Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_O05
         (835 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    26   0.32 
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    23   2.3  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   3.0  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   5.2  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   6.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.1  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 26.2 bits (55), Expect = 0.32
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -2

Query: 474 ERSTKRREPEKINTNRTIDITKTTNMTDTVRKRRTFTKRNTSRPG 340
           ER T+RR    + T +++ +TK  +++ +V + R       SRPG
Sbjct: 29  ERVTRRRLRRPLKTTQSVSVTKDQDVSSSVNRFRL-----RSRPG 68


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/47 (23%), Positives = 21/47 (44%)
 Frame = -1

Query: 430 SHDRHYKNDEYDRYSSKKKDVYQEKHKSSRSSKDYDRQRYRDGSEEE 290
           S D H  + +   +  +K+ V   K ++    + + +QRY    E E
Sbjct: 25  SKDPHLTDQQASGHKKRKRRVLFSKAQTYELERRFRQQRYLSAPERE 71


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 17/57 (29%), Positives = 22/57 (38%)
 Frame = +1

Query: 166 DDGGSSWYCATVADP*TAHTYRTCRGRGAAGSATAWLASCPSPPPTRLCTFACRNPC 336
           D G  +   A VA+  TA  +    G G        + S P PPP  L +     PC
Sbjct: 174 DRGRVAAAAAMVAE--TASFHHDAAGYGLRNYGPEPVPSTPYPPPGSLGSMGVSVPC 228


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 394 RYSSKKKDVYQEKHKSSRSSKD 329
           R+  +KK++ ++ HKS   S D
Sbjct: 235 RFKDEKKELIRQTHKSPSHSVD 256


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = -1

Query: 427 HDRHYKNDEYDRYSSKKKDVYQEKHKSSRSSKDYDRQR 314
           H+RH+++   +   S+K    + K + S  S  +  +R
Sbjct: 92  HERHFESSFGNNLHSEKAKFNESKWQDSGESPGFTTER 129


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +1

Query: 397 HIRRFCNVYRAICIYLFWFS 456
           H+  +C +   +CIY F+++
Sbjct: 225 HLLFYCVLIILLCIYYFYYA 244


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,879
Number of Sequences: 336
Number of extensions: 2448
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22932949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)