Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_O01
         (788 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    25   0.69 
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   2.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.9  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    22   4.9  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.9  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.9  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   6.4  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   6.4  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
 Frame = -1

Query: 578 RRLLDPAHTQERLRDSVDGLRRSSSRADLPGHGGHHCHGQ---VN*HREGDRSTHH 420
           RR+ +  ++Q +     +    +++  +   H GHH H Q   VN H   + S  H
Sbjct: 294 RRMKNKKNSQRQAAQQQNNNNAATNNQNHHHHAGHHIHAQHHVVNHHVAANGSLKH 349


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +3

Query: 573 PPGMMASRLSXPPVTPPACLSMSSLXRDAHLLL 671
           PP      L  PP+ PP  ++ S++   A  L+
Sbjct: 175 PPLPQVPPLPLPPIFPPTMINPSAICESAAQLI 207


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 503 RADLPGHGGHHCH 465
           RAD PG+   HCH
Sbjct: 660 RADNPGYWLFHCH 672


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 382 CREGVSWMNKIIYRFV 335
           C E   W NK+I +F+
Sbjct: 177 CVENRKWQNKVIQKFL 192


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 382 CREGVSWMNKIIYRFV 335
           C E   W NK+I +F+
Sbjct: 410 CVENRKWQNKVIQKFL 425


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 382 CREGVSWMNKIIYRFV 335
           C E   W NK+I +F+
Sbjct: 410 CVENRKWQNKVIQKFL 425


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +2

Query: 266 RVPFDLFRN 292
           RVPFDLF N
Sbjct: 335 RVPFDLFEN 343


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = -3

Query: 693 REHAVHRGGGDEHPAXRSSLRGTRAESPA 607
           R H VH   G E  A R+     RA   A
Sbjct: 259 RHHLVHHKCGGEEEAERAPAPAVRAAGDA 287


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,345
Number of Sequences: 336
Number of extensions: 3676
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)