Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_O11
(865 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 270 8e-73
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 270 8e-73
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 270 1e-72
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 270 1e-72
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 270 1e-72
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 267 7e-72
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 168 4e-42
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 98 8e-21
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 96 3e-20
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 95 4e-20
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 95 4e-20
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 95 4e-20
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 95 4e-20
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 93 2e-19
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 93 2e-19
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 93 3e-19
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 53 2e-07
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 50 2e-06
At5g33320.1 68418.m03955 triose phosphate/phosphate translocator... 33 0.32
At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 1.7
At5g58300.1 68418.m07298 leucine-rich repeat transmembrane prote... 29 4.0
At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to ... 29 5.3
At5g15840.1 68418.m01853 zinc finger protein CONSTANS (CO) ident... 28 7.0
At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 28 7.0
At1g68080.1 68414.m07777 expressed protein 28 7.0
At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase... 28 7.0
At4g13930.1 68417.m02156 glycine hydroxymethyltransferase, putat... 28 9.2
At3g26855.1 68416.m03360 hypothetical protein 28 9.2
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 270 bits (662), Expect = 8e-73
Identities = 134/239 (56%), Positives = 156/239 (65%), Gaps = 2/239 (0%)
Frame = -2
Query: 843 MVDNXAIXDXCRRXFXIEXPNXHQP*FFXRTDCLLDHCXFEIRRRSEXGPHXSSRXXGAL 664
++DN AI D CRR IE P ++ +R + L
Sbjct: 203 LLDNEAIYDICRRSLDIERPTYTN--LNRLISQIISSLTTSLRFDGAINVDITEFQTN-L 259
Query: 663 XPVSTSHWSRTRQSSL--PRRPTMNSFPSPRSQTHASSPPTRW*NATPRHGKYMACCMLY 490
P H+ + + + + P P + PRHGKYMACC++Y
Sbjct: 260 VPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMY 319
Query: 489 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 310
RGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+S
Sbjct: 320 RGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMIS 379
Query: 309 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 133
N TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 380 NNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
Score = 82.2 bits (194), Expect = 4e-16
Identities = 39/54 (72%), Positives = 41/54 (75%)
Frame = -1
Query: 688 EFQXXWCLXPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 527
EFQ PRIHF L +YAPVISA KAYHEQLSV EITNA FEPA+ M KCDP
Sbjct: 254 EFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDP 307
Score = 38.3 bits (85), Expect = 0.007
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -3
Query: 782 TXTNXDFXIGQIVSSITAXLRFDGALXXDLT 690
T TN + I QI+SS+T LRFDGA+ D+T
Sbjct: 223 TYTNLNRLISQIISSLTTSLRFDGAINVDIT 253
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 270 bits (662), Expect = 8e-73
Identities = 134/239 (56%), Positives = 156/239 (65%), Gaps = 2/239 (0%)
Frame = -2
Query: 843 MVDNXAIXDXCRRXFXIEXPNXHQP*FFXRTDCLLDHCXFEIRRRSEXGPHXSSRXXGAL 664
++DN AI D CRR IE P ++ +R + L
Sbjct: 203 LLDNEAIYDICRRSLDIERPTYTN--LNRLISQIISSLTTSLRFDGAINVDITEFQTN-L 259
Query: 663 XPVSTSHWSRTRQSSL--PRRPTMNSFPSPRSQTHASSPPTRW*NATPRHGKYMACCMLY 490
P H+ + + + + P P + PRHGKYMACC++Y
Sbjct: 260 VPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMY 319
Query: 489 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 310
RGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+S
Sbjct: 320 RGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMIS 379
Query: 309 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 133
N TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 380 NNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
Score = 82.2 bits (194), Expect = 4e-16
Identities = 39/54 (72%), Positives = 41/54 (75%)
Frame = -1
Query: 688 EFQXXWCLXPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 527
EFQ PRIHF L +YAPVISA KAYHEQLSV EITNA FEPA+ M KCDP
Sbjct: 254 EFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDP 307
Score = 38.3 bits (85), Expect = 0.007
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -3
Query: 782 TXTNXDFXIGQIVSSITAXLRFDGALXXDLT 690
T TN + I QI+SS+T LRFDGA+ D+T
Sbjct: 223 TYTNLNRLISQIISSLTTSLRFDGAINVDIT 253
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 270 bits (661), Expect = 1e-72
Identities = 119/144 (82%), Positives = 131/144 (90%)
Frame = -2
Query: 564 ASSPPTRW*NATPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG 385
A P + PRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK G
Sbjct: 295 AFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCG 354
Query: 384 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 205
INYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGME
Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGME 414
Query: 204 EGEFSEAREDLAALEKDYEEVGMD 133
EGEFSEAREDLAALEKDYEEVG +
Sbjct: 415 EGEFSEAREDLAALEKDYEEVGAE 438
Score = 84.2 bits (199), Expect = 1e-16
Identities = 39/54 (72%), Positives = 43/54 (79%)
Frame = -1
Query: 688 EFQXXWCLXPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 527
EFQ PRIHF L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M KCDP
Sbjct: 254 EFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP 307
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = -3
Query: 782 TXTNXDFXIGQIVSSITAXLRFDGALXXDLT 690
T TN + + Q++SS+TA LRFDGAL D+T
Sbjct: 223 TYTNLNRLVSQVISSLTASLRFDGALNVDVT 253
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 270 bits (661), Expect = 1e-72
Identities = 119/144 (82%), Positives = 131/144 (90%)
Frame = -2
Query: 564 ASSPPTRW*NATPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG 385
A P + PRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK G
Sbjct: 295 AFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCG 354
Query: 384 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 205
INYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGME
Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGME 414
Query: 204 EGEFSEAREDLAALEKDYEEVGMD 133
EGEFSEAREDLAALEKDYEEVG +
Sbjct: 415 EGEFSEAREDLAALEKDYEEVGAE 438
Score = 84.2 bits (199), Expect = 1e-16
Identities = 39/54 (72%), Positives = 43/54 (79%)
Frame = -1
Query: 688 EFQXXWCLXPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 527
EFQ PRIHF L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M KCDP
Sbjct: 254 EFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP 307
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = -3
Query: 782 TXTNXDFXIGQIVSSITAXLRFDGALXXDLT 690
T TN + + Q++SS+TA LRFDGAL D+T
Sbjct: 223 TYTNLNRLVSQVISSLTASLRFDGALNVDVT 253
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 270 bits (661), Expect = 1e-72
Identities = 119/144 (82%), Positives = 131/144 (90%)
Frame = -2
Query: 564 ASSPPTRW*NATPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG 385
A P + PRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK G
Sbjct: 295 AFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCG 354
Query: 384 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 205
INYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGME
Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGME 414
Query: 204 EGEFSEAREDLAALEKDYEEVGMD 133
EGEFSEAREDLAALEKDYEEVG +
Sbjct: 415 EGEFSEAREDLAALEKDYEEVGAE 438
Score = 84.2 bits (199), Expect = 1e-16
Identities = 39/54 (72%), Positives = 43/54 (79%)
Frame = -1
Query: 688 EFQXXWCLXPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 527
EFQ PRIHF L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M KCDP
Sbjct: 254 EFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP 307
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = -3
Query: 782 TXTNXDFXIGQIVSSITAXLRFDGALXXDLT 690
T TN + + Q++SS+TA LRFDGAL D+T
Sbjct: 223 TYTNLNRLVSQVISSLTASLRFDGALNVDVT 253
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 267 bits (654), Expect = 7e-72
Identities = 133/237 (56%), Positives = 153/237 (64%), Gaps = 2/237 (0%)
Frame = -2
Query: 843 MVDNXAIXDXCRRXFXIEXPNXHQP*FFXRTDCLLDHCXFEIRRRSEXGPHXSSRXXGAL 664
++DN AI D CRR IE P + +R + L
Sbjct: 203 LLDNEAIYDICRRSLDIERPTYSN--LNRLISQTISSLTTSLRFDGAINVDITEFQTN-L 259
Query: 663 XPVSTSHWSRTRQSSL--PRRPTMNSFPSPRSQTHASSPPTRW*NATPRHGKYMACCMLY 490
P H+ + + + + F P T P PRHGKYMACC++Y
Sbjct: 260 VPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSNMMAKCDPRHGKYMACCLMY 319
Query: 489 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 310
RGDVVPKDVN A+A IK KRTIQFVDWCPTGFK GINYQPP+VVPGGDLAKVQRAVCM+S
Sbjct: 320 RGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMIS 379
Query: 309 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 139
N TA+AE ++R+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG
Sbjct: 380 NNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 436
Score = 76.6 bits (180), Expect = 2e-14
Identities = 35/54 (64%), Positives = 39/54 (72%)
Frame = -1
Query: 688 EFQXXWCLXPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 527
EFQ PRIHF L +YAPVIS+ KAYHEQ SV EIT + FEP+N M KCDP
Sbjct: 254 EFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSNMMAKCDP 307
Score = 34.7 bits (76), Expect = 0.080
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -3
Query: 782 TXTNXDFXIGQIVSSITAXLRFDGALXXDLT 690
T +N + I Q +SS+T LRFDGA+ D+T
Sbjct: 223 TYSNLNRLISQTISSLTTSLRFDGAINVDIT 253
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 168 bits (409), Expect = 4e-42
Identities = 73/92 (79%), Positives = 81/92 (88%)
Frame = -2
Query: 564 ASSPPTRW*NATPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG 385
A P + PRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK G
Sbjct: 295 AFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCG 354
Query: 384 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 289
INYQPPTVVPGGDLAKVQRAVCM+SN+T++AE
Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMISNSTSVAE 386
Score = 84.2 bits (199), Expect = 1e-16
Identities = 39/54 (72%), Positives = 43/54 (79%)
Frame = -1
Query: 688 EFQXXWCLXPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 527
EFQ PRIHF L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M KCDP
Sbjct: 254 EFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP 307
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = -3
Query: 782 TXTNXDFXIGQIVSSITAXLRFDGALXXDLT 690
T TN + + Q++SS+TA LRFDGAL D+T
Sbjct: 223 TYTNLNRLVSQVISSLTASLRFDGALNVDVT 253
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 97.9 bits (233), Expect = 8e-21
Identities = 44/130 (33%), Positives = 75/130 (57%)
Frame = -2
Query: 534 ATPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 355
A PRHG+Y+ ++RG + K+V+ I ++ K + FV+W P K + PPT
Sbjct: 304 ADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPT--- 360
Query: 354 GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED 175
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +
Sbjct: 361 -----GIKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 415
Query: 174 LAALEKDYEE 145
+ L +Y++
Sbjct: 416 MNDLVSEYQQ 425
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -1
Query: 661 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 527
PR+HF +V +AP+ S + L+V E+T ++ N M DP
Sbjct: 262 PRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADP 306
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 95.9 bits (228), Expect = 3e-20
Identities = 44/130 (33%), Positives = 74/130 (56%)
Frame = -2
Query: 534 ATPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 355
A PRHG+Y+ ++RG + K+V+ I I+ K + FV+W P K + PP
Sbjct: 304 ADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIPPK--- 360
Query: 354 GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED 175
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +
Sbjct: 361 -----GLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 415
Query: 174 LAALEKDYEE 145
+ L +Y++
Sbjct: 416 MNDLVAEYQQ 425
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -1
Query: 661 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 527
PR+HF +V +AP+ S + L+V E+T ++ N M DP
Sbjct: 262 PRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADP 306
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 95.5 bits (227), Expect = 4e-20
Identities = 43/130 (33%), Positives = 75/130 (57%)
Frame = -2
Query: 534 ATPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 355
A PRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PPT
Sbjct: 303 ADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--- 359
Query: 354 GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED 175
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +
Sbjct: 360 -----GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 414
Query: 174 LAALEKDYEE 145
+ L +Y++
Sbjct: 415 MNDLVSEYQQ 424
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -1
Query: 661 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 527
PR+HF +V +AP+ S + L+V E+T ++ N M DP
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADP 305
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 95.5 bits (227), Expect = 4e-20
Identities = 43/130 (33%), Positives = 75/130 (57%)
Frame = -2
Query: 534 ATPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 355
A PRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PPT
Sbjct: 303 ADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--- 359
Query: 354 GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED 175
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +
Sbjct: 360 -----GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 414
Query: 174 LAALEKDYEE 145
+ L +Y++
Sbjct: 415 MNDLVSEYQQ 424
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -1
Query: 661 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 527
PR+HF +V +AP+ S + L+V E+T ++ N M DP
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADP 305
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 95.5 bits (227), Expect = 4e-20
Identities = 43/130 (33%), Positives = 75/130 (57%)
Frame = -2
Query: 534 ATPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 355
A PRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PPT
Sbjct: 303 ADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--- 359
Query: 354 GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED 175
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +
Sbjct: 360 -----GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 414
Query: 174 LAALEKDYEE 145
+ L +Y++
Sbjct: 415 MNDLVSEYQQ 424
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -1
Query: 661 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 527
PR+HF +V +AP+ S + L+V E+T ++ N M DP
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADP 305
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 95.5 bits (227), Expect = 4e-20
Identities = 43/130 (33%), Positives = 75/130 (57%)
Frame = -2
Query: 534 ATPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 355
A PRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PPT
Sbjct: 303 ADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--- 359
Query: 354 GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED 175
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +
Sbjct: 360 -----GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 414
Query: 174 LAALEKDYEE 145
+ L +Y++
Sbjct: 415 MNDLVSEYQQ 424
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -1
Query: 661 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 527
PR+HF +V +AP+ S + L+V E+T ++ N M DP
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDAKNMMCAADP 305
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 93.1 bits (221), Expect = 2e-19
Identities = 43/130 (33%), Positives = 75/130 (57%)
Frame = -2
Query: 534 ATPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 355
A PRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + + P
Sbjct: 303 ADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSVC----DIAP 358
Query: 354 GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED 175
G ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +
Sbjct: 359 KG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 414
Query: 174 LAALEKDYEE 145
+ L +Y++
Sbjct: 415 MNDLVAEYQQ 424
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -1
Query: 661 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 527
PR+HF +V +AP+ S + LSV E+T ++ N M DP
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADP 305
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/130 (32%), Positives = 74/130 (56%)
Frame = -2
Query: 534 ATPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 355
A PRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + + P
Sbjct: 303 ADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVC----DIAP 358
Query: 354 GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED 175
G + A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +
Sbjct: 359 RG----LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 414
Query: 174 LAALEKDYEE 145
+ L +Y++
Sbjct: 415 MNDLVSEYQQ 424
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -1
Query: 661 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 527
PR+HF +V +AP+ S + L+V E+T ++ N M DP
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADP 305
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 92.7 bits (220), Expect = 3e-19
Identities = 42/130 (32%), Positives = 75/130 (57%)
Frame = -2
Query: 534 ATPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 355
A PRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + + P
Sbjct: 303 ADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVC----DIAP 358
Query: 354 GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED 175
G ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +
Sbjct: 359 TG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 414
Query: 174 LAALEKDYEE 145
+ L +Y++
Sbjct: 415 MNDLVAEYQQ 424
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -1
Query: 661 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 527
PR+HF +V +AP+ S + LSV E+T ++ N M DP
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADP 305
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 53.2 bits (122), Expect = 2e-07
Identities = 38/165 (23%), Positives = 81/165 (49%), Gaps = 4/165 (2%)
Frame = -2
Query: 630 RQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPRHGKYMACCMLYRGDVVPKDVNAAI 451
RQ+++ R+ T+ QT + N KY++ + +G+V P V+ ++
Sbjct: 280 RQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESL 339
Query: 450 ATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD 271
I+ ++ + F+DW P +V ++ + P V ++ + ML++ T+I ++R
Sbjct: 340 QRIRERKLVNFIDWGPASIQVALSKKSPYVQTSHRVSGL-----MLASHTSIRHLFSRCL 394
Query: 270 HKFDLMYAKRAFVHWYVGEGM----EEGEFSEAREDLAALEKDYE 148
++D + K+AF+ Y M + EF E+R+ + +L +Y+
Sbjct: 395 SQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYK 439
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 50.4 bits (115), Expect = 2e-06
Identities = 36/165 (21%), Positives = 81/165 (49%), Gaps = 4/165 (2%)
Frame = -2
Query: 630 RQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPRHGKYMACCMLYRGDVVPKDVNAAI 451
RQ+++ R+ T+ QT + N KY++ + +G+V P V+ ++
Sbjct: 280 RQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESL 339
Query: 450 ATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD 271
I+ ++ + F++W P +V ++ + P V ++ + ML++ T+I +++
Sbjct: 340 QRIRERKLVNFIEWGPASIQVALSKKSPYVQTAHRVSGL-----MLASHTSIRHLFSKCL 394
Query: 270 HKFDLMYAKRAFVHWYVGEGM----EEGEFSEAREDLAALEKDYE 148
++D + K+AF+ Y M + EF E+R+ + +L +Y+
Sbjct: 395 SQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYK 439
>At5g33320.1 68418.m03955 triose phosphate/phosphate translocator,
putative similar to SWISS-PROT:P52178 triose
phosphate/phosphate translocator [Cauliflower] {Brassica
oleracea}
Length = 408
Score = 32.7 bits (71), Expect = 0.32
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 278 ALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTW 171
A ++S + +P+V+S S R WR SS P+R W
Sbjct: 31 AASSSDLNVSPNVVSIPSLSRRSWRLASSDSPLRAW 66
>At1g29200.1 68414.m03573 hypothetical protein contains Pfam
PF03138: Plant protein family. The function of this
family of plant proteins is unknown;
Length = 698
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 373 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 477
LV DT+L TPVD ++ L G VH+ GY
Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394
>At5g58300.1 68418.m07298 leucine-rich repeat transmembrane protein
kinase, putative
Length = 654
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = -2
Query: 720 IRRRSEXGPHXSSRXXGALXPVSTSHWS-RTRQSSLPRRPTMNSFPSPRSQTHASSPP 550
+RR + H + AL +S +S T LP +P S P P H S+PP
Sbjct: 206 LRRLNLSNNHLNGSIPSALGGFPSSSFSGNTLLCGLPLQPCATSSPPPSLTPHISTPP 263
>At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to
SP|P11035 Nitrate reductase 2 (formerly EC 1.6.6.1)
(NR2) {Arabidopsis thaliana}
Length = 917
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 150 RNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRT 266
R +R +PG +G+ R+ PP P R S + H +T +T
Sbjct: 8 RQYARLEPGLNGVVRSYKPPVPGRSDSPKAHQNQTTNQT 46
>At5g15840.1 68418.m01853 zinc finger protein CONSTANS (CO)
identical to Zinc finger protein CONSTANS SP:Q39057 from
[Arabidopsis thaliana]
Length = 373
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = -1
Query: 559 EPANQMV---KCDPPSWQVHGLLYAVPW*RRTQGCERGHRYHQNQAYYPIRRLVSNRFQG 389
+PA+QM+ + P + L Y R+T+ E+ RY +AY IR V+ RF
Sbjct: 290 DPASQMITVTQLSPMDREARVLRYREK--RKTRKFEKTIRYASRKAYAEIRPRVNGRFAK 347
Query: 388 RYQLPATHRG 359
R ++ A +G
Sbjct: 348 R-EIEAEEQG 356
>At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 587
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -2
Query: 489 RGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 346
+G V D A T TK+ + DW P+ FK PP ++P D
Sbjct: 308 QGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355
>At1g68080.1 68414.m07777 expressed protein
Length = 383
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 415 DELDSTLGFDGSDGRVHILGYDVTTVQ 495
D + +GFD R+H+LG+DV ++Q
Sbjct: 211 DGSNQNIGFDVCVARLHLLGFDVHSLQ 237
>At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase
(MAPKK), putative (MKK4) identical to MAP kinase kinase
4 [Arabidopsis thaliana] gi|3219271|dbj|BAA28830
gi_13265419
Length = 366
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +3
Query: 63 ASAP*KIFHWLSTLRLPHPRLQRSPCRLLRNPS--RGQPG----PHGLRRTLPPPYPHRR 224
A+A + H++S P +RS +LL++P R P P L + LPPP P
Sbjct: 301 ATASPEFRHFISCCLQREPGKRRSAMQLLQHPFILRASPSQNRSPQNLHQLLPPPRPLSS 360
Query: 225 TSA 233
+S+
Sbjct: 361 SSS 363
>At4g13930.1 68417.m02156 glycine hydroxymethyltransferase, putative
/ serine hydroxymethyltransferase, putative /
serine/threonine aldolase, putative similar to serine
hydroxymethyltransferase [Chlamydomonas reinhardtii]
GI:17066746; contains Pfam profile PF00464: serine
hydroxymethyltransferase
Length = 471
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -1
Query: 634 YAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPPSWQVH 509
Y+ I + Y + EI N C A + CDP +W V+
Sbjct: 59 YSEGIPGNRYYGGNEFIDEIENLCRSRALEAFHCDPAAWGVN 100
>At3g26855.1 68416.m03360 hypothetical protein
Length = 163
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 257 SCTPSVLSCTGTSVRVWRRESSPK 186
SC P +LS + VR W +SSPK
Sbjct: 114 SCNPMLLSTFPSIVRAWDGKSSPK 137
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,654,678
Number of Sequences: 28952
Number of extensions: 364151
Number of successful extensions: 1403
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1394
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2019160800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -