Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_O12
         (840 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC038669-1|AAH38669.1|  466|Homo sapiens SP8 protein protein.          33   1.7  
AY167048-1|AAO38029.1|  490|Homo sapiens specificity protein 8 s...    32   2.3  
AY167047-1|AAO38028.1|  508|Homo sapiens specificity protein 8 l...    32   2.3  
AK056857-1|BAB71297.1|  452|Homo sapiens protein ( Homo sapiens ...    32   2.3  

>BC038669-1|AAH38669.1|  466|Homo sapiens SP8 protein protein.
          Length = 466

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 22/72 (30%), Positives = 33/72 (45%)
 Frame = +2

Query: 185 KLSYY*HTHYNMKKQKCLILNKRFNCFITSQE*KRTFLGSGVTSLSEIISSGYGRRGNDT 364
           +L  +  TH   K+  C + NKRF       +  +T  G G    S    SG G++G+DT
Sbjct: 378 ELQRHLRTHTGEKRFACPVCNKRFMRSDRLSKHVKTHSGGGGGGGSAGSGSG-GKKGSDT 436

Query: 365 TTDHRNTGD*LC 400
            ++H   G   C
Sbjct: 437 DSEHSAAGSPPC 448


>AY167048-1|AAO38029.1|  490|Homo sapiens specificity protein 8
           short isoform protein.
          Length = 490

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 22/72 (30%), Positives = 33/72 (45%)
 Frame = +2

Query: 185 KLSYY*HTHYNMKKQKCLILNKRFNCFITSQE*KRTFLGSGVTSLSEIISSGYGRRGNDT 364
           +L  +  TH   K+  C + NKRF       +  +T  G G    S    SG G++G+DT
Sbjct: 402 ELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHVKTHSGGGGGGGSAGSGSG-GKKGSDT 460

Query: 365 TTDHRNTGD*LC 400
            ++H   G   C
Sbjct: 461 DSEHSAAGSPPC 472


>AY167047-1|AAO38028.1|  508|Homo sapiens specificity protein 8 long
           isoform protein.
          Length = 508

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 22/72 (30%), Positives = 33/72 (45%)
 Frame = +2

Query: 185 KLSYY*HTHYNMKKQKCLILNKRFNCFITSQE*KRTFLGSGVTSLSEIISSGYGRRGNDT 364
           +L  +  TH   K+  C + NKRF       +  +T  G G    S    SG G++G+DT
Sbjct: 420 ELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHVKTHSGGGGGGGSAGSGSG-GKKGSDT 478

Query: 365 TTDHRNTGD*LC 400
            ++H   G   C
Sbjct: 479 DSEHSAAGSPPC 490


>AK056857-1|BAB71297.1|  452|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32295 fis, clone PROST2001823, weakly similar to
           TRANSCRIPTION FACTOR SP1. ).
          Length = 452

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 22/72 (30%), Positives = 33/72 (45%)
 Frame = +2

Query: 185 KLSYY*HTHYNMKKQKCLILNKRFNCFITSQE*KRTFLGSGVTSLSEIISSGYGRRGNDT 364
           +L  +  TH   K+  C + NKRF       +  +T  G G    S    SG G++G+DT
Sbjct: 364 ELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHVKTHSGGGGGGGSAGSGSG-GKKGSDT 422

Query: 365 TTDHRNTGD*LC 400
            ++H   G   C
Sbjct: 423 DSEHSAAGSPPC 434


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,886,805
Number of Sequences: 237096
Number of extensions: 1933969
Number of successful extensions: 2915
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2912
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)