Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_O12
         (840 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g06990.1 68416.m00830 DC1 domain-containing protein contains ...    30   1.7  
At3g06035.1 68416.m00689 expressed protein                             29   3.8  
At2g19660.1 68415.m02297 DC1 domain-containing protein contains ...    29   3.8  
At4g01730.1 68417.m00224 zinc finger (DHHC type) family protein ...    28   6.7  
At3g25250.1 68416.m03154 protein kinase family protein contains ...    28   6.7  

>At3g06990.1 68416.m00830 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 539

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1

Query: 511 KKLTATPINSLIEHMQKEGGASTCSYEL*INTCA 612
           K+    P N  +E++Q +GG    SY+  INTCA
Sbjct: 5   KQKVKIPCNHPLEYIQLKGGGWPGSYDYDINTCA 38


>At3g06035.1 68416.m00689 expressed protein
          Length = 200

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 459 KTKNCKNDTRTHSFPGHEETYSNTNKLINRTH 554
           K K C NDT + + PG E  ++N  +++ + H
Sbjct: 66  KNKPCTNDTGSATVPGTEPQFANYPQILAKCH 97


>At2g19660.1 68415.m02297 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 662

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = +2

Query: 23  YHFPILLSS-TSNGYYCRLKCTR*GISHD*QARYAECGVCGIQ*NAHVSCTTLYFKLSYY 199
           +  PI LS  T +G+    K  + G+     A + +C  C ++   HV CT L+ + S+ 
Sbjct: 122 HEHPIQLSDGTRDGFVQLCKTCKWGVF---DAVHYKCNKCDLR--FHVECTKLFPQASHV 176

Query: 200 *HTHYNMKKQKC 235
            H  + +K  +C
Sbjct: 177 LHPQHPLKLLRC 188


>At4g01730.1 68417.m00224 zinc finger (DHHC type) family protein
           contains Pfam profile PF01529: DHHC zinc finger domain
          Length = 499

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -1

Query: 348 LPYPLDIISDKEVTPDPKK 292
           LP+PL +  D  VTPDPK+
Sbjct: 126 LPFPLVMKDDDSVTPDPKE 144


>At3g25250.1 68416.m03154 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 421

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = -1

Query: 309 TPDPKKVLFYSCEVMKQLKRLFRIKHFC 226
           TP P   L      MK+ KRLFR   FC
Sbjct: 178 TPQPSPSLSKPSPTMKRKKRLFRFTSFC 205


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,376,008
Number of Sequences: 28952
Number of extensions: 291343
Number of successful extensions: 582
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1941125600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)