Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_O12
         (840 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       26   0.43 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   3.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.2  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 25.8 bits (54), Expect = 0.43
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 477 NDTRTHSFPGHEETYSNTNKLINRTH 554
           +DTRTH F      YS   K+I + H
Sbjct: 414 SDTRTHQFAKFMPLYSGPYKIIAKPH 439


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 17/63 (26%), Positives = 26/63 (41%)
 Frame = +2

Query: 185 KLSYY*HTHYNMKKQKCLILNKRFNCFITSQE*KRTFLGSGVTSLSEIISSGYGRRGNDT 364
           +L  +  TH   K+  C I NKRF       +  +T  G+G    S+  S       +D 
Sbjct: 361 ELQRHLRTHTGEKRFACPICNKRFMRSDHLAKHVKTHNGNGKKGSSDSCSDSEENSQSDI 420

Query: 365 TTD 373
           T +
Sbjct: 421 TNN 423


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = +3

Query: 447  FHSHKTKNCKNDTRTHSFPGHEETYSNTNKLIN 545
            FH H  K   +    + +PG    Y N N  +N
Sbjct: 2515 FHGHWDKQTGHVAPLYYYPGDVYDYFNANFSLN 2547


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 111 CQSCDIPHRV 82
           C+SCD+ HR+
Sbjct: 213 CKSCDLHHRL 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,260
Number of Sequences: 336
Number of extensions: 3772
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)