Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_O05
(835 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0373 - 2904914-2904949,2905030-2905144,2906446-2906534,290... 36 0.053
03_03_0192 - 15308602-15308869,15309457-15309528,15310271-153103... 33 0.37
05_01_0538 + 4646772-4647059,4647462-4647542,4647819-4647890,464... 31 0.86
07_01_0463 + 3502708-3503535 30 2.0
10_08_0442 + 17957358-17958075,17958156-17958242,17958547-179586... 29 3.5
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 29 3.5
05_06_0248 + 26673107-26674351 29 4.6
02_03_0387 - 18412064-18412144,18412280-18412361,18412922-184131... 29 4.6
01_06_1531 + 38024757-38024790,38025592-38025803,38026111-380262... 29 4.6
11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717 29 6.0
05_03_0620 - 16286207-16286342,16286861-16286955,16287051-162871... 29 6.0
03_06_0670 + 35434203-35434355,35436601-35436729,35436978-354384... 29 6.0
03_02_0509 - 9003330-9003446,9003587-9003673,9004113-9004280,900... 29 6.0
12_02_1279 + 27510605-27513301 24 6.6
08_02_0526 + 18184146-18184168,18184247-18184438,18184846-181849... 28 8.0
07_03_1405 + 26340645-26340921,26341003-26341226,26341315-263415... 28 8.0
03_05_0459 + 24533233-24533278,24533881-24534167,24534287-245345... 28 8.0
02_01_0752 - 5583757-5584092 28 8.0
>03_01_0373 -
2904914-2904949,2905030-2905144,2906446-2906534,
2906670-2906889,2907921-2907985,2908619-2908879,
2909204-2909417,2910643-2910698,2910891-2910947,
2911043-2911115,2912711-2913225
Length = 566
Score = 35.5 bits (78), Expect = 0.053
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = -1
Query: 412 KNDEYDRYSSKKKDVYQEKHKSSRSSKDYDRQRYRDGSEEE 290
K+ + DR+ + KD +++H+SSR +D DR R RD + E
Sbjct: 69 KDKDRDRHRDRDKD--RDRHRSSRERRDRDRDRDRDEKDRE 107
>03_03_0192 -
15308602-15308869,15309457-15309528,15310271-15310337,
15310449-15310528,15310636-15310714,15310815-15310890
Length = 213
Score = 32.7 bits (71), Expect = 0.37
Identities = 16/41 (39%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = -1
Query: 424 DRHYKNDEYDRYSSKKKDVYQEK-HKSSRSSKDYDRQRYRD 305
DR Y++D DR+ +D YQ++ ++ SRS + Y+R+RY++
Sbjct: 132 DRGYRDDYRDRHY---RDDYQDREYRRSRSIERYERERYQE 169
Score = 31.9 bits (69), Expect = 0.65
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 10/51 (19%)
Frame = -1
Query: 424 DRHYKNDEYDRYSSKKKDV-------YQEK--HKSSRS-SKDYDRQRYRDG 302
DRHY++D DR + + + YQEK + SRS S DYDR+ ++G
Sbjct: 141 DRHYRDDYQDREYRRSRSIERYERERYQEKGYRRRSRSISPDYDRRHRKNG 191
>05_01_0538 +
4646772-4647059,4647462-4647542,4647819-4647890,
4648458-4649321
Length = 434
Score = 31.5 bits (68), Expect = 0.86
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = -1
Query: 430 SHDRHYKNDEYDRYSSKKKDVYQEKHKSSRSSKDYDR---QRYRDGSEEE 290
+HD H K+ R S ++ +++ RSS+DYDR R RD S +
Sbjct: 229 THDGHRKSSSPSRRSGSREVPDRDRSSRDRSSRDYDRSSHDRDRDHSSRD 278
>07_01_0463 + 3502708-3503535
Length = 275
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = -1
Query: 412 KNDEYDRYSS--KKKDVYQEKHKSSRSSKDYDRQRYRDGSEEE 290
K+DE+D KKK+ ++ K +S K + ++ +DG EEE
Sbjct: 91 KDDEHDDEDEEGKKKEKEMKEKKKDKSDKKEEGKKKKDGDEEE 133
>10_08_0442 +
17957358-17958075,17958156-17958242,17958547-17958647,
17958766-17958834,17958989-17959156
Length = 380
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Frame = -1
Query: 412 KNDEYDRYSSKKKDVYQEKHKSSRSSKD------YDRQRYRDGSEE 293
++D+Y RY K+ D H+ SRS ++ YDR + RDG+ +
Sbjct: 66 RHDDYRRYHDKRGDDNDRGHRISRSERESRSDTYYDRTK-RDGTSD 110
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -1
Query: 430 SHDR-HYKNDEYDRYSSKKKDVYQEKHKSSRSSKDYDRQRYRDGSEE 293
+ DR + K+++Y+RY K + +H SK R +YRDG ++
Sbjct: 468 NRDRGNQKHEDYNRYC-KPGERSSSRHDDRGYSKHESRSKYRDGDDD 513
>05_06_0248 + 26673107-26674351
Length = 414
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -2
Query: 465 TKRREPEKINTNRTIDITKTTNMTDTVRKRRTFTKR 358
+KR+ PEK T TKTT ++T +RR+ TKR
Sbjct: 185 SKRKLPEKYPVVGTSPTTKTTTTSETAAERRS-TKR 219
>02_03_0387 -
18412064-18412144,18412280-18412361,18412922-18413142,
18413387-18413745,18413834-18414443,18414546-18414605,
18414685-18414751,18414843-18414936,18415012-18415125,
18415242-18415308,18415386-18415551,18416587-18417080
Length = 804
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 424 DRHY-KNDEYDRYSSKKKDVYQEKHKSSRSSKDYDRQRYRDGSEEE 290
DRH K E +R + +++ ++ H S R +D DR+ YR+ +++
Sbjct: 9 DRHRDKEKEKERRETHRREE-KDHHGSGRRDRDRDRESYREKDKDD 53
>01_06_1531 +
38024757-38024790,38025592-38025803,38026111-38026248,
38026405-38026449,38026499-38026591,38028072-38028815
Length = 421
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 380 KEGRLPRETQVVQEQQGLRQAKVQRRVGGG 291
KEG LPRE + E G++ A GGG
Sbjct: 170 KEGNLPREEAMKMESPGVQPAAAGEEEGGG 199
>11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717
Length = 1055
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/65 (23%), Positives = 31/65 (47%)
Frame = -2
Query: 570 TPAVALATRQKANPNRNARKNGNAEARAPAIPERSTKRREPEKINTNRTIDITKTTNMTD 391
T ++ T++ N NR+A+KN N A + ++ +K + T+ +K+ T
Sbjct: 496 TDDTSIKTKKSKNKNRSAKKNKNTSKDADGLETVGASKKLSKKA-VDETLSDSKSARRTR 554
Query: 390 TVRKR 376
+ R +
Sbjct: 555 STRMK 559
>05_03_0620 -
16286207-16286342,16286861-16286955,16287051-16287158,
16287262-16287357,16287446-16287604
Length = 197
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 289 SPPPTRLCTFACRNPCCSWTTCVSLGKRPSFSNCICH 399
SPPP R R+P + TT S GKR + C+ H
Sbjct: 16 SPPPRRQAALLRRHPAAT-TTSSSSGKRTTRLLCLLH 51
>03_06_0670 +
35434203-35434355,35436601-35436729,35436978-35438409,
35438524-35439014
Length = 734
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -1
Query: 412 KNDEYDRYSSKKKDVYQEKHKSSRSSKDYDRQ 317
K+D +++ K+KD ++EK + + K+ D Q
Sbjct: 480 KSDRHEKKKRKEKDKHKEKKRDKEAKKEKDEQ 511
>03_02_0509 -
9003330-9003446,9003587-9003673,9004113-9004280,
9004835-9004957,9005081-9005170,9005275-9005295
Length = 201
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/32 (31%), Positives = 23/32 (71%)
Frame = -1
Query: 385 SKKKDVYQEKHKSSRSSKDYDRQRYRDGSEEE 290
+K+ ++ Q+K + SR +++ ++R +DG E+E
Sbjct: 125 AKEAEIQQKKAEESRIAQEIQKKREKDGREQE 156
>12_02_1279 + 27510605-27513301
Length = 898
Score = 23.8 bits (49), Expect(2) = 6.6
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 319 ACRNPCCSWTTCVSLGKRPSFSNCICHIRRFCNVYR 426
ACRN C + +C+ R S +C R +++R
Sbjct: 393 ACRNLCSANCSCLGFFYRNSSKSCFLLNYRIGSLFR 428
Score = 23.0 bits (47), Expect(2) = 6.6
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = +1
Query: 139 CNVCNLMFTDDGGSSWYCATVADP*TAHTYRTCRGRGAAGSATAWLASCPSPPP 300
C L GSS C P TY T A GSA LA +PPP
Sbjct: 315 CRSLGLCTPGTNGSSCSC-----PDAFSTYSTGGCAPADGSALPLLADTCAPPP 363
>08_02_0526 +
18184146-18184168,18184247-18184438,18184846-18184954,
18185071-18185220,18185973-18186136,18186273-18186359,
18187083-18187137,18187911-18188333
Length = 400
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = -2
Query: 519 ARKNGNAEARAPAIPERSTKRREPEKINTNRTIDITKTTNMTDTVRKRRTFTKRNTSR 346
A +NG +++++P RST R P K + +R+ + + + + R RR R+ SR
Sbjct: 18 ADRNGTSKSKSPTPVRRSTSRSPPPKKSDSRS-PPPRRRSTSRSPRPRRHGRSRSRSR 74
>07_03_1405 +
26340645-26340921,26341003-26341226,26341315-26341562,
26341622-26342051,26342630-26343049
Length = 532
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 498 EARAPAIPERSTKRREPEKINTNRTIDITKT 406
EA AP PE TKRR+P ++ + ID KT
Sbjct: 304 EASAP--PELGTKRRQPPVLSMDEIIDECKT 332
>03_05_0459 +
24533233-24533278,24533881-24534167,24534287-24534568,
24534628-24534682,24534895-24534935,24537484-24537549
Length = 258
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = -1
Query: 427 HDRHYKNDEYDRYSSKKKDVYQEKHKSSRSSKDYDRQRYRDGSEEE 290
H RH + D+ D+Y KD + KH+ SKD ++++ ++ +E+
Sbjct: 134 HKRHKEKDK-DKY----KDQKKHKHRHKDRSKDKEKEKEKEKEKEK 174
>02_01_0752 - 5583757-5584092
Length = 111
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +1
Query: 241 GRGAAGSATAWLASCPSPPPTRLCTFACRNPCCSWTTCVSLGKRP 375
GR +A T + + S PP +C N C CV + + P
Sbjct: 67 GRSSAAVVTVQMPTLASWPPVVAVWHSCDNYVCGLVGCVGVDREP 111
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,632,651
Number of Sequences: 37544
Number of extensions: 273935
Number of successful extensions: 1276
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1269
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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