Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_O06
(843 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 192 1e-47
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 167 2e-40
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 143 6e-33
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 124 2e-27
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 109 9e-23
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 105 1e-21
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 105 1e-21
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 99 2e-19
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 95 1e-18
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 90 7e-17
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 89 2e-16
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 83 6e-15
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 83 6e-15
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 82 2e-14
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 77 6e-13
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 71 3e-11
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 69 1e-10
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 66 8e-10
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 60 7e-08
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 48 4e-04
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 45 0.002
UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal ... 44 0.005
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 44 0.006
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 43 0.011
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 39 0.18
UniRef50_Q6M9P8 Cluster: Putative cytochrome-c oxidase fixO chai... 38 0.32
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 38 0.32
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 36 1.7
UniRef50_Q54WV7 Cluster: Putative uncharacterized protein; n=1; ... 35 2.9
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 35 2.9
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 34 5.1
UniRef50_O60293 Cluster: Coiled-coil domain-containing protein 1... 34 5.1
UniRef50_Q07U65 Cluster: SNF2-related protein; n=2; Proteobacter... 33 6.8
UniRef50_Q5CF53 Cluster: Putative uncharacterized protein; n=2; ... 33 9.0
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 192 bits (467), Expect = 1e-47
Identities = 88/122 (72%), Positives = 103/122 (84%)
Frame = -2
Query: 737 IQRKXPXIIFNQDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLD 558
+ RK P II+N+DQG TR+FRNIPGV+ LAPGGH+GRF+IWTQSAF RLD
Sbjct: 67 LHRKGPLIIYNKDQGLTRSFRNIPGVDMVNVNKLNLLHLAPGGHVGRFMIWTQSAFERLD 126
Query: 557 PLFGSWRTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTN 378
+FGSW+TPSK+KKNFNLPQPKMANTDL+RLLKS+EIR+VLRAP KRV+RATRKLNPLTN
Sbjct: 127 AIFGSWKTPSKEKKNFNLPQPKMANTDLSRLLKSEEIRRVLRAPIKRVVRATRKLNPLTN 186
Query: 377 NQ 372
+
Sbjct: 187 TK 188
Score = 79.4 bits (187), Expect = 1e-13
Identities = 39/61 (63%), Positives = 50/61 (81%)
Frame = -3
Query: 376 TKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRERRRKN 197
TKAMLKLNPYAAVLK+KA+L+ +RKN +AL AEK G+KL +PA+KA KL+E+R K+
Sbjct: 187 TKAMLKLNPYAAVLKKKAVLDQVKRKNKRALEVAEKRGIKLPDDDPAVKALKLKEKRAKS 246
Query: 196 I 194
I
Sbjct: 247 I 247
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 167 bits (407), Expect = 2e-40
Identities = 75/120 (62%), Positives = 94/120 (78%)
Frame = -2
Query: 737 IQRKXPXIIFNQDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLD 558
I R+ P +++++D+G +AFRNIPG+E LAPGGH+GRFVIWT+SAF RL+
Sbjct: 205 IARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLN 264
Query: 557 PLFGSWRTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTN 378
LFG+W+ PS KK +NLPQPKMANTDL+RLLKS+EIRKVLR P KRV R+ R+LNPLTN
Sbjct: 265 DLFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTN 324
Score = 47.6 bits (108), Expect = 4e-04
Identities = 25/58 (43%), Positives = 35/58 (60%)
Frame = -3
Query: 373 KAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRERRRK 200
+ ++KLNPYA VLKR+A L +R K LA A+K ++L+K + A A K R K
Sbjct: 326 RQLIKLNPYAEVLKRRAALAAEKRTVAKVLAKAKKQNVELAKSHFANVATKAAANRAK 383
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 143 bits (346), Expect = 6e-33
Identities = 69/148 (46%), Positives = 92/148 (62%)
Frame = -2
Query: 737 IQRKXPXIIFNQDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLD 558
IQR+ P II+N+D G +AFRNIPG+ LAPGGH+GRF IWT+SAF +LD
Sbjct: 202 IQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLD 261
Query: 557 PLFGSWRTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTN 378
L+G+WR + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N
Sbjct: 262 ELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKN 321
Query: 377 NQGDAETQSLRGRAEEESYLRAAQKEEL 294
+ + + LR A+ +L
Sbjct: 322 LRIMLKLNPYAKTMRRNTILRQARNHKL 349
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 124 bits (300), Expect = 2e-27
Identities = 62/122 (50%), Positives = 79/122 (64%), Gaps = 2/122 (1%)
Frame = -2
Query: 737 IQRKXPXIIFNQDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLD 558
+QR+ P +++++D G TRAFRNIPGVE LAPGGH+GRF+IWT+SAF +LD
Sbjct: 205 VQRRGPLVVYSEDNGVTRAFRNIPGVELCSVDRLGLLTLAPGGHVGRFIIWTKSAFEKLD 264
Query: 557 PLFGSWRTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIR--ATRKLNPL 384
+FG+ + S KK + P MA TDLTRL+ SDEI+ L AP IR A K NPL
Sbjct: 265 SIFGTSTSKSASKKGWKPPTNIMAQTDLTRLINSDEIQSALNAPKLGAIRAHAPLKRNPL 324
Query: 383 TN 378
N
Sbjct: 325 KN 326
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 109 bits (262), Expect = 9e-23
Identities = 60/129 (46%), Positives = 79/129 (61%), Gaps = 8/129 (6%)
Frame = -2
Query: 734 QRKXPXIIFNQDQGX---TRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGR 564
QR+ P +I+N D+ +AFRNIPGVE LAPGGHLGRF++WT SAFG
Sbjct: 182 QRRGPLVIYNPDEDGKELVKAFRNIPGVETSSVYSMNLLQLAPGGHLGRFIVWTSSAFGA 241
Query: 563 LDPLFGSWRTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLR-----APNKRVIRATR 399
LD ++GS PS KK+F LP M DL++++ S +I+KVLR A +KR + +
Sbjct: 242 LDTIYGSTTEPSALKKDFLLPSTMMKQPDLSKIINSSDIQKVLRPVRGGAVSKRGV--VQ 299
Query: 398 KLNPLTNNQ 372
K NPL N Q
Sbjct: 300 KKNPLKNFQ 308
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 105 bits (253), Expect = 1e-21
Identities = 54/122 (44%), Positives = 75/122 (61%), Gaps = 2/122 (1%)
Frame = -2
Query: 731 RKXPXII-FNQDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDP 555
RK P ++ FN++ +AFRN+PGVE LAPGG LGRFVIWTQSAF LD
Sbjct: 205 RKGPLVVYFNENAKLLKAFRNVPGVEVVNVTRLNLLQLAPGGQLGRFVIWTQSAFAHLDK 264
Query: 554 LFGSWRTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR-KVLRAPNKRVIRATRKLNPLTN 378
LFG++R S K + L +P + N DL R++ S++++ KV A +V+ +K NPL N
Sbjct: 265 LFGTYRYASVLKDGYQLLRPLLTNPDLARIINSNQVQEKVQPAKTTKVLHDVQKKNPLKN 324
Query: 377 NQ 372
+
Sbjct: 325 TK 326
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 105 bits (252), Expect = 1e-21
Identities = 54/122 (44%), Positives = 75/122 (61%), Gaps = 2/122 (1%)
Frame = -2
Query: 731 RKXPXII-FNQDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDP 555
RK P ++ FN++ +AFRN+PGVE LAPGG LGRFVIWTQSAF LD
Sbjct: 51 RKGPLVVYFNENAKLLKAFRNVPGVEVVNVTRLNLLQLAPGGQLGRFVIWTQSAFANLDK 110
Query: 554 LFGSWRTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR-KVLRAPNKRVIRATRKLNPLTN 378
LFG++R S K + L +P + N DL R++ S++++ KV A V+ +K NPL N
Sbjct: 111 LFGTYRYSSILKDGYQLLRPLLTNPDLARIINSNQVQEKVQAAKQTTVLHEVQKKNPLKN 170
Query: 377 NQ 372
++
Sbjct: 171 SK 172
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 98.7 bits (235), Expect = 2e-19
Identities = 53/127 (41%), Positives = 75/127 (59%), Gaps = 6/127 (4%)
Frame = -2
Query: 734 QRKXPXIIFN---QDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGR 564
QR+ P ++++ + RAFRN+PGVE LAPGGHLGRF+IW+ SAF
Sbjct: 205 QRRGPLVVYDGATDGKELVRAFRNLPGVETCDVYSLNLLQLAPGGHLGRFIIWSSSAFKA 264
Query: 563 LDPLFGSWRTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVI--RA-TRKL 393
LD ++G+ PS KK+F LP ++ D+ RL+ S E++ V+RA + RA +K
Sbjct: 265 LDNIYGTTTAPSALKKDFLLPSNVVSQADIGRLINSSELQSVIRAAKGSALTKRAGVQKK 324
Query: 392 NPLTNNQ 372
NPL N Q
Sbjct: 325 NPLLNKQ 331
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 95.5 bits (227), Expect = 1e-18
Identities = 55/154 (35%), Positives = 86/154 (55%), Gaps = 7/154 (4%)
Frame = -2
Query: 734 QRKXPXIIFNQDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDP 555
QR+ I+ +Q++G AFRNI GV+ LAPGGHLGRF+IWT+ A+ +LD
Sbjct: 203 QRRGVLIVHDQNEGLANAFRNISGVDISNVXRLNIRDLAPGGHLGRFIIWTEGAYKKLDK 262
Query: 554 LFGSWRTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRA---PNKRVIRATRKL--- 393
L+G+ + K + P P + NTDL+R++ S ++ VL+A +K++I R L
Sbjct: 263 LYGTRFRTALLKNEYKHPTPSVTNTDLSRIIHSPTVQSVLKARGKQSKKIINVRRNLLIA 322
Query: 392 NPLT-NNQGDAETQSLRGRAEEESYLRAAQKEEL 294
+ L+ NN Q LR + E+ A + ++
Sbjct: 323 SKLSQNNARIKRLQKLRKESGEDKKKEAKKSRKV 356
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 89.8 bits (213), Expect = 7e-17
Identities = 44/115 (38%), Positives = 65/115 (56%)
Frame = -2
Query: 722 PXIIFNQDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGS 543
P II++ D G +AFRNIPGV+ LAPGG +GR IW++ AF +LD ++G
Sbjct: 207 PLIIYSXDSGIKKAFRNIPGVDLCNVTKLNLLKLAPGGSIGRLCIWSEDAFKKLDVIYGK 266
Query: 542 WRTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTN 378
KKN+ LP+P + N D+ R++ SD+++ L + T+ N LTN
Sbjct: 267 TFQKYVTKKNYILPKPIVNNADIYRIINSDQVQASLLDKKSPCKKRTQNKNSLTN 321
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 88.6 bits (210), Expect = 2e-16
Identities = 47/121 (38%), Positives = 74/121 (61%), Gaps = 2/121 (1%)
Frame = -2
Query: 734 QRKXPXIIF-NQDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLD 558
+RK P +++ N D +AFRNIPGV+ LAPG H+GRF+IWT+SAF +L+
Sbjct: 204 ERKGPLVVYGNDDLQAVKAFRNIPGVDTCRVENLSVLNLAPGCHIGRFIIWTESAFKKLN 263
Query: 557 PLFGSWRTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVI-RATRKLNPLT 381
+FG+ + ++ K F + +MA D+ R++ + E K+LRA K V+ + ++ NPL
Sbjct: 264 TIFGTQKKMAQGKSGFRIAHAQMAVPDMKRVVVAAEKAKLLRA--KIVLPKVPKRANPLK 321
Query: 380 N 378
N
Sbjct: 322 N 322
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 83.4 bits (197), Expect = 6e-15
Identities = 38/97 (39%), Positives = 56/97 (57%)
Frame = -2
Query: 722 PXIIFNQDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGS 543
P +++ +D G +A RNI GV+ LAPGG GR I+T+ A RL ++GS
Sbjct: 210 PLVVYAEDNGIVKAMRNIKGVDTCSVERLNLLRLAPGGTFGRLTIFTKGAIKRLQEIYGS 269
Query: 542 WRTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLR 432
+ S K + LP+P M N D+TR++ S E++ VLR
Sbjct: 270 YTHGSSSKVGYTLPRPAMTNADITRIINSTEVQSVLR 306
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 83.4 bits (197), Expect = 6e-15
Identities = 56/165 (33%), Positives = 86/165 (52%), Gaps = 1/165 (0%)
Frame = -2
Query: 731 RKXPXIIFNQDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 552
+K P +I+N+D+G +AFRNIPGVE LAP +GR +WT+SAF LD +
Sbjct: 201 KKGPLVIYNEDKGIVKAFRNIPGVETISVKALALAKLAPAAQVGRLTVWTESAFKALDGI 260
Query: 551 FGSWRTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV-IRATRKLNPLTNN 375
+ S KK F+LP+ M N D+ ++ SD ++ VL + V + R L+
Sbjct: 261 YES-------KKRFSLPRSIMTNADIEAVITSDAVQSVLNEKKEVVPLPKCRCCKKLSVG 313
Query: 374 QGDAETQSLRGRAEEESYLRAAQKEELEGSC*CREEWIEAV*AKP 240
+ ++L+ AE LRAAQ+ + + + EAV A+P
Sbjct: 314 ACEDWQKALKEVAE----LRAAQEAKRTSPEVVKAVFAEAVAAQP 354
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 81.8 bits (193), Expect = 2e-14
Identities = 42/122 (34%), Positives = 69/122 (56%)
Frame = -2
Query: 737 IQRKXPXIIFNQDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLD 558
I RK P +I+N + R FRN+PGV+ LAPG H GR ++WT+SAF LD
Sbjct: 190 ITRKGPLVIYNTED-VARGFRNLPGVDLCHVSSIRLLELAPGSHPGRLILWTKSAFASLD 248
Query: 557 PLFGSWRTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTN 378
++ + K+N+ LP+ + TD+ R+L+SD ++K P + + RK++P ++
Sbjct: 249 DVYAA-------KQNYTLPRSCITQTDIERILQSDAVQKTF-VPKRDPLVIERKVDPFSS 300
Query: 377 NQ 372
+
Sbjct: 301 KE 302
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 77.0 bits (181), Expect = 6e-13
Identities = 34/66 (51%), Positives = 46/66 (69%)
Frame = -2
Query: 575 AFGRLDPLFGSWRTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRK 396
AF +LD L+G+W + K N+NLP KM NTDL+R+LKS EI++ L+AP K++ R K
Sbjct: 95 AFCKLDDLYGTWHKAASLKSNYNLPMHKMLNTDLSRILKSPEIQRALQAPRKKIHRRVLK 154
Query: 395 LNPLTN 378
NPL N
Sbjct: 155 KNPLKN 160
Score = 33.5 bits (73), Expect = 6.8
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -3
Query: 367 MLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEK 221
MLKLNPYA ++R I LR+ KN K D + L+ + +K
Sbjct: 164 MLKLNPYAKTMRRNTI--LRQAKNHKLRMDKSAAALEAKSEEKGVPGKK 210
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 71.3 bits (167), Expect = 3e-11
Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = -2
Query: 575 AFGRLDPLFGSWRTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV-IRATR 399
AF +LD L+G+W + K N+NLP KM NTDL+R+LK I++ LRAP KR+ R +
Sbjct: 173 AFCKLDDLYGTWPKAASLKSNYNLPMHKMLNTDLSRILKRPGIQRALRAPRKRIHRRVLK 232
Query: 398 KLNPLTN 378
K NPL N
Sbjct: 233 KKNPLKN 239
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 69.3 bits (162), Expect = 1e-10
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = -2
Query: 737 IQRKXPXIIFNQDQGX-TRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRL 561
I RK P I++ + +AFRNIPGVE LAPGGHLGRFVIWT+S+F +L
Sbjct: 65 ISRKGPLIVYGMEGAKLVKAFRNIPGVEVANVDRLNLLKLAPGGHLGRFVIWTKSSFEKL 124
Query: 560 DPLFGSWRTPSKQKK 516
D ++ S+ ++++
Sbjct: 125 DSIYRSFEKKLRRRR 139
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 66.5 bits (155), Expect = 8e-10
Identities = 37/103 (35%), Positives = 52/103 (50%)
Frame = -2
Query: 734 QRKXPXIIFNQDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDP 555
QRK +I + + FRNI GV+ LAPGG GR +IWT+SAF +LD
Sbjct: 200 QRKG-ILIVHGESSEMLGFRNIRGVDQMSIDSLDLLELAPGGVAGRLIIWTESAFEKLDK 258
Query: 554 LFGSWRTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP 426
+FG ++ F LP + + DL L SD ++ +L P
Sbjct: 259 IFGGVEREAELTPGFKLPNRIVTHDDLEELFYSDAVQAILDEP 301
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 60.1 bits (139), Expect = 7e-08
Identities = 37/97 (38%), Positives = 49/97 (50%)
Frame = -2
Query: 686 RAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWRTPSKQKKNFN 507
RAFRNIPGVE LAP G LGR +W++SAF LD
Sbjct: 213 RAFRNIPGVEVACVERLNLLKLAPAGALGRLCVWSKSAFEALDDYIKM------------ 260
Query: 506 LPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRK 396
+P + N DL+ L++S ++ LRAP + +ATRK
Sbjct: 261 MPTKLLKNADLSALIESTPVQAALRAPREGTPKATRK 297
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 47.6 bits (108), Expect = 4e-04
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = -2
Query: 716 IIFNQDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLD 558
++ +Q G +A RNIPGV+ LAPGG GR +WT++A G L+
Sbjct: 252 LVVSQTNGLAKAARNIPGVDIVVAKDLSAEDLAPGGDAGRLTVWTKAAIGALE 304
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = -2
Query: 737 IQRKXPXIIFNQDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSA 573
+++K ++ +D G +A +N+PGV+ LAPG H GR +WT+SA
Sbjct: 189 VKKKSVLLVVGKDDGVVKAAKNLPGVDAVVVKDLNVELLAPGCHPGRLTVWTKSA 243
>UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal
protein L4; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L4 - Rattus norvegicus
Length = 140
Score = 44.0 bits (99), Expect = 0.005
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = -2
Query: 494 KMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTN 378
KM N+DL+R+LK EI++ L+AP K + K NPLTN
Sbjct: 3 KMMNSDLSRILKIPEIQRALQAPCKEIQHRVSKKNPLTN 41
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 43.6 bits (98), Expect = 0.006
Identities = 23/43 (53%), Positives = 27/43 (62%)
Frame = -2
Query: 686 RAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLD 558
RAFRNIPGV+ LAP G LGR VI+++SAF LD
Sbjct: 212 RAFRNIPGVDVMSVEHMNLLKLAPAGTLGRLVIFSKSAFELLD 254
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 42.7 bits (96), Expect = 0.011
Identities = 22/60 (36%), Positives = 30/60 (50%)
Frame = -2
Query: 728 KXPXIIFNQDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLF 549
K P ++ D+G + RN GV+ LAPG H GR I+T+SA +L LF
Sbjct: 195 KGPLVVVGNDRGISLGARNHAGVDVVEVNNINAELLAPGTHAGRLTIYTKSAIEKLGDLF 254
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 38.7 bits (86), Expect = 0.18
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = -2
Query: 722 PXIIFNQDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPL 552
P ++F + ++ RNI ++ LAPGGHLGR IW+ AF L+ +
Sbjct: 201 PLLVFKNN---LKSLRNIANIDCMKISALNLTKLAPGGHLGRLCIWSSKAFQMLNTI 254
>UniRef50_Q6M9P8 Cluster: Putative cytochrome-c oxidase fixO chain;
n=1; Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative cytochrome-c oxidase fixO chain -
Protochlamydia amoebophila (strain UWE25)
Length = 415
Score = 37.9 bits (84), Expect = 0.32
Identities = 24/75 (32%), Positives = 41/75 (54%)
Frame = -2
Query: 521 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNQGDAETQSLRG 342
K+N++L K +N RL+ S + K + N ++ T +L L QG+A+ Q+ +
Sbjct: 75 KQNYSLLAFKESNN--LRLVTSQGLEKYITKVNDSTLKLTSRLLLLREPQGEAKKQAEQL 132
Query: 341 RAEEESYLRAAQKEE 297
A ++S + AQKEE
Sbjct: 133 LASQQSTTKIAQKEE 147
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 37.9 bits (84), Expect = 0.32
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = -2
Query: 737 IQRKXPXIIFNQDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLD 558
++ K I+ ++D+G RN PGV+ LAPG H GR ++T A L+
Sbjct: 196 VKPKSVLIVVDEDEGIKLGARNHPGVDVVEAMHLGVEHLAPGAHPGRLTVFTPGALEVLE 255
Query: 557 PLFG 546
G
Sbjct: 256 ERLG 259
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 35.5 bits (78), Expect = 1.7
Identities = 19/45 (42%), Positives = 22/45 (48%)
Frame = -2
Query: 683 AFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLF 549
A RN PGV+ LAPGG GR +WT A +L LF
Sbjct: 238 AVRNFPGVDVVAVNNLNILVLAPGGVPGRLTLWTAPAVEKLRGLF 282
>UniRef50_Q54WV7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 987
Score = 34.7 bits (76), Expect = 2.9
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = -3
Query: 337 LKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRERR 206
+K K+ ++ ++K KALA E+ +KL KAEKL ERR
Sbjct: 410 IKSKSFRKVEKKKKEKALAKREEELMKLDPEFAKHKAEKLEERR 453
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 34.7 bits (76), Expect = 2.9
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -2
Query: 716 IIFNQDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLD 558
I+ + + +A RN+ GV+ LAPG H GR I+T+S+ LD
Sbjct: 206 IVHDSNSPIIKAARNLAGVDVVNAKDVSVIHLAPGAHPGRLTIYTESSIKILD 258
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 33.9 bits (74), Expect = 5.1
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -2
Query: 716 IIFNQDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRL 561
+I ++ +AFR++PGV+ LAPGG GR I+T+ A L
Sbjct: 199 LIVARNSSAMKAFRSLPGVDIASPNSLSIRKLAPGGVGGRLTIFTEGAIESL 250
>UniRef50_O60293 Cluster: Coiled-coil domain-containing protein 131;
n=26; Amniota|Rep: Coiled-coil domain-containing protein
131 - Homo sapiens (Human)
Length = 1989
Score = 33.9 bits (74), Expect = 5.1
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Frame = -2
Query: 560 DPLFGSWRTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP-NKRV-IRATRKLNP 387
DPL P ++K + L + ++AN + RL+KSD+++ +P N V I ++
Sbjct: 762 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSPANSDVEIDGIGRIAM 821
Query: 386 LTNNQGDAETQSLRGR---AEEESYLRAAQKEE 297
+T DAE++ + R ++ES L+ ++E
Sbjct: 822 VTKQVTDAESKLKKHRILLMKDESVLKNLVQQE 854
>UniRef50_Q07U65 Cluster: SNF2-related protein; n=2;
Proteobacteria|Rep: SNF2-related protein -
Rhodopseudomonas palustris (strain BisA53)
Length = 963
Score = 33.5 bits (73), Expect = 6.8
Identities = 26/65 (40%), Positives = 34/65 (52%)
Frame = -3
Query: 397 N*TRSLTTKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKL 218
N +R+ + +KL YA L+ RR K LKA ADA K L+ S+ P AEK+
Sbjct: 849 NQSRNWLDEETVKLEAYAEDLESA---NNRRAKELKAEADAAKRALRGSQSIPL--AEKI 903
Query: 217 RERRR 203
E RR
Sbjct: 904 EEERR 908
>UniRef50_Q5CF53 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 1055
Score = 33.1 bits (72), Expect = 9.0
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = -2
Query: 545 SWRTPSKQKKNFNLPQPKMANTDLTRLL--KSDEIRKVLRAPNK-RVIRATRKLNPLTNN 375
S + PSK KK + + L + KS++IR V+++ K V TRK+N
Sbjct: 574 SIKAPSKVKKKSEKKEEALNKLRLKAEISEKSEKIRGVIKSERKSNVSERTRKMNERKEK 633
Query: 374 QGDAETQSLRGRAEEESYLRAA 309
Q + + R R EEE R A
Sbjct: 634 QKACKERERREREEEERRRRDA 655
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,359,863
Number of Sequences: 1657284
Number of extensions: 11129052
Number of successful extensions: 30144
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 28833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30110
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73783549980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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