Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_O13
         (783 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   2.0  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    24   4.6  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    24   4.6  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    24   6.1  
AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.       24   6.1  
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       24   6.1  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   8.1  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -2

Query: 644 VEKLKAISFANQVRIRIITDAEE 576
           +E+L+ I  A + R+R+ITD +E
Sbjct: 309 LERLRGICLAARERLRLITDLQE 331


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +2

Query: 275 SFAVACFPIQT*MLPDMVSKIYAFCGLKFSCLKGFDS 385
           SF++A FPI    +P  V+ +  FCGL+ + +  FD+
Sbjct: 59  SFSMA-FPINL-AVPVTVTLLLVFCGLREADVCAFDN 93


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
 Frame = +1

Query: 241  QFLSFRHGL--RFLVCGSLLPDP 303
            Q L+ RH L  RFL C   LPDP
Sbjct: 1055 QQLALRHKLVERFLPCYRYLPDP 1077


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -2

Query: 746 RQVDPQIASMXKGDVFVLDXDNDIYVFVGEKAKNVEK 636
           ++ +PQI      D F  D D+D    VG++ ++ E+
Sbjct: 311 KKTNPQIVEYEFDDDFPFDDDSDFDDDVGDRLESEEE 347


>AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -2

Query: 746 RQVDPQIASMXKGDVFVLDXDNDIYVFVGEKAKNVEK 636
           ++ +PQI      D F  D D+D    VG++ ++ E+
Sbjct: 81  KKTNPQIVEYEFDDDFPFDDDSDFDDDVGDRLESEEE 117


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -2

Query: 746 RQVDPQIASMXKGDVFVLDXDNDIYVFVGEKAKNVEK 636
           ++ +PQI      D F  D D+D    VG++ ++ E+
Sbjct: 81  KKTNPQIVEYEFDDDFPFDDDSDFDDDVGDRLESEEE 117


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 564 PQYRLFRVRDDPDPYLIGERNRFKLLNVF 650
           P++RL+       PYL  +RN F+ L+ F
Sbjct: 108 PKFRLYVGIVYVPPYLSSDRNYFESLSAF 136


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,351
Number of Sequences: 2352
Number of extensions: 12800
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)