Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_O13
         (783 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.)             107   1e-23
SB_19295| Best HMM Match : No HMM Matches (HMM E-Value=.)              41   0.001
SB_4901| Best HMM Match : Gelsolin (HMM E-Value=0.83)                  39   0.005
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)              38   0.007
SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07)              35   0.065
SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024)               26   1.7  
SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35)              30   1.8  
SB_38792| Best HMM Match : 7tm_2 (HMM E-Value=2e-13)                   29   5.6  
SB_33670| Best HMM Match : DUF710 (HMM E-Value=3.5)                    29   5.6  
SB_24419| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.6  
SB_38328| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.4  
SB_55662| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.8  
SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032)                28   9.8  
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)         28   9.8  

>SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 313

 Score =  107 bits (257), Expect = 1e-23
 Identities = 59/155 (38%), Positives = 86/155 (55%), Gaps = 1/155 (0%)
 Frame = -1

Query: 603 DQDHHGRGRVDIVDKYSSDVDVQKFFTALGSGVKDLVPDESTGGDDQEFERNEASNVILS 424
           D++  GR +V I+D+        KFF ALGS   ++  D  T        R  A    LS
Sbjct: 94  DEERGGRAQVHIIDECKDKGLESKFFDALGSR-GEIAEDLGT----TRSLRKPARAPSLS 148

Query: 423 EVSDATGKIKVTPL-SKPFKQENLSPQNAYILDTISGNIYVWIGKQATANEKSQAMTKAQ 247
            +SDA+G++++  + +KP K+ NL   + +ILD  S  ++VW+GK  T NEKS AM    
Sbjct: 149 TMSDASGELEMREIEAKPLKKSNLDTNDCFILDCGSSGVFVWVGKGCTKNEKSAAMKNGI 208

Query: 246 ELLGAKNYPSWVQVTRVLQNTEPAAFKQYFFTWRD 142
           + +  K YP+W QVTRV++  E   FKQ+F  W D
Sbjct: 209 DFIEKKGYPNWTQVTRVVEGGETPIFKQFFSGWTD 243



 Score = 40.7 bits (91), Expect = 0.001
 Identities = 18/46 (39%), Positives = 28/46 (60%)
 Frame = -2

Query: 740 VDPQIASMXKGDVFVLDXDNDIYVFVGEKAKNVEKLKAISFANQVR 603
           V+    S+ KGDVF+LD   +IY + G +   VE++K I  A ++R
Sbjct: 48  VELHYKSLNKGDVFILDDGLNIYCWNGSQCSRVERMKGIDVAKRIR 93


>SB_19295| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 297

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
 Frame = -1

Query: 492 PDESTGGDDQEFERNEASNVILSEVSDATGKIKVTPLS--KPFKQENLSPQNAYILDTIS 319
           P    G     + R  A  V  S +SD TG+++   ++  K  K+  L   + YI D+  
Sbjct: 5   PAYFAGAPKGHYRRRAAGKV--SYLSDRTGQLQCNEIARGKEVKRSLLKEDDVYIFDS-G 61

Query: 318 GNIYVWIGKQATANEKSQAMTKAQELL 238
            + YV++GK A+ +E+  AMT A + L
Sbjct: 62  RHCYVYVGKAASIDERRNAMTYAHQPL 88



 Score = 30.3 bits (65), Expect = 1.8
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -2

Query: 719 MXKGDVFVLDXDNDIYVFVGEKAKNVEKLKAISFANQ 609
           + + DV++ D     YV+VG+ A   E+  A+++A+Q
Sbjct: 50  LKEDDVYIFDSGRHCYVYVGKAASIDERRNAMTYAHQ 86


>SB_4901| Best HMM Match : Gelsolin (HMM E-Value=0.83)
          Length = 60

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 21/61 (34%), Positives = 34/61 (55%)
 Frame = -1

Query: 339 YILDTISGNIYVWIGKQATANEKSQAMTKAQELLGAKNYPSWVQVTRVLQNTEPAAFKQY 160
           ++ DT   + YVW+G  A+ +E+ +AMT A   LG  ++P ++ VT V +  E   F   
Sbjct: 2   FLFDT-GCHCYVWVGAGASIDERGKAMTYAHNYLGQTDHP-FLPVTVVAEGKETNDFNSA 59

Query: 159 F 157
           F
Sbjct: 60  F 60


>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
          Length = 1866

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 15/54 (27%), Positives = 31/54 (57%)
 Frame = -2

Query: 767  GKRXVXVRQVDPQIASMXKGDVFVLDXDNDIYVFVGEKAKNVEKLKAISFANQV 606
            G+R +  R ++P   S   GD +VL   ++++ +VG+ A  +E+ K    A+++
Sbjct: 1457 GRRNIQTRLIEPCQKSFNSGDCYVLVTKDELFAWVGKHANAIERAKVTEIASRI 1510


>SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07)
          Length = 546

 Score = 35.1 bits (77), Expect = 0.065
 Identities = 26/103 (25%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
 Frame = -1

Query: 456 ERNEASNVILSEVSDATGKIKVTPLSKPFKQENLSPQNAYILDTISGNIYVWIGKQATAN 277
           + +EA    L    +  G ++V  +   F Q++L   +   +D +  +IY+W+G++A  +
Sbjct: 321 QSSEAPEPRLFHCYNKRGSLEVEEIVN-FGQDDLVDDDVMFVD-LGDHIYMWVGEEAKKS 378

Query: 276 E--KSQAMTKAQELLGAKNYPSWVQV-TRVLQNTEPA-AFKQY 160
           E  ++Q   K +E +  K    WV++  R L+  + A +F Q+
Sbjct: 379 EVDETQEFIKVREYVSGKVRVPWVKIKERELRQIDVASSFGQF 421



 Score = 30.3 bits (65), Expect = 1.8
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
 Frame = -1

Query: 567 VDKYSSDVDVQKFFTALGSGVKDLVPDESTGGDDQEFERNEASNVILSEVSDATGKIK-- 394
           + K SSD DV      L +G    + ++ +   D+E E     +  L  VSDA G+I+  
Sbjct: 38  IKKMSSDEDVMAIRRLLKAGRNLGLGEKPSLISDEEAEEKYRGDTKLYRVSDAAGEIQEI 97

Query: 393 -VTPLSKPFKQENLS 352
              PL++    EN+S
Sbjct: 98  GERPLTQKLLDENVS 112


>SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024)
          Length = 693

 Score = 25.8 bits (54), Expect(2) = 1.7
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -1

Query: 234 AKNYPSWVQVTRVLQNTEPAAFKQYFFTWRD 142
           A   P+W  + R+ +  E   F++ F  W D
Sbjct: 115 ADTRPAWTLLARLHEKAETILFREKFLDWPD 145



 Score = 23.0 bits (47), Expect(2) = 1.7
 Identities = 13/78 (16%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
 Frame = -1

Query: 468 DQEFERNEASNVILSEV--SDATGKIKVTPLSKPFKQENLSPQNAYILDTISGNIYVWIG 295
           D+++E+      ++ +V  +D    + V        Q +L      ++      +YVW G
Sbjct: 8   DEDYEKGVTRTNMIYKVHWTDPPSLVPVETHCGRLPQISLLDTKEVLVFDFGSELYVWNG 67

Query: 294 KQATANEKSQAMTKAQEL 241
           +Q+ + ++       ++L
Sbjct: 68  QQSLSGQRKTVFALGKQL 85


>SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35)
          Length = 1078

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = -1

Query: 330 DTISGNIYVWIGKQATANEKSQAMTKAQEL-LGAKNYPSWVQVTRVLQNTEPAAFKQYF 157
           D +  +++ WIGK +T +E   A  K  EL +   + P  +Q  R +Q  E   FK YF
Sbjct: 517 DELKYDVHFWIGKDSTQDEYGTAAYKTVELDIHLNDKP--IQ-HREVQGFESKLFKSYF 572



 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -2

Query: 725 ASMXKGDVFVLDXDNDIYVFVGEKAKNVEKLKAI 624
           +S+   DVF+LD   ++Y++VG K    EK + +
Sbjct: 619 SSLCSEDVFILDKGLNLYLWVGVKCDKDEKFRGM 652



 Score = 28.7 bits (61), Expect = 5.6
 Identities = 12/47 (25%), Positives = 27/47 (57%)
 Frame = -1

Query: 366 QENLSPQNAYILDTISGNIYVWIGKQATANEKSQAMTKAQELLGAKN 226
           + +L  ++ +ILD    N+Y+W+G +   +EK + M +  ++   +N
Sbjct: 618 RSSLCSEDVFILDK-GLNLYLWVGVKCDKDEKFRGMQEILKIKSERN 663



 Score = 28.3 bits (60), Expect = 7.4
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -1

Query: 330  DTISGNIYVWIGKQATANEKSQAMTKAQELLGAKNYPSWVQVTRV 196
            D +  +++ WIGK +T +E   A  K  EL     YP  V+V  V
Sbjct: 906  DELKYDVHFWIGKDSTQDEYGTAAYKTVEL---DIYPKSVKVEEV 947



 Score = 27.9 bits (59), Expect = 9.8
 Identities = 21/74 (28%), Positives = 34/74 (45%)
 Frame = -1

Query: 597 DHHGRGRVDIVDKYSSDVDVQKFFTALGSGVKDLVPDESTGGDDQEFERNEASNVILSEV 418
           + +G+ + ++ D+ S   D   F+  L +  KD        GD   FE        L  +
Sbjct: 661 ERNGKPKSEVNDESSMKPD-DDFYKLLPNVSKDCEDSSFPKGDYDSFEPE------LYRI 713

Query: 417 SDATGKIKVTPLSK 376
           SDA+GKI+ T + K
Sbjct: 714 SDASGKIQKTQIKK 727


>SB_38792| Best HMM Match : 7tm_2 (HMM E-Value=2e-13)
          Length = 1287

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -1

Query: 501 DLVPDESTGGDDQEFERNEASNVILSEVSD 412
           ++VP E  G DDQ F R++  N++   +++
Sbjct: 94  EVVPGEELGSDDQVFPRHDNENLVSKTITN 123


>SB_33670| Best HMM Match : DUF710 (HMM E-Value=3.5)
          Length = 237

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = -1

Query: 357 LSPQNAYILDTISGNIYVWIGKQATANEKSQAMTKAQELLGA-KNYPSWVQVTRVLQNTE 181
           LSP +  + D +  N ++W+G   + ++  QA+  A + L A ++Y  + + + VLQN +
Sbjct: 60  LSPTDI-VRDVLKDNDFIWLG-SFSYDQMKQAIGSAYKSLRANRSYKRFRRFSSVLQNEQ 117

Query: 180 PAAFKQYF 157
             A K  F
Sbjct: 118 LDACKCKF 125


>SB_24419| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 196

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = -1

Query: 357 LSPQNAYILDTISGNIYVWIGKQATANEKSQAMTKAQELLGA-KNYPSWVQVTRVLQNTE 181
           LSP +  + D +  N ++W+G   + ++  QA+  A + L A ++Y  + + + VLQN +
Sbjct: 60  LSPTDI-VRDVLKDNDFIWLG-SFSYDQMKQAIGSAYKSLRANRSYKRFRRFSSVLQNEQ 117

Query: 180 PAAFKQYF 157
             A K  F
Sbjct: 118 LDACKCKF 125


>SB_38328| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 267

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -1

Query: 384 LSKPFKQENLSPQNAYILDTISGNIYVWIGKQATANEKSQAMTKA 250
           + +PF+Q NL P N  I        Y +I  + T   ++Q++  A
Sbjct: 139 MKRPFRQPNLQPNNGLITGDPRAMTYNYIQPKYTTYNQAQSVAAA 183


>SB_55662| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 159

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -1

Query: 594 HHGRGRVDIVDKYSSDVDVQKFFTALGSGVKDLVP 490
           H GR  + I+D YS D+++  +  ++G  +K  VP
Sbjct: 39  HEGRHYLHIIDYYSRDIEI--YLLSMGRKLKTRVP 71


>SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032)
          Length = 675

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/39 (28%), Positives = 24/39 (61%)
 Frame = -2

Query: 725 ASMXKGDVFVLDXDNDIYVFVGEKAKNVEKLKAISFANQ 609
           + +   DVF++D  +  YV+ G+ +   E+ +A+ FA++
Sbjct: 594 SQLNTNDVFIMDSGDHCYVWSGKGSSVDERRRAMEFAHR 632


>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
          Length = 1531

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = -1

Query: 315 NIYVWIGKQATANEKSQAMTKAQELLGAKNYPSWVQVT-RVLQNTEPAAFKQYF 157
           +++ WIG+ +T +E   A  K  EL     Y + V V  R + N E   FK YF
Sbjct: 568 DLHFWIGRGSTQDEYGTAAYKTVEL---DTYLNDVPVQHREIMNHESDMFKTYF 618


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,453,920
Number of Sequences: 59808
Number of extensions: 400665
Number of successful extensions: 1402
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1400
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2143884611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)