Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_O08
(843 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g11420.1 68417.m01840 eukaryotic translation initiation facto... 61 8e-10
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 40 0.003
At1g13120.1 68414.m01521 expressed protein contains Prosite PS00... 39 0.004
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 34 0.10
At1g10890.1 68414.m01251 F-box family protein contains Pfam PF00... 34 0.10
At1g18265.1 68414.m02278 expressed protein 34 0.14
At3g11450.1 68416.m01396 DNAJ heat shock N-terminal domain-conta... 33 0.18
At3g23930.1 68416.m03006 expressed protein 33 0.31
At5g44180.1 68418.m05406 homeobox transcription factor, putative... 32 0.41
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 32 0.41
At5g55820.1 68418.m06956 expressed protein 31 0.72
At5g27220.1 68418.m03247 protein transport protein-related low s... 31 0.72
At5g65770.1 68418.m08276 nuclear matrix constituent protein-rela... 31 1.3
At3g56990.1 68416.m06344 glycine-rich protein conserved hypothet... 30 1.7
At5g04890.1 68418.m00513 small heat shock-like protein (RTM2) si... 30 2.2
At4g36980.1 68417.m05240 expressed protein 30 2.2
At5g05210.1 68418.m00555 nucleolar matrix protein-related contai... 29 2.9
At5g64180.1 68418.m08058 expressed protein 29 3.9
At1g30320.1 68414.m03708 remorin family protein contains Pfam do... 29 3.9
At5g63320.1 68418.m07946 expressed protein 29 5.1
At5g47660.1 68418.m05884 DNA-binding protein-related similar to ... 29 5.1
At4g12780.1 68417.m02005 auxilin-related low similarity to SP|Q2... 29 5.1
At1g58025.1 68414.m06576 DNA-binding bromodomain-containing prot... 29 5.1
At5g28300.1 68418.m03436 trihelix DNA-binding protein, putative ... 28 6.8
At4g27595.1 68417.m03964 protein transport protein-related low s... 28 6.8
At2g16270.1 68415.m01863 expressed protein and genefinder; expr... 28 6.8
At5g18230.1 68418.m02139 transcription regulator NOT2/NOT3/NOT5 ... 28 8.9
At1g03290.1 68414.m00307 expressed protein ESTs gb|H36966, gb|R6... 28 8.9
>At4g11420.1 68417.m01840 eukaryotic translation initiation factor 3
subunit 10 / eIF-3 theta / eIF3a (TIF3A1) identical to
eukaryotic translation initiation factor 3 subunit 10
(eIF-3 theta) (Eukaryotic translation initiation factor 3
large subunit) (eIF3a) (p114). [Arabidopsis thaliana]
SWISS-PROT:Q9LD55
Length = 987
Score = 61.3 bits (142), Expect = 8e-10
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 6/176 (3%)
Frame = -2
Query: 665 LKERMAHIXQPAXRTKDGSENSMREDPK--KNGC*SYLLSGKLKN**RNVASFRLD*SHQ 492
L+E A + + R K G + + + K K L+ +LK R +L
Sbjct: 629 LEEAQALLEETEKRMKKGKKKPLLDGEKVTKQSVKERALTEQLKE--RQEMEKKLQ--KL 684
Query: 491 EKKVDYFERAKRLEEIPLLQKSLEEKQVQDKAFWEQQEKERIEQLIEARALDVATSERMS 312
K +DY ERAKR E PL++ + + + V+++ F+E++++ +E E D+ R+S
Sbjct: 685 AKTMDYLERAKREEAAPLIEAAYQRRLVEEREFYEREQQREVELSKERHESDLKEKNRLS 744
Query: 311 RMAVHRDEFMARLRSERGAAYAQKVAAFNEKLQAEKEKRLA----ERRAQRIEKRR 156
RM +++ F A++ S R A + ++++ E+E+R++ E++ +R KR+
Sbjct: 745 RMLGNKEIFQAQVISRRQAEF--------DRIRTEREERISKIIREKKQERDIKRK 792
Score = 28.3 bits (60), Expect = 6.8
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Frame = -2
Query: 494 QEKKVDYFERAKRLEEIPLLQKSLEEKQVQDKAFWEQQEKERIEQLIEARALDVATS--- 324
QE++ ER + + + L + + E +Q + A ++ K+RI + IE + L+ A +
Sbjct: 578 QERQQLEMEREEEQKRLKLQKLTEEAEQKRLAAELAERRKQRILREIEEKELEEAQALLE 637
Query: 323 ERMSRMAVHRDEFMARLRSERGAAYAQKVAAFNEKLQAEKEKRLAERRAQRIEK 162
E RM + + + L E+ + K A E+L KE++ E++ Q++ K
Sbjct: 638 ETEKRMKKGKKKPL--LDGEKVTKQSVKERALTEQL---KERQEMEKKLQKLAK 686
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Frame = -2
Query: 470 ERAKRLEEIPLLQKSLEEKQVQDKAFWEQQEKERI--EQLIEARALDVATSERMSRMAVH 297
E A++ EE ++ + +++ Q++ E++E ER E+ R ++A R
Sbjct: 560 EEARKREEERKREEEMAKRREQERQRKEREEVERKIREEQERKREEEMAKRREQERQKKE 619
Query: 296 RDEFMARLRSERGAAYAQKVAAFNEKLQAEKEKRLAERRAQRIEKRRHE 150
R+E + R E +++A E+ + KE+ ER+ + E R E
Sbjct: 620 REEMERKKREEEARKREEEMAKIREEERQRKEREDVERKRREEEAMRRE 668
Score = 37.9 bits (84), Expect = 0.008
Identities = 30/120 (25%), Positives = 58/120 (48%), Gaps = 5/120 (4%)
Frame = -2
Query: 494 QEKKVDYFERAKRLEEIPLLQKSLEEKQVQDKAFWEQQEKERIEQLIEA-----RALDVA 330
+E++ E AK+ EE ++ E ++V+ K EQ+ K R E+ + R ++A
Sbjct: 520 EEEREKEEEMAKKREEE---RQRKEREEVERKRREEQERKRREEEARKREEERKREEEMA 576
Query: 329 TSERMSRMAVHRDEFMARLRSERGAAYAQKVAAFNEKLQAEKEKRLAERRAQRIEKRRHE 150
R R+E ++R E+ +++A E+ + +KE+ ER+ + E R+ E
Sbjct: 577 KRREQERQRKEREEVERKIREEQERKREEEMAKRREQERQKKEREEMERKKREEEARKRE 636
Score = 34.3 bits (75), Expect = 0.10
Identities = 32/121 (26%), Positives = 60/121 (49%)
Frame = -2
Query: 512 RLD*SHQEKKVDYFERAKRLEEIPLLQKSLEEKQVQDKAFWEQQEKERIEQLIEARALDV 333
R + Q K+ + ER R E+ ++ + +++ Q++ E++E ER ++ EAR
Sbjct: 578 RREQERQRKEREEVERKIREEQERKREEEMAKRREQERQKKEREEMERKKREEEAR---- 633
Query: 332 ATSERMSRMAVHRDEFMARLRSERGAAYAQKVAAFNEKLQAEKEKRLAERRAQRIEKRRH 153
+R MA R+E R R ER ++ E ++ E+E++ E A+R E+ R
Sbjct: 634 ---KREEEMAKIREE--ERQRKER--EDVERKRREEEAMRREEERKREEEAAKRAEEERR 686
Query: 152 E 150
+
Sbjct: 687 K 687
Score = 33.5 bits (73), Expect = 0.18
Identities = 31/115 (26%), Positives = 53/115 (46%)
Frame = -2
Query: 494 QEKKVDYFERAKRLEEIPLLQKSLEEKQVQDKAFWEQQEKERIEQLIEARALDVATSERM 315
+E K ER KR EE +K EE++ + E+ K+R E+ +V R
Sbjct: 497 EEAKRREEERKKREEEAEQARKREEEREKE-----EEMAKKREEERQRKEREEVERKRRE 551
Query: 314 SRMAVHRDEFMARLRSERGAAYAQKVAAFNEKLQAEKEKRLAERRAQRIEKRRHE 150
+ R+E AR R E +++A E+ + KE+ ER+ + ++R+ E
Sbjct: 552 EQERKRREE-EARKREEE-RKREEEMAKRREQERQRKEREEVERKIREEQERKRE 604
Score = 31.5 bits (68), Expect = 0.72
Identities = 27/115 (23%), Positives = 53/115 (46%)
Frame = -2
Query: 494 QEKKVDYFERAKRLEEIPLLQKSLEEKQVQDKAFWEQQEKERIEQLIEARALDVATSERM 315
+E++ E AKR EE +K EE+ Q + ++E+E+ E++ + R + ER
Sbjct: 489 EEERKREEEEAKRREEE---RKKREEEAEQARK--REEEREKEEEMAKKREEERQRKERE 543
Query: 314 SRMAVHRDEFMARLRSERGAAYAQKVAAFNEKLQAEKEKRLAERRAQRIEKRRHE 150
R+E R R E A ++ E++ +E+ + + +E++ E
Sbjct: 544 EVERKRREE-QERKRREEEARKREEERKREEEMAKRREQERQRKEREEVERKIRE 597
Score = 31.1 bits (67), Expect = 0.96
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Frame = -2
Query: 494 QEKKVDYFERAKRLEEIPLLQKSLEEKQVQDKAFWEQQEKERIEQLIEARALDVATSERM 315
+E++ E AKR EE K EE++ + K E++ ++R E+ R + A
Sbjct: 449 EEEEARKREEAKRREEEEA--KRREEEETERKKREEEEARKREEE--RKREEEEAKRREE 504
Query: 314 SRMAVHRDEFMARLRSERGAAYAQKVAAFNEKLQAEKEKRLAER-RAQRIEKRRHE 150
R + AR R E +++A E+ + KE+ ER R + E++R E
Sbjct: 505 ERKKREEEAEQARKREEEREK-EEEMAKKREEERQRKEREEVERKRREEQERKRRE 559
>At1g13120.1 68414.m01521 expressed protein contains Prosite
PS00012: Phosphopantetheine attachment site; similar to
GLE1 (GI:3288817) {Homo sapiens}; EST gb|N37870 comes
from this gene
Length = 611
Score = 39.1 bits (87), Expect = 0.004
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Frame = -2
Query: 476 YFERAKRLEEIPLLQKSLEEKQVQDKAFWEQQEKERIEQLIEARAL--DVATSERMSRMA 303
Y E K +E LQ + + D Q + +I+ IE R + + A E +
Sbjct: 176 YSETRKEVERKLDLQYQRKVAEALDTHLTAVQREHKIKSQIEERKIRSEEAQEEARRKER 235
Query: 302 VHRDEFMARLRSERGAAYAQKVAAFNEKLQAEKEKRLAERRAQR 171
H++E ++R E+ A AQ +A K++AE+EK+ ER+A R
Sbjct: 236 AHQEE---KIRQEKARAEAQMLA----KIRAEEEKKEVERKAAR 272
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 34.3 bits (75), Expect = 0.10
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = -2
Query: 431 KSLEEKQVQDKAFWEQQEKERIEQLIEARALDVATSERMSRMAVHRDEFMARLRSERGAA 252
K EK+ ++ E +EK +EQ ++A L+ ER + R+E R++
Sbjct: 741 KEAREKEENERRIKEAREKAELEQRLKA-TLEQEEKERQIKERQEREE--NERRAKEVLE 797
Query: 251 YAQKVAAFNEKL-QAEKEKRLAERRAQRIEKRR 156
A+ E L Q E E+RL E R + K++
Sbjct: 798 QAENERKLKEALEQKENERRLKETREKEENKKK 830
>At1g10890.1 68414.m01251 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640 :
F-box protein interaction domain
Length = 592
Score = 34.3 bits (75), Expect = 0.10
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Frame = -2
Query: 470 ERAKRLEEIPLLQKSLEEK----QVQDKAFWEQQEKERIEQLIEARALDVATSERMSRMA 303
E KRL E Q E++ + ++K EQQEKE E++ E V ++R M
Sbjct: 117 EGRKRLNEEVAAQLEEEKEASLIEAKEKEEREQQEKEERERIAEENLKRVEEAQRKEAME 176
Query: 302 VHRDEFMARLRSERGAAYAQKVAAFNEKLQAEKEKRLAERRAQRIEKRR 156
R E R R E QK A K E+E+RL + + K R
Sbjct: 177 RQRKE-EERYR-ELEELQRQKEEAMRRKKAEEEEERLKQMKLLGKNKSR 223
>At1g18265.1 68414.m02278 expressed protein
Length = 280
Score = 33.9 bits (74), Expect = 0.14
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = -2
Query: 458 RLEEIPLLQKSLEEKQVQDKAFWEQQEKERIEQLIEARALDVATSERMSRMAVHRDEFMA 279
R + L + L+EK + + E+E Q E + LDV T M + R ++M
Sbjct: 149 RENTVALSETELDEKNHHGEEEESEDEEESQSQNDEDQLLDVITLRTMVKRERKRGDYMK 208
Query: 278 R-LRSERGAAYAQKVAAFNEKLQAEKEKRLAERRAQRIEK 162
+ L ER AA + A L+ EK + E ++ ++
Sbjct: 209 KELEKERRAAESAAEEAMAMLLKLRMEKSVVEMETKQYKR 248
>At3g11450.1 68416.m01396 DNAJ heat shock N-terminal
domain-containing protein / cell division
protein-related similar to GlsA [Volvox carteri f.
nagariensis] GI:4633129; contains Pfam profiles PF00226
DnaJ domain, PF00249 Myb-like DNA-binding domain
Length = 663
Score = 33.5 bits (73), Expect = 0.18
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Frame = -2
Query: 491 EKKVDYFERAKRLEEIPLLQK-SLEEKQVQDKAFWEQQEKERIEQLIEARALDVATSERM 315
+K +++ K E P ++ LE+ +++ W EKE ++ ++AR + A +
Sbjct: 246 DKFYNFWYAFKSWREFPDEEEHDLEQADSREERRW--MEKENAKKTVKARKEEHARIRTL 303
Query: 314 SRMAVHRDEFMARLRSERGAAYAQKVAAFNEKLQAEKEKRLAERRAQRIEKRRHE 150
A +D + + + E A QK A K+QA+K++ A EKRR E
Sbjct: 304 VDNAYRKDPRIVKRKEEEKAEKQQKKDA---KIQAKKKQEEDAAIAAEEEKRRKE 355
>At3g23930.1 68416.m03006 expressed protein
Length = 224
Score = 32.7 bits (71), Expect = 0.31
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Frame = -2
Query: 470 ERAKRLEEIPLLQKSLEEKQVQDKAFWEQQE--KERIEQLIEARALDVATSERMSRMAVH 297
ER K EE+ L+K LEE++ E++E K +E++ RA+ E+ ++ +
Sbjct: 55 ERKKLREEVRRLRKKLEEREEAKTTTTEEREYWKWVVEEMCVERAVRDEAVEKWKQLYLA 114
Query: 296 RDEFMARLRSERGAAYAQKVAAFNEKLQAEKEKRLAERRAQRIEKRRHE 150
+ L S ++ + A KL+ ++E+ E A+R+E R E
Sbjct: 115 IKNELDHLISHTTSSSGE--AIMQRKLEEQEEE---ETEAKRVEVLRDE 158
>At5g44180.1 68418.m05406 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7/homeotic
protein Hox7 (GI:19486) {Lycopersicon peruvianum};
similar to GP|4165087| Williams-Beuren syndrome deletion
transcript 9 [Homo sapiens]; contains Pfam PF02791: DDT
domain and Pfam PF00046: Homeobox domain
Length = 1694
Score = 32.3 bits (70), Expect = 0.41
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Frame = -2
Query: 488 KKVDYFERAKRLEEIPLL-QKSLEEKQVQDKAFWEQQEKERIEQLIEARALDVATSERMS 312
K+++ +R +R EE LL +K EE++ + E Q +E+ + RA + E M
Sbjct: 366 KEMERQDRERRKEEERLLREKQREEERYLKEQMRELQRREKFLKKETIRAEKMRQKEEM- 424
Query: 311 RMAVHRDEFMARLRSERGAAYAQKVAAFNEKLQAEKEKRL 192
+++ +ARL++ A A+K+A E ++ +++RL
Sbjct: 425 ----RKEKEVARLKAANERAIARKIA--KESMELIEDERL 458
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240: Ubiquitin
family
Length = 1919
Score = 32.3 bits (70), Expect = 0.41
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Frame = -2
Query: 500 SHQEKKVDYFERAKRLEEIPLLQKSLEEKQVQDKAFWEQQE-KERIEQLIEARA--LDVA 330
S + K++ +R + L + SLE + +D+ +WE++E + + AR D++
Sbjct: 1648 SRKTKRMAELAGFQRQQSFRLSENSLERRPKEDRVWWEEEEISTGRHREVRARRDYDDMS 1707
Query: 329 TSERMSRMAVHRDEFMARLRSERGAAYAQKVAAFNEKLQAEKE 201
SE + +A R + +RSER QK +K + + E
Sbjct: 1708 VSEEPNEIAEIR-RYEEVIRSEREEEERQKAKKKKKKKKLQPE 1749
>At5g55820.1 68418.m06956 expressed protein
Length = 1826
Score = 31.5 bits (68), Expect = 0.72
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Frame = -2
Query: 452 EEIPLLQKSLEEKQVQDKAFWEQQ-EKERIEQLIEARALDVATSERMSRMAVHRDEFMAR 276
+EI +K + K+ + + W+Q+ EK++ E+ + + ++A +R R
Sbjct: 1561 QEIEKKKKEEDRKKKEAEMAWKQEMEKKKKEEERKRKEFEMADRKRQREEEDKR--LKEA 1618
Query: 275 LRSERGAAYAQKVAAFNEKLQAEKE-KRLAERRAQRIEKRRHE 150
+ +R A + ++ +EKLQAEKE KR A + +K E
Sbjct: 1619 KKRQRIADFQRQQREADEKLQAEKELKRQAMDARIKAQKELKE 1661
>At5g27220.1 68418.m03247 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1181
Score = 31.5 bits (68), Expect = 0.72
Identities = 17/71 (23%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = -2
Query: 470 ERAKRLEEIPLLQKSLEEKQVQDKAFWEQQEKERIEQLIEARALDV-ATSERMSRMAVHR 294
E ++ EE+ L+KSLEE V++++ ++ + I +L+ +D+ E + +M H
Sbjct: 103 EVEEKREELGCLRKSLEECSVEERS--KRGQLSEIVELLRKSQVDLDLKGEELRQMVTHL 160
Query: 293 DEFMARLRSER 261
+ + ++ E+
Sbjct: 161 ERYRVEVKEEK 171
>At5g65770.1 68418.m08276 nuclear matrix constituent protein-related
low similarity to nuclear matrix constituent protein 1
(NMCP1) [Daucus carota] GI:2190187
Length = 1042
Score = 30.7 bits (66), Expect = 1.3
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 4/118 (3%)
Frame = -2
Query: 491 EKKVDYFERAKRLEEIPLLQKSL--EEKQVQDKAFWEQQEKERIEQLIEARALDVATSER 318
EK+ D E++ L+E +K+L E+ + K + EKER+ +L + + E
Sbjct: 445 EKEKDITEKSFNLDE---KEKNLVATEEDINRKTTMLEDEKERLRKLDLELQQSLTSLED 501
Query: 317 MSRMAVHRDEFMARLRSERG--AAYAQKVAAFNEKLQAEKEKRLAERRAQRIEKRRHE 150
+ + + L+SE + K+ + L+A+K + LAE ++EK + E
Sbjct: 502 KRKRVDSATQKLEALKSETSELSTLEMKLKEELDDLRAQKLEMLAEADRLKVEKAKFE 559
>At3g56990.1 68416.m06344 glycine-rich protein conserved
hypothetical protein SPCC330.09 - Schizosaccharomyces
pombe, PIR:T41319
Length = 711
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = -2
Query: 233 AFNEKLQAEKEKRLAERRAQRIEKRR 156
AF++ L+ K+++L E+R QRI K+R
Sbjct: 427 AFDDYLERRKQEKLEEQRTQRITKKR 452
>At5g04890.1 68418.m00513 small heat shock-like protein (RTM2)
similar to 17.9 kDa heat-shock protein [Helianthus
annuus] GI:11990130; contains Pfam profile PF00011:
Hsp20/alpha crystallin family; supporting cDNA
gi|7407072|gb|AF208051.1|AF208051; identical to cDNA
small heat shock-like protein (RTM2) GI:7407072, small
heat shock-like protein [Arabidopsis thaliana]
GI:7407073
Length = 366
Score = 29.9 bits (64), Expect = 2.2
Identities = 28/121 (23%), Positives = 59/121 (48%), Gaps = 10/121 (8%)
Frame = -2
Query: 491 EKKVDYFERAKRLEEIPLLQKSLEEKQVQDKAFWEQ------QEKERIEQLIEARAL--D 336
+K + E ++LEE L ++ LEE++++D E+ QE++ +++ E +
Sbjct: 194 KKLQEEIEAKEKLEERKLEERRLEERKLEDMKLAEEAKLKKIQERKSVDESGEKEKILKP 253
Query: 335 VATSERMSRMAVHRDEFMARLRSERGAAYAQKVAAFNEKL--QAEKEKRLAERRAQRIEK 162
+ +A + E + L+S G + V + EKL EKEK++ + ++I +
Sbjct: 254 EVVYTKSGHVATPKPESGSGLKSGFGGV-GEVVKSAEEKLGNLVEKEKKMGKGIMEKIRR 312
Query: 161 R 159
+
Sbjct: 313 K 313
>At4g36980.1 68417.m05240 expressed protein
Length = 560
Score = 29.9 bits (64), Expect = 2.2
Identities = 28/114 (24%), Positives = 48/114 (42%)
Frame = -2
Query: 500 SHQEKKVDYFERAKRLEEIPLLQKSLEEKQVQDKAFWEQQEKERIEQLIEARALDVATSE 321
S EKK ER KR+ L K +++ + A +QE++R+E+L E L +
Sbjct: 425 SQAEKKETPQERLKRIMN-KQLTKQIKKDSATETAKKREQERQRLEKLAETSRLS-RNRQ 482
Query: 320 RMSRMAVHRDEFMARLRSERGAAYAQKVAAFNEKLQAEKEKRLAERRAQRIEKR 159
R ++ R R R R + ++ + + + + R R R KR
Sbjct: 483 RSRSRSISRSPPPRRHRRSRSRSGSR--SRRSRRHSSRSRSRSPSRSLSRSPKR 534
>At5g05210.1 68418.m00555 nucleolar matrix protein-related contains
Pfam domain, PF04935: Surfeit locus protein 6
Length = 386
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/113 (20%), Positives = 52/113 (46%)
Frame = -2
Query: 494 QEKKVDYFERAKRLEEIPLLQKSLEEKQVQDKAFWEQQEKERIEQLIEARALDVATSERM 315
+EKK +A+ LE L+ + ++ + D + K + A + V ++
Sbjct: 252 KEKKKRRLSKARELERAMKLEAAKKDPEKGDVIAKKHSWKAATSR---AAGIKVHDDPKL 308
Query: 314 SRMAVHRDEFMARLRSERGAAYAQKVAAFNEKLQAEKEKRLAERRAQRIEKRR 156
+ ++H+D + R E+ A ++ +K + EK+++ + A RIE+ +
Sbjct: 309 LKQSIHKD----KKRQEKNAEKWKERIEGQQKFKVEKQQKRSGNIADRIEQNK 357
>At5g64180.1 68418.m08058 expressed protein
Length = 158
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = -2
Query: 368 IEQLIEARALDVATSERMSRMAVHRDEFMARLRSERGAAYAQKVAAFNEKLQAEKEKRLA 189
+E+ +RA V+ R ++ R + + R E AA A +EK QAE ++ A
Sbjct: 40 VEEDTFSRASLVSEQARTIKVLEQRVQTLER---ELDAAITAAAHARSEKRQAESSQKAA 96
Query: 188 ERRAQRIEK 162
E RAQ + K
Sbjct: 97 ESRAQDVTK 105
>At1g30320.1 68414.m03708 remorin family protein contains Pfam
domain, PF03763: Remorin, C-terminal region
Length = 509
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = -2
Query: 500 SHQEKKVDYFERAKRLEEIPLLQKSLEEKQVQDKA-FWEQQEKERIEQLIEARALDVATS 324
+ + +K+++ +RA EE + + K+ + + WE QEK ++E + V
Sbjct: 387 AEEAQKIEFEKRATAWEEAEKSKHNARYKREEIRIQAWESQEKAKLEAEMRRIEAKVEQM 446
Query: 323 ERMSRMAVHRDEFMARLRSERGAAYAQ 243
+ + + + +A+ RSE A A+
Sbjct: 447 KAEAEAKIMKKIALAKQRSEEKRALAE 473
>At5g63320.1 68418.m07946 expressed protein
Length = 569
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -2
Query: 311 RMAVHRDEFMARLRSERGAAYAQKVAAFNEKLQAEKEKRLAERRAQRIEK 162
++ + R+EF RLR E+ A+ AA + +A+ E RR + E+
Sbjct: 98 KLRIEREEFEKRLREEKERLQAEAKAAEEARRKAKAEAAEKARREREQER 147
>At5g47660.1 68418.m05884 DNA-binding protein-related similar to
GTL1 [Arabidopsis thaliana] GI:2664198
Length = 398
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = -2
Query: 437 LQKSLEEKQVQDKAFWEQQEKERIEQLIEARALDVA 330
+ + +E ++++ + W QQE ER+ Q EAR ++A
Sbjct: 203 VMEKMEVERIRREEAWRQQETERMTQNEEARKQEMA 238
>At4g12780.1 68417.m02005 auxilin-related low similarity to
SP|Q27974 Auxilin {Bos taurus}
Length = 485
Score = 28.7 bits (61), Expect = 5.1
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
Frame = -2
Query: 416 KQVQDKA---FWEQQEKERIEQLIEARALDVATSERMSRMAVHRDEFMARLRSERGAAYA 246
K DKA F +E+ E L +R+ + +E E RL ER A
Sbjct: 42 KDAMDKAEAKFRHAKERREKENLKASRSREGDHTENYDSRERELREKQVRLDRER----A 97
Query: 245 QKVAAFNEKLQAEKEKRLAERRAQRIEKRRHEWI 144
++ A + + EKE+R ER +RIE+ R +
Sbjct: 98 EREAEMEKAQEREKEER--EREQKRIERERERLV 129
>At1g58025.1 68414.m06576 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487; contains
prenyl group binding site (CAAX box) Prosite:PS00294
Length = 769
Score = 28.7 bits (61), Expect = 5.1
Identities = 27/121 (22%), Positives = 54/121 (44%)
Frame = -2
Query: 509 LD*SHQEKKVDYFERAKRLEEIPLLQKSLEEKQVQDKAFWEQQEKERIEQLIEARALDVA 330
+D +++K + E + + + ++ +E + ++ E + K + + +++D +
Sbjct: 400 VDKKPEQEKTEIVELDSPVSKTQRVIENKQEVEEEENVEVESENKTKANVEDKTQSIDRS 459
Query: 329 TSERMSRMAVHRDEFMARLRSERGAAYAQKVAAFNEKLQAEKEKRLAERRAQRIEKRRHE 150
E E + L S G Q NE + EKEKRL E++ +R+E R E
Sbjct: 460 MEETGDEPVNSAAEKLVVLASLEGPKSTQ-----NE--EEEKEKRLQEQK-KRLELERKE 511
Query: 149 W 147
W
Sbjct: 512 W 512
>At5g28300.1 68418.m03436 trihelix DNA-binding protein, putative
similar to GT-2 factor [Arabidopsis thaliana GI:416490
Length = 619
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = -2
Query: 431 KSLEEKQVQDKAFWEQQEKERIEQLIEARALDVA 330
K EEK +++A W++QE ER+ + +E RA + A
Sbjct: 327 KKEEEKIAREEA-WKKQEIERVNKEVEIRAQEQA 359
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = -2
Query: 497 HQEKKVDYFERAKRLEEIPLLQKSLEEKQVQ 405
+QE KV AKR+EE+ +++SL +K++Q
Sbjct: 1005 NQELKVREASAAKRIEELSKMKESLLDKELQ 1035
>At2g16270.1 68415.m01863 expressed protein and genefinder;
expression supported by MPSS
Length = 759
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = -2
Query: 473 FERAKRLEEIPLLQKSLEEKQVQDKAFWEQQEKERIEQLIEARALDVATSERMS 312
F+ K+LEE+ + + S ++ ++ + EQ++ E ++E DV SE S
Sbjct: 232 FDECKQLEELFISESSSDDTELSVEESEEQEKDGAEEVVVEEETEDVEQSEAES 285
>At5g18230.1 68418.m02139 transcription regulator NOT2/NOT3/NOT5
family protein contains Pfam domain PF04153: NOT2 / NOT3
/ NOT5 family
Length = 843
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 380 PVAPRMPCLEPVSLPGSSAEVVFLPIAW 463
P +PR P + P + P + A ++ P+ W
Sbjct: 712 PYSPRNPAITPQTFPQTQAPIINNPLLW 739
>At1g03290.1 68414.m00307 expressed protein ESTs gb|H36966,
gb|R65511, gb|T42324 and gb|T20569 come from this gene
Length = 571
Score = 27.9 bits (59), Expect = 8.9
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = -2
Query: 455 LEEIPLLQKSLEE-KQVQDKAFWEQQEKERIEQLIEARALDVATSERMSRMAVHRDEFMA 279
L+++ L+K LE K+ D E ++ I E + L+ R+ ++ R++ +A
Sbjct: 338 LQKVEELKKMLEHAKEANDMHAGEVYGEKSI-LATEVKELE----NRLLNLSEERNKSLA 392
Query: 278 RLRSERGAAYAQKVAAFNEKLQAEKEKRLAERRA 177
L RG+ + AA K AEKEK+ E A
Sbjct: 393 ILDEMRGSLEIRLAAALELKKTAEKEKKDKEDSA 426
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,315,942
Number of Sequences: 28952
Number of extensions: 201113
Number of successful extensions: 766
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1950880000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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