Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_O04
         (897 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47357-5|CAA87424.1|  446|Caenorhabditis elegans Hypothetical pr...   108   5e-24
AF000265-9|AAB52943.2|  449|Caenorhabditis elegans Hypothetical ...    94   1e-19
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p...    31   1.1  
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p...    31   1.1  
Z77664-1|CAB01216.2|  900|Caenorhabditis elegans Hypothetical pr...    30   2.0  
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ...    30   2.0  
U61949-6|AAB03154.1|  166|Caenorhabditis elegans Hypothetical pr...    30   2.6  
Z81110-1|CAB03258.2|  322|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AF370362-1|AAK52515.1|  322|Caenorhabditis elegans putative tran...    29   3.4  
AF068713-4|AAC17795.2|  398|Caenorhabditis elegans Hypothetical ...    29   6.0  
AF000193-1|AAB52891.1|  715|Caenorhabditis elegans Hypothetical ...    29   6.0  

>Z47357-5|CAA87424.1|  446|Caenorhabditis elegans Hypothetical
           protein ZK1128.5 protein.
          Length = 446

 Score =  108 bits (260), Expect = 5e-24
 Identities = 53/115 (46%), Positives = 75/115 (65%)
 Frame = -3

Query: 484 PSSSNHVIAVEPPHDAKQTACYDIDVEVDDTLKAQMNNFLLSTANQQEIQGLDSKIHETV 305
           P   NH+I        K +ACYDIDVE++D +K QM NF+ +  N  +IQ LD KI + V
Sbjct: 300 PLVLNHIIQRPDDGQDKTSACYDIDVELEDPVKQQMANFVHNQTNANDIQLLDQKIFDLV 359

Query: 304 DTINQLKTNREFFLSFSKDPQQFIQKWLVSQSRDLKSMSGGAGGNPEEERRAQFY 140
           D IN++K  R+FFL FS +P  FI+KW+VSQ+ DLK+++  + G+ E +R A  Y
Sbjct: 360 DQINEMKLRRDFFLRFSNEPSGFIKKWVVSQNSDLKTLT-ESSGDGESDRYATTY 413


>AF000265-9|AAB52943.2|  449|Caenorhabditis elegans Hypothetical
           protein C18E3.2 protein.
          Length = 449

 Score = 94.3 bits (224), Expect = 1e-19
 Identities = 45/115 (39%), Positives = 71/115 (61%)
 Frame = -3

Query: 484 PSSSNHVIAVEPPHDAKQTACYDIDVEVDDTLKAQMNNFLLSTANQQEIQGLDSKIHETV 305
           P   NH+I        + + CYDIDVE++D +K  M+ F+ S     +IQ LD K ++ +
Sbjct: 303 PLEFNHIIQRPKEGQEQVSTCYDIDVEMEDPVKQFMHTFVHSPGLANDIQTLDQKCYDII 362

Query: 304 DTINQLKTNREFFLSFSKDPQQFIQKWLVSQSRDLKSMSGGAGGNPEEERRAQFY 140
           + IN+LKT R+F+  F  +P +FI+ W++SQ+ DLK+M+    G+ E ER A+ Y
Sbjct: 363 EQINELKTRRDFYARFYTEPAEFIKSWVMSQNSDLKTMN-ELSGDLEAERFAESY 416


>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
           protein T07C4.10 protein.
          Length = 1013

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = -3

Query: 331 LDSKIHETVDTINQLKTNREFFLSFSKDPQQFIQKWLVSQSRDLKSMSGGAGGNPEEER 155
           LD K+  T++ I +L    E F    +DP+    +     S+ LKS+  GA      ER
Sbjct: 715 LDEKLRRTIEKIGELLAEHESFQESLRDPEFHTAEAFRKISQLLKSILSGANSEEMLER 773


>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
           protein T07C4.10 protein.
          Length = 1013

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = -3

Query: 331 LDSKIHETVDTINQLKTNREFFLSFSKDPQQFIQKWLVSQSRDLKSMSGGAGGNPEEER 155
           LD K+  T++ I +L    E F    +DP+    +     S+ LKS+  GA      ER
Sbjct: 715 LDEKLRRTIEKIGELLAEHESFQESLRDPEFHTAEAFRKISQLLKSILSGANSEEMLER 773


>Z77664-1|CAB01216.2|  900|Caenorhabditis elegans Hypothetical
           protein F53H10.2 protein.
          Length = 900

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 16/42 (38%), Positives = 18/42 (42%)
 Frame = -1

Query: 678 GGPVNI*TAPXASNVKTXPPCRXPQRGASXIACDRYLRARSS 553
           G P+NI T P      T PP   P R  S + C     A SS
Sbjct: 297 GTPLNISTVPGTELPYTPPPILAPMRNGSGLFCQIVKSANSS 338


>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
           protein H06I04.5 protein.
          Length = 1138

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +2

Query: 224 PLLDELLRILAEAQEELAVCFQLVDGVHSL 313
           P  +E+  IL   Q++L    QL+DG+HSL
Sbjct: 432 PKFEEVKTILVTFQQDLGSLRQLIDGIHSL 461


>U61949-6|AAB03154.1|  166|Caenorhabditis elegans Hypothetical
           protein F49E8.6 protein.
          Length = 166

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 20/55 (36%), Positives = 23/55 (41%)
 Frame = +2

Query: 665 LTGPPFSXXXPXKXXPXPPGSPFKLQXXGNSXXPXGXFDPXXLVPRVPXPLETXP 829
           L GP FS   P +  P  PGS +     GNS  P   F P    P  P P  + P
Sbjct: 88  LDGPDFSNRVPDRNIPPAPGS-YYFYSHGNSSTP--SFAPPYCAP-PPGPSSSAP 138


>Z81110-1|CAB03258.2|  322|Caenorhabditis elegans Hypothetical
           protein T01D3.2 protein.
          Length = 322

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 14/54 (25%), Positives = 26/54 (48%)
 Frame = -3

Query: 463 IAVEPPHDAKQTACYDIDVEVDDTLKAQMNNFLLSTANQQEIQGLDSKIHETVD 302
           I + P  + +  ACY +   V  T+    N+F++ T+    I   D K H+ ++
Sbjct: 186 ITMGPNTNTRMIACYPMPTPVLSTVTIPSNSFVIITSIDLHITFADEKAHQLLN 239


>AF370362-1|AAK52515.1|  322|Caenorhabditis elegans putative
           transcription factor T01D3.2protein.
          Length = 322

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 14/54 (25%), Positives = 26/54 (48%)
 Frame = -3

Query: 463 IAVEPPHDAKQTACYDIDVEVDDTLKAQMNNFLLSTANQQEIQGLDSKIHETVD 302
           I + P  + +  ACY +   V  T+    N+F++ T+    I   D K H+ ++
Sbjct: 186 ITMGPNTNTRMIACYPMPTPVLSTVTIPSNSFVIITSIDLHITFADEKAHQLLN 239


>AF068713-4|AAC17795.2|  398|Caenorhabditis elegans Hypothetical
           protein T24A6.8 protein.
          Length = 398

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -2

Query: 356 RQPAGDPRPRLQDPRDCGHHQPVENKPRVLLELQQ 252
           RQP G  RP + +P  C H  P     R+ ++  +
Sbjct: 262 RQPDGTQRPGVNEPHYCAHTVPFGPMKRIKIQFNE 296


>AF000193-1|AAB52891.1|  715|Caenorhabditis elegans Hypothetical
           protein T20B6.2 protein.
          Length = 715

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 221 EPLLDELLRILAEAQEELAVCFQLVDGVHSL 313
           +P  +E+  IL   Q+ L    QL++G+HSL
Sbjct: 188 DPKFEEVKTILVTFQQHLVSLKQLIEGIHSL 218


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,350,242
Number of Sequences: 27780
Number of extensions: 214156
Number of successful extensions: 693
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)