Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_O08
(843 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 31 0.058
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 28 0.41
CR954257-13|CAJ14164.1| 420|Anopheles gambiae predicted protein... 26 1.2
AY428512-1|AAR89530.1| 420|Anopheles gambiae EKN1 protein. 26 1.2
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 25 2.2
AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. 25 2.2
AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical prote... 25 2.2
AJ438610-3|CAD27475.1| 190|Anopheles gambiae putative RHO small... 23 8.8
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 30.7 bits (66), Expect = 0.058
Identities = 29/120 (24%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Frame = -2
Query: 497 HQEKKVDYFERAKRLEEIPLLQKSLEEKQVQDKAFWEQQEKERIEQLIEARALDVATSER 318
+Q+ K+ + ++ +E+ +++E++V+ +E+ + IEQL++ + VA ER
Sbjct: 666 YQQTKMKVKRQEQKCKELTARLVNVDEEKVK----FERSCRTIIEQLLDQQRRKVAALER 721
Query: 317 MSRMAVHRDEFMARLR------SERGAAYAQKVAAFN--EKLQAEKEKRLAERRAQRIEK 162
+ + D R+R ++R A + A+ +K A EK+LAE +A+ +K
Sbjct: 722 YAAASREHDLLEQRIRLFEERNNDREANFRLLEDAYQSAKKTLANVEKKLAEVKAKSSDK 781
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 27.9 bits (59), Expect = 0.41
Identities = 20/75 (26%), Positives = 34/75 (45%)
Frame = -2
Query: 494 QEKKVDYFERAKRLEEIPLLQKSLEEKQVQDKAFWEQQEKERIEQLIEARALDVATSERM 315
+E + ER K E ++ EK+ ++K E++E+ER ++ E R + ER
Sbjct: 459 REAREAAIEREKERELREQREREQREKEQREKEQREKEERERQQREKEQREREQREKERE 518
Query: 314 SRMAVHRDEFMARLR 270
A R+ R R
Sbjct: 519 REAARERERERERER 533
>CR954257-13|CAJ14164.1| 420|Anopheles gambiae predicted protein
protein.
Length = 420
Score = 26.2 bits (55), Expect = 1.2
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = -2
Query: 401 KAFWEQQEKERIEQLIEARALDVATSERMSRMAVHRDEFMARLRSERGA 255
K +E+Q ++R+EQ + RA++ +R + +HR + R R++R A
Sbjct: 111 KQQYEEQHRKRLEQQSKQRAIE---KDRKKKDEIHRQ--IERERADRSA 154
>AY428512-1|AAR89530.1| 420|Anopheles gambiae EKN1 protein.
Length = 420
Score = 26.2 bits (55), Expect = 1.2
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = -2
Query: 401 KAFWEQQEKERIEQLIEARALDVATSERMSRMAVHRDEFMARLRSERGA 255
K +E+Q ++R+EQ + RA++ +R + +HR + R R++R A
Sbjct: 111 KQQYEEQHRKRLEQQSKQRAIE---KDRKKKDEIHRQ--IERERADRSA 154
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 25.4 bits (53), Expect = 2.2
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = -2
Query: 443 PLLQKSLEEKQVQDKAFWEQ--QEKERIEQLIEARALDVATSERMSRMAVHRDEFMARLR 270
P+ +L+ ++D W + + +RI ++ RA D + + +DE A L
Sbjct: 1039 PVCPDTLQRHLLRDADSWSRICEGAKRITAQLQ-RAWDEERAALAVNVIERQDEDAAELE 1097
Query: 269 SERGAAYAQKVAAFNEKLQAEKEKRLAERRAQR 171
++R A+ A NE+ A + A RR +R
Sbjct: 1098 AQR----AEVRRARNERRNANRRAATARRREER 1126
>AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein.
Length = 615
Score = 25.4 bits (53), Expect = 2.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1
Query: 555 QREAEELMKERRELQARLKS 496
QREAEE + RRE + RL++
Sbjct: 423 QREAEEAVLTRREYEERLRN 442
Score = 23.8 bits (49), Expect = 6.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 383 QEKERIEQLIEARALDVATSERMSRMAVHRDE 288
+EK+RI + E + R +RM H DE
Sbjct: 386 EEKDRIASIKEREQTEQQRQLRAARMQAHLDE 417
>AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical protein
protein.
Length = 166
Score = 25.4 bits (53), Expect = 2.2
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = -2
Query: 491 EKKVDYFERAKRLEEIPLLQKSLEEKQVQDKAFWEQQEKERIEQLIEARALDVATSERMS 312
E + + E + LEE L+ + LEE+ QQE + +++ + R VA +R
Sbjct: 97 ESESEESEESDELEEARLVAEELEER---------QQELDYLKRYLVGRLQAVAILDRRV 147
Query: 311 RMAVHRDEFMAR 276
R AV R ++ R
Sbjct: 148 RPAVIRRPWIRR 159
>AJ438610-3|CAD27475.1| 190|Anopheles gambiae putative RHO small
GTPase protein.
Length = 190
Score = 23.4 bits (48), Expect = 8.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 491 EKKVDYFERAKRLEEIPLLQKSLEEKQVQDKAFWEQQEKERI 366
+K + K +E L Q+ L KQV D+A +EKER+
Sbjct: 146 QKLANKIRAVKYMECSALTQRGL--KQVFDEALCATEEKERM 185
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,384
Number of Sequences: 2352
Number of extensions: 8883
Number of successful extensions: 29
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89305416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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