 884

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +2

Query: 146 QSRRSPYQSTLASSFRPCPYSWFSMSKTLPVSSTTGVSFHRWRF 277
           QS R PY++      RP  Y+   +++ L ++ST  +S  R RF
Sbjct: 204 QSLRDPYRNAGVPFLRPDAYTEARITRRLALTSTATLSQRRERF 247


>Z78418-1|CAB01696.1|  245|Caenorhabditis elegans Hypothetical
           protein F25D7.1 protein.
          Length = 245

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +3

Query: 291 WSPTLSCLRYPSTLLSSFRYIVCSVFIILYSSLLFSHT 404
           W P  + + YP T  + F +++   F+  YS  L S T
Sbjct: 52  WRPLTALIYYPVTPQTGFHWLMMCYFLYNYSKALESET 89


>Z81042-5|CAD44090.1|  331|Caenorhabditis elegans Hypothetical
           protein C27H6.4b protein.
          Length = 331

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 494 DSHLDWYNDRLAWGDSQGQD*SQNELEAYS 405
           D+  DWY D  A+GDS+    S ++  A+S
Sbjct: 75  DAEEDWYTDDRAFGDSKSLSRSLSQTTAHS 104


>Z70034-7|CAA93856.1|  855|Caenorhabditis elegans Hypothetical
           protein C18E9.7 protein.
          Length = 855

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 19/63 (30%), Positives = 25/63 (39%)
 Frame = -1

Query: 442 DKTSHRMSWKLIPVWENNKLLYKIMNTEHTMYLKLDKSVDGXRRQESVGLQQLGREAPPV 263
           D    R  + L+    NNK + K +  EH       K + G   Q SV     G  + PV
Sbjct: 504 DPEQGRFDYYLLTFSGNNKNISKKVEMEHEKSFTFTKLIPGKTYQFSVYTVYKGVRSRPV 563

Query: 262 EAD 254
            AD
Sbjct: 564 TAD 566


>AC024775-8|AAK68458.1|  347|Caenorhabditis elegans Hypothetical
           protein Y41D4A.8 protein.
          Length = 347

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 176 LASSFRPCPYSWFSMSKTLPVSSTTGVSFHRW 271
           ++ S  PC Y     ++T  V  T GVS HR+
Sbjct: 137 ISYSVTPCMYGLMMTAQTCSVFMTVGVSVHRY 168


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,812,016
Number of Sequences: 27780
Number of extensions: 350370
Number of successful extensions: 1113
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1113
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)