Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_O13
(783 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0001 + 13611070-13611172,13611812-13611873,13612001-136120... 51 9e-07
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531... 45 6e-05
08_01_0871 + 8502396-8502417,8503606-8503732,8503891-8503990,850... 42 4e-04
04_04_1062 - 30498158-30498271,30498358-30498518,30498606-304989... 40 0.002
05_01_0383 + 2990812-2990855,2991364-2991463,2991554-2991622,299... 30 1.8
05_01_0018 + 125697-126130,126231-126356,126726-126825,126950-12... 30 1.8
04_03_0205 + 12649724-12650191,12651493-12652025,12652114-126522... 30 1.8
04_04_0924 - 29449285-29449290,29449386-29449575,29449669-294497... 29 4.2
04_04_0464 - 25405629-25405665,25406644-25406710,25408112-254083... 28 7.3
>03_03_0001 +
13611070-13611172,13611812-13611873,13612001-13612072,
13612158-13612394,13612473-13612650,13612731-13612863,
13613686-13613845,13613925-13614078,13614159-13614262,
13614354-13614512,13615399-13615467,13615543-13615611,
13615772-13615909,13616044-13616124,13616805-13616933,
13617717-13617864,13618007-13618017,13618094-13618234,
13618314-13618439,13619164-13619220,13619355-13619453,
13619540-13619762,13620236-13620480,13621325-13621438
Length = 1003
Score = 51.2 bits (117), Expect = 9e-07
Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 2/151 (1%)
Frame = -1
Query: 594 HHGRGRVDIVD--KYSSDVDVQKFFTALGSGVKDLVPDESTGGDDQEFERNEASNVILSE 421
H+G V IVD K ++ D +F+ G + ++ DD E L
Sbjct: 208 HNGVCDVAIVDDGKLQAESDSGEFWVLFGGFAP--IGKKAICDDDVVLETTAPK---LYS 262
Query: 420 VSDATGKIKVTPLSKPFKQENLSPQNAYILDTISGNIYVWIGKQATANEKSQAMTKAQEL 241
+++ K++ T L+K + N +++D S ++++W+G+ E+ A +E
Sbjct: 263 INNGQLKLEDTVLTKSILENN----KCFLVDCGS-DLFIWVGRLTQVEERKAASAAVEEF 317
Query: 240 LGAKNYPSWVQVTRVLQNTEPAAFKQYFFTW 148
+ +N P +VTRV+Q E FK F +W
Sbjct: 318 IATQNRPKTTRVTRVIQGYENHTFKSKFESW 348
Score = 47.6 bits (108), Expect = 1e-05
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Frame = -1
Query: 477 GGDDQEFERNEASNVI----LSEVSDATGKIKVTPLSKPFKQENLSPQNAYILDTISGNI 310
GG RN +V+ L S GK++VT + F Q++L ++ +LDT G +
Sbjct: 638 GGKQNYTSRNATHDVVREPHLYTFSLRNGKLEVTEIFN-FSQDDLLTEDMMVLDT-HGEV 695
Query: 309 YVWIGKQATANEKSQAMTKAQELLG-AKNYPSW---VQVTRVLQNTEPAAFKQYFFTW 148
+VW+G+ A EK +A Q+ A + S V + +V++ EP F+ Y F+W
Sbjct: 696 FVWMGQCVDAKEKQKAFEIGQKYAEHAAAFESLSPDVPLYKVVEGNEPCFFRTY-FSW 752
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = -2
Query: 782 MFQXKGKRXVXVRQVDPQIASMXKGDVFVLDXDNDIYVFVGEKAKNVEKLKAI 624
++ KGKR + V++V +S+ DVF+LD + IY F G + E+ KA+
Sbjct: 145 LYICKGKRAIRVKEVPFARSSLNHDDVFILDTEKKIYQFNGANSNIQERAKAL 197
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -1
Query: 405 GKIKVTPLSKPFKQENLSPQNAYILDTISGNIYVWIGKQATANEKSQAMTKAQEL 241
GK + PF + +L+ + +ILDT IY + G + E+++A+ Q L
Sbjct: 150 GKRAIRVKEVPFARSSLNHDDVFILDT-EKKIYQFNGANSNIQERAKALEAIQHL 203
>06_03_0999 -
26752410-26752523,26752601-26752830,26752914-26753169,
26753763-26753828,26753921-26754046,26754148-26754288,
26754377-26754387,26754523-26754670,26755326-26755454,
26755573-26755710,26755808-26755876,26755955-26756023,
26756565-26756720,26756885-26756985,26757068-26757215,
26757540-26757702,26757833-26757965,26758049-26758226,
26758330-26758572,26758664-26758732,26759063-26759187,
26759727-26759766,26760756-26760812,26762831-26762935
Length = 1004
Score = 45.2 bits (102), Expect = 6e-05
Identities = 24/73 (32%), Positives = 38/73 (52%)
Frame = -1
Query: 366 QENLSPQNAYILDTISGNIYVWIGKQATANEKSQAMTKAQELLGAKNYPSWVQVTRVLQN 187
+E L Y+LD S IYVW+G++ E+ +A + A+ELL N P + R+++
Sbjct: 333 RELLDSTKCYLLDCGS-EIYVWMGRETPLEERKRAGSAAEELLREVNRPK-SHIVRLMEG 390
Query: 186 TEPAAFKQYFFTW 148
E F+ F W
Sbjct: 391 FETVIFRSKFSKW 403
Score = 36.7 bits (81), Expect = 0.021
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = -2
Query: 782 MFQXKGKRXVXVRQVDPQIASMXKGDVFVLDXDNDIYVFVGEKAKNVEKLKAISFANQVR 603
+F +GK V V++V +S+ D+F+LD + I+ F G + E+ KA+ ++
Sbjct: 200 LFVCRGKHTVHVKEVPFARSSLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQYLK 259
Score = 29.9 bits (64), Expect = 2.4
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = -1
Query: 498 LVPDESTGGDDQEFERNEASN-VILSEVSDATGKIKVTPLSKPFKQENLSPQNAYILDTI 322
++P+E GG F E + ++ + GK V PF + +L+ + +ILDT
Sbjct: 175 IIPEE--GGIASGFRHTEINEREHVTRLFVCRGKHTVHVKEVPFARSSLNHDDIFILDTK 232
Query: 321 SGNIYVWIGKQATANEKSQAMTKAQEL 241
S I+ + G ++ E+++A+ Q L
Sbjct: 233 S-KIFQFNGSNSSIQERAKALEVVQYL 258
>08_01_0871 +
8502396-8502417,8503606-8503732,8503891-8503990,
8504725-8504793,8504870-8505043,8505196-8505373,
8505462-8505594,8505702-8505864,8507031-8507181,
8507266-8507366,8507633-8507788,8508105-8508173,
8508256-8508324,8508403-8508540,8508639-8508767,
8509013-8509053,8510019-8510106,8510199-8510339,
8510428-8510553,8510671-8510736,8510994-8511291,
8511387-8511595,8511689-8511802
Length = 953
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Frame = -1
Query: 405 GKIKVTPLSKPFKQENLSPQNAYILDTISGNIYVWIGKQATANEKSQAMTKAQELLG--- 235
G +K+ + F Q++L ++ +ILD S +I+VW+G+Q + QA+ ++ +
Sbjct: 633 GNLKIKEIYH-FTQDDLMTEDVFILDCHS-DIFVWVGQQVDVKVRLQALDIGEKFVKLDF 690
Query: 234 -AKNYPSWVQVTRVLQNTEPAAFKQYFFTW 148
+N S + +++ +EP F + FFTW
Sbjct: 691 LMENLSSDTPIFVIMEGSEPTFFTR-FFTW 719
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = -2
Query: 707 DVFVLDXDNDIYVFVGEKAKNVEKLKAISFANQ 609
DVF+LD +DI+V+VG++ +L+A+ +
Sbjct: 652 DVFILDCHSDIFVWVGQQVDVKVRLQALDIGEK 684
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = -2
Query: 725 ASMXKGDVFVLDXDNDIYVFVGEKAKNVEKLKAISFANQVR 603
+S+ D+F+LD + I+ F G + E+ KA+ ++
Sbjct: 170 SSLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQYIK 210
>04_04_1062 -
30498158-30498271,30498358-30498518,30498606-30498924,
30499412-30499477,30499601-30499726,30499821-30499961,
30500482-30500535,30501508-30501636,30501733-30501870,
30501993-30502061,30502135-30502203,30502468-30502623,
30503795-30503895,30503986-30504136,30504475-30504520,
30504539-30504637,30504796-30504928,30505018-30505195,
30505282-30505524,30505612-30505680,30505986-30506085,
30506898-30507007
Length = 923
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Frame = -1
Query: 372 FKQENLSPQNAYILDTISGNIYVWIGKQATANEKSQAMTKAQELL----GAKNYPSWVQV 205
F Q++L ++ ++LD + +++VW+G++ A +SQAM ++ L +N +
Sbjct: 622 FTQDDLMAEDIFVLDCRT-DLFVWVGQEVDAKLRSQAMDIGEKFLLHDFLMENLSQDTPI 680
Query: 204 TRVLQNTEPAAFKQYFFTW 148
V + +EP F + FFTW
Sbjct: 681 FIVTEGSEPQFFTR-FFTW 698
Score = 35.5 bits (78), Expect = 0.048
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = -2
Query: 782 MFQXKGKRXVXVRQVDPQIASMXKGDVFVLDXDNDIYVFVGEKAKNVEKLKAISFANQVR 603
++ +GK V V++V +S+ D+F+LD N I+ F G + E+ KA+ ++
Sbjct: 161 LYVCQGKHVVHVKEVPFVRSSLNHEDIFILDTANKIFQFNGSNSCIQERAKALEVVQYIK 220
>05_01_0383 +
2990812-2990855,2991364-2991463,2991554-2991622,
2991724-2991960,2992045-2992228,2992307-2992442,
2992529-2992691,2992958-2993108,2993154-2993278,
2993349-2993504,2993792-2993860,2993951-2994019,
2994127-2994264,2994626-2994773,2994856-2994866,
2995212-2995352,2995441-2995569,2995860-2995899,
2996020-2996348,2996902-2996919
Length = 818
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/60 (25%), Positives = 31/60 (51%)
Frame = -2
Query: 782 MFQXKGKRXVXVRQVDPQIASMXKGDVFVLDXDNDIYVFVGEKAKNVEKLKAISFANQVR 603
MF+ +G+ V +V +S+ VFV+D ++ I++F G + + KA+ ++
Sbjct: 137 MFRCEGEHVARVTEVPFSRSSLDHKAVFVVDTESKIFLFSGCNSSMQTRAKALDVVKHLK 196
>05_01_0018 +
125697-126130,126231-126356,126726-126825,126950-126969,
127118-127220,127331-127469,127577-127791,127873-128523
Length = 595
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -1
Query: 600 QDHHGRGRVDIVDKYSSDVDVQKFFTALGSGVKDLVPDESTG---GDDQEFERNEAS 439
Q HG V + Y D D ++F GSG +DL ++ T DQ+FE+ A+
Sbjct: 116 QSTHGAQSVALSGGYVDDEDHGEWFLYTGSGGRDLSGNKRTNKEQSSDQKFEKLNAA 172
>04_03_0205 +
12649724-12650191,12651493-12652025,12652114-12652239,
12652625-12652724,12652880-12652899,12653035-12653137,
12653213-12653351,12653448-12653662,12653772-12654320
Length = 750
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = -1
Query: 600 QDHHGRGRVDIVDKYSSDVDVQKFFTALGSGVKDLVPDESTGGD---DQEFERNEAS 439
Q HG V + Y D D ++F GSG +DL ++ T + DQ+FE+ A+
Sbjct: 305 QSTHGAQSVALSGGYLDDEDHGEWFLYTGSGGRDLSGNKRTSKEQSFDQKFEKLNAA 361
>04_04_0924 -
29449285-29449290,29449386-29449575,29449669-29449772,
29449845-29449976,29450064-29450162,29450439-29450451,
29450688-29450719,29450802-29450921,29450992-29451105,
29451192-29451325,29454014-29454251
Length = 393
Score = 29.1 bits (62), Expect = 4.2
Identities = 23/91 (25%), Positives = 39/91 (42%)
Frame = -1
Query: 594 HHGRGRVDIVDKYSSDVDVQKFFTALGSGVKDLVPDESTGGDDQEFERNEASNVILSEVS 415
H R +V+I + +SD D V DES+ DQ FE N+ + E
Sbjct: 83 HRKRSKVNISSESNSDNDCSLSSDNHDGDVHLSNHDESSDNHDQHFEENDPLLHLTKE-- 140
Query: 414 DATGKIKVTPLSKPFKQENLSPQNAYILDTI 322
+ K+K+ +PF ++ ++ D+I
Sbjct: 141 EHMKKLKIKLGKRPFTDDHKKKRHKVESDSI 171
>04_04_0464 -
25405629-25405665,25406644-25406710,25408112-25408373,
25408989-25409198,25409818-25410006,25410087-25410548,
25410889-25410936,25411972-25412301
Length = 534
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 415 RRHGKDQSDATIEAFQARELESTERVYFGHHIWQHLRLDREAG 287
R H D + E+ + R LE+ ER Y W+ L+ D E+G
Sbjct: 22 RNHEDDDDEEEEESGEGRVLEAWERAYADDRSWEALQED-ESG 63
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,912,917
Number of Sequences: 37544
Number of extensions: 367347
Number of successful extensions: 1151
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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