Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_O01
(788 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456739-1|CAG33020.1| 464|Homo sapiens NDUFV1 protein. 302 8e-82
BC015645-1|AAH15645.1| 464|Homo sapiens NADH dehydrogenase (ubi... 302 8e-82
BC008146-1|AAH08146.1| 455|Homo sapiens NDUFV1 protein protein. 302 8e-82
BC007619-1|AAH07619.1| 354|Homo sapiens Unknown (protein for IM... 302 8e-82
AK223061-1|BAD96781.1| 464|Homo sapiens NADH dehydrogenase (ubi... 302 8e-82
AF053070-1|AAC39722.1| 464|Homo sapiens NADH:ubiquinone dehydro... 302 8e-82
AF053069-1|AAC39750.1| 464|Homo sapiens NADH:ubiquinone dehydro... 302 8e-82
Y17379-1|CAA76757.1| 464|Homo sapiens NADH:ubiquinone oxidoredu... 295 9e-80
S67973-1|AAB29698.2| 257|Homo sapiens NADH:ubiquinone oxidoredu... 68 3e-11
AB115770-1|BAC98378.1| 747|Homo sapiens actin-bundling protein ... 33 1.2
BC105006-1|AAI05007.1| 312|Homo sapiens PRP38 pre-mRNA processi... 31 4.7
BC105004-1|AAI05005.1| 312|Homo sapiens PRP38 pre-mRNA processi... 31 4.7
BC063655-1|AAH63655.1| 125|Homo sapiens PRP38 pre-mRNA processi... 31 4.7
BC000777-1|AAH00777.2| 125|Homo sapiens PRP38 pre-mRNA processi... 31 4.7
AL513218-9|CAI12289.1| 312|Homo sapiens PRP38 pre-mRNA processi... 31 4.7
AK092038-1|BAC03796.1| 312|Homo sapiens protein ( Homo sapiens ... 31 4.7
AK027842-1|BAB55405.1| 236|Homo sapiens protein ( Homo sapiens ... 31 4.7
AK096219-1|BAC04728.1| 131|Homo sapiens protein ( Homo sapiens ... 31 6.3
AJ296168-1|CAC27563.1| 106|Homo sapiens keratin associated prot... 30 8.3
>CR456739-1|CAG33020.1| 464|Homo sapiens NDUFV1 protein.
Length = 464
Score = 302 bits (742), Expect = 8e-82
Identities = 137/166 (82%), Positives = 149/166 (89%)
Frame = -2
Query: 646 KELIERHAGGVTGGWDNLLAIIPGGSSTPLIPKNVCETVLMDFDGLVAAQTSLGTAAIIV 467
KELIE+HAGGVTGGWDNLLA+IPGGSSTPLIPK+VCETVLMDFD LV AQT LGTAA+IV
Sbjct: 297 KELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIV 356
Query: 466 MDKSTNIVKAIARLIMFYKHESCGQCTPCREGVSWMNKIIYRFVDGNASPKEIDMLWEIS 287
MD+ST+IVKAIARLI FYKHESCGQCTPCREGV WMNK++ RFV G+A P EID LWEIS
Sbjct: 357 MDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVRGDARPAEIDSLWEIS 416
Query: 286 KQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQEYSAAHGPSKA 149
KQIEGHTICALGDGAAWPVQGLIRHFRPELE RMQ ++ H +A
Sbjct: 417 KQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQRFAQQHQARQA 462
Score = 68.1 bits (159), Expect = 3e-11
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = -1
Query: 752 FASFGRQRNXGTKLFKISGHVNTPCTVEEEMSIPLQ 645
FA FGR+RN GTKLF ISGHVN PCTVEEEMS+PL+
Sbjct: 262 FAGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLK 297
>BC015645-1|AAH15645.1| 464|Homo sapiens NADH dehydrogenase
(ubiquinone) flavoprotein 1, 51kDa protein.
Length = 464
Score = 302 bits (742), Expect = 8e-82
Identities = 137/166 (82%), Positives = 149/166 (89%)
Frame = -2
Query: 646 KELIERHAGGVTGGWDNLLAIIPGGSSTPLIPKNVCETVLMDFDGLVAAQTSLGTAAIIV 467
KELIE+HAGGVTGGWDNLLA+IPGGSSTPLIPK+VCETVLMDFD LV AQT LGTAA+IV
Sbjct: 297 KELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIV 356
Query: 466 MDKSTNIVKAIARLIMFYKHESCGQCTPCREGVSWMNKIIYRFVDGNASPKEIDMLWEIS 287
MD+ST+IVKAIARLI FYKHESCGQCTPCREGV WMNK++ RFV G+A P EID LWEIS
Sbjct: 357 MDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVRGDARPAEIDSLWEIS 416
Query: 286 KQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQEYSAAHGPSKA 149
KQIEGHTICALGDGAAWPVQGLIRHFRPELE RMQ ++ H +A
Sbjct: 417 KQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQRFAQQHQARQA 462
Score = 68.1 bits (159), Expect = 3e-11
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = -1
Query: 752 FASFGRQRNXGTKLFKISGHVNTPCTVEEEMSIPLQ 645
FA FGR+RN GTKLF ISGHVN PCTVEEEMS+PL+
Sbjct: 262 FAGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLK 297
>BC008146-1|AAH08146.1| 455|Homo sapiens NDUFV1 protein protein.
Length = 455
Score = 302 bits (742), Expect = 8e-82
Identities = 137/166 (82%), Positives = 149/166 (89%)
Frame = -2
Query: 646 KELIERHAGGVTGGWDNLLAIIPGGSSTPLIPKNVCETVLMDFDGLVAAQTSLGTAAIIV 467
KELIE+HAGGVTGGWDNLLA+IPGGSSTPLIPK+VCETVLMDFD LV AQT LGTAA+IV
Sbjct: 288 KELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIV 347
Query: 466 MDKSTNIVKAIARLIMFYKHESCGQCTPCREGVSWMNKIIYRFVDGNASPKEIDMLWEIS 287
MD+ST+IVKAIARLI FYKHESCGQCTPCREGV WMNK++ RFV G+A P EID LWEIS
Sbjct: 348 MDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVRGDARPAEIDSLWEIS 407
Query: 286 KQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQEYSAAHGPSKA 149
KQIEGHTICALGDGAAWPVQGLIRHFRPELE RMQ ++ H +A
Sbjct: 408 KQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQRFAQQHQARQA 453
Score = 68.1 bits (159), Expect = 3e-11
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = -1
Query: 752 FASFGRQRNXGTKLFKISGHVNTPCTVEEEMSIPLQ 645
FA FGR+RN GTKLF ISGHVN PCTVEEEMS+PL+
Sbjct: 253 FAGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLK 288
>BC007619-1|AAH07619.1| 354|Homo sapiens Unknown (protein for
IMAGE:3355366) protein.
Length = 354
Score = 302 bits (742), Expect = 8e-82
Identities = 137/166 (82%), Positives = 149/166 (89%)
Frame = -2
Query: 646 KELIERHAGGVTGGWDNLLAIIPGGSSTPLIPKNVCETVLMDFDGLVAAQTSLGTAAIIV 467
KELIE+HAGGVTGGWDNLLA+IPGGSSTPLIPK+VCETVLMDFD LV AQT LGTAA+IV
Sbjct: 187 KELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIV 246
Query: 466 MDKSTNIVKAIARLIMFYKHESCGQCTPCREGVSWMNKIIYRFVDGNASPKEIDMLWEIS 287
MD+ST+IVKAIARLI FYKHESCGQCTPCREGV WMNK++ RFV G+A P EID LWEIS
Sbjct: 247 MDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVRGDARPAEIDSLWEIS 306
Query: 286 KQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQEYSAAHGPSKA 149
KQIEGHTICALGDGAAWPVQGLIRHFRPELE RMQ ++ H +A
Sbjct: 307 KQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQRFAQQHQARQA 352
Score = 68.1 bits (159), Expect = 3e-11
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = -1
Query: 752 FASFGRQRNXGTKLFKISGHVNTPCTVEEEMSIPLQ 645
FA FGR+RN GTKLF ISGHVN PCTVEEEMS+PL+
Sbjct: 152 FAGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLK 187
>AK223061-1|BAD96781.1| 464|Homo sapiens NADH dehydrogenase
(ubiquinone) flavoprotein 1, 51kDa variant protein.
Length = 464
Score = 302 bits (742), Expect = 8e-82
Identities = 137/166 (82%), Positives = 149/166 (89%)
Frame = -2
Query: 646 KELIERHAGGVTGGWDNLLAIIPGGSSTPLIPKNVCETVLMDFDGLVAAQTSLGTAAIIV 467
KELIE+HAGGVTGGWDNLLA+IPGGSSTPLIPK+VCETVLMDFD LV AQT LGTAA+IV
Sbjct: 297 KELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIV 356
Query: 466 MDKSTNIVKAIARLIMFYKHESCGQCTPCREGVSWMNKIIYRFVDGNASPKEIDMLWEIS 287
MD+ST+IVKAIARLI FYKHESCGQCTPCREGV WMNK++ RFV G+A P EID LWEIS
Sbjct: 357 MDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVRGDARPAEIDSLWEIS 416
Query: 286 KQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQEYSAAHGPSKA 149
KQIEGHTICALGDGAAWPVQGLIRHFRPELE RMQ ++ H +A
Sbjct: 417 KQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQRFAQQHQARQA 462
Score = 68.1 bits (159), Expect = 3e-11
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = -1
Query: 752 FASFGRQRNXGTKLFKISGHVNTPCTVEEEMSIPLQ 645
FA FGR+RN GTKLF ISGHVN PCTVEEEMS+PL+
Sbjct: 262 FAGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLK 297
>AF053070-1|AAC39722.1| 464|Homo sapiens NADH:ubiquinone
dehydrogenase 51 kDa subunit protein.
Length = 464
Score = 302 bits (742), Expect = 8e-82
Identities = 137/166 (82%), Positives = 149/166 (89%)
Frame = -2
Query: 646 KELIERHAGGVTGGWDNLLAIIPGGSSTPLIPKNVCETVLMDFDGLVAAQTSLGTAAIIV 467
KELIE+HAGGVTGGWDNLLA+IPGGSSTPLIPK+VCETVLMDFD LV AQT LGTAA+IV
Sbjct: 297 KELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIV 356
Query: 466 MDKSTNIVKAIARLIMFYKHESCGQCTPCREGVSWMNKIIYRFVDGNASPKEIDMLWEIS 287
MD+ST+IVKAIARLI FYKHESCGQCTPCREGV WMNK++ RFV G+A P EID LWEIS
Sbjct: 357 MDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVRGDARPAEIDSLWEIS 416
Query: 286 KQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQEYSAAHGPSKA 149
KQIEGHTICALGDGAAWPVQGLIRHFRPELE RMQ ++ H +A
Sbjct: 417 KQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQRFAQQHQARQA 462
Score = 68.1 bits (159), Expect = 3e-11
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = -1
Query: 752 FASFGRQRNXGTKLFKISGHVNTPCTVEEEMSIPLQ 645
FA FGR+RN GTKLF ISGHVN PCTVEEEMS+PL+
Sbjct: 262 FAGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLK 297
>AF053069-1|AAC39750.1| 464|Homo sapiens NADH:ubiquinone
dehydrogenase 51 kDa subunit protein.
Length = 464
Score = 302 bits (742), Expect = 8e-82
Identities = 137/166 (82%), Positives = 149/166 (89%)
Frame = -2
Query: 646 KELIERHAGGVTGGWDNLLAIIPGGSSTPLIPKNVCETVLMDFDGLVAAQTSLGTAAIIV 467
KELIE+HAGGVTGGWDNLLA+IPGGSSTPLIPK+VCETVLMDFD LV AQT LGTAA+IV
Sbjct: 297 KELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIV 356
Query: 466 MDKSTNIVKAIARLIMFYKHESCGQCTPCREGVSWMNKIIYRFVDGNASPKEIDMLWEIS 287
MD+ST+IVKAIARLI FYKHESCGQCTPCREGV WMNK++ RFV G+A P EID LWEIS
Sbjct: 357 MDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVRGDARPAEIDSLWEIS 416
Query: 286 KQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQEYSAAHGPSKA 149
KQIEGHTICALGDGAAWPVQGLIRHFRPELE RMQ ++ H +A
Sbjct: 417 KQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQRFAQQHQARQA 462
Score = 68.1 bits (159), Expect = 3e-11
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = -1
Query: 752 FASFGRQRNXGTKLFKISGHVNTPCTVEEEMSIPLQ 645
FA FGR+RN GTKLF ISGHVN PCTVEEEMS+PL+
Sbjct: 262 FAGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLK 297
>Y17379-1|CAA76757.1| 464|Homo sapiens NADH:ubiquinone
oxidoreductase 51-kD subunit protein.
Length = 464
Score = 295 bits (725), Expect = 9e-80
Identities = 135/166 (81%), Positives = 147/166 (88%)
Frame = -2
Query: 646 KELIERHAGGVTGGWDNLLAIIPGGSSTPLIPKNVCETVLMDFDGLVAAQTSLGTAAIIV 467
KELIE+HAG VTGGWD LLA+IPGGSSTPLIPK+VCETVLMDFD LV AQT LGTAA+IV
Sbjct: 297 KELIEKHAGFVTGGWDYLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIV 356
Query: 466 MDKSTNIVKAIARLIMFYKHESCGQCTPCREGVSWMNKIIYRFVDGNASPKEIDMLWEIS 287
MD+ST+IVKAIARLI FYKHESCGQCTPCREGV WMNK++ RFV G+A P EID LWEIS
Sbjct: 357 MDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVRGDARPAEIDSLWEIS 416
Query: 286 KQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQEYSAAHGPSKA 149
KQIEGHTICALGDGAAWPVQGLIRHFRPELE RMQ ++ H +A
Sbjct: 417 KQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQRFAQQHQARQA 462
Score = 68.1 bits (159), Expect = 3e-11
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = -1
Query: 752 FASFGRQRNXGTKLFKISGHVNTPCTVEEEMSIPLQ 645
FA FGR+RN GTKLF ISGHVN PCTVEEEMS+PL+
Sbjct: 262 FAGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLK 297
>S67973-1|AAB29698.2| 257|Homo sapiens NADH:ubiquinone
oxidoreductase flavoprotein 1 subunit protein.
Length = 257
Score = 68.1 bits (159), Expect = 3e-11
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = -1
Query: 752 FASFGRQRNXGTKLFKISGHVNTPCTVEEEMSIPLQ 645
FA FGR+RN GTKLF ISGHVN PCTVEEEMS+PL+
Sbjct: 176 FAGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLK 211
Score = 40.7 bits (91), Expect = 0.006
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -2
Query: 442 KAIARLIMFYKHESCGQCT 386
KAIARLI FYKH SCGQCT
Sbjct: 239 KAIARLIEFYKHASCGQCT 257
>AB115770-1|BAC98378.1| 747|Homo sapiens actin-bundling protein
with BAIAP2 homology protein.
Length = 747
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/33 (54%), Positives = 19/33 (57%)
Frame = -3
Query: 636 LRGTRAESPAXGTTCSPSYQEAPRPRSYPRTSA 538
LR T PA G T PS +EAPRPR P T A
Sbjct: 402 LRDTEP-GPASGGTLGPSGEEAPRPRMSPATIA 433
>BC105006-1|AAI05007.1| 312|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing A, isoform 2
protein.
Length = 312
Score = 31.1 bits (67), Expect = 4.7
Identities = 21/68 (30%), Positives = 27/68 (39%)
Frame = -1
Query: 626 RGRSHRRXGQPARHHTRRLLDPAHTQERLRDSVDGLRRSSSRADLPGHGGHHCHGQVN*H 447
R RS +R R R P + R RD RR SR+ PGH H H +
Sbjct: 242 RSRSPKRRSPSPRRERHRSKSPRRHRSRSRD-----RRHRSRSKSPGHHRSHRHRSHSKS 296
Query: 446 REGDRSTH 423
E + +H
Sbjct: 297 PERSKKSH 304
>BC105004-1|AAI05005.1| 312|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing A protein.
Length = 312
Score = 31.1 bits (67), Expect = 4.7
Identities = 21/68 (30%), Positives = 27/68 (39%)
Frame = -1
Query: 626 RGRSHRRXGQPARHHTRRLLDPAHTQERLRDSVDGLRRSSSRADLPGHGGHHCHGQVN*H 447
R RS +R R R P + R RD RR SR+ PGH H H +
Sbjct: 242 RSRSPKRRSPSPRRERHRSKSPRRHRSRSRD-----RRHRSRSKSPGHHRSHRHRSHSKS 296
Query: 446 REGDRSTH 423
E + +H
Sbjct: 297 PERSKKSH 304
>BC063655-1|AAH63655.1| 125|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing A protein.
Length = 125
Score = 31.1 bits (67), Expect = 4.7
Identities = 21/68 (30%), Positives = 27/68 (39%)
Frame = -1
Query: 626 RGRSHRRXGQPARHHTRRLLDPAHTQERLRDSVDGLRRSSSRADLPGHGGHHCHGQVN*H 447
R RS +R R R P + R RD RR SR+ PGH H H +
Sbjct: 55 RSRSPKRRSPSPRRERHRSKSPRRHRSRSRD-----RRHRSRSKSPGHHRSHRHRSHSKS 109
Query: 446 REGDRSTH 423
E + +H
Sbjct: 110 PERSKKSH 117
>BC000777-1|AAH00777.2| 125|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing A protein.
Length = 125
Score = 31.1 bits (67), Expect = 4.7
Identities = 21/68 (30%), Positives = 27/68 (39%)
Frame = -1
Query: 626 RGRSHRRXGQPARHHTRRLLDPAHTQERLRDSVDGLRRSSSRADLPGHGGHHCHGQVN*H 447
R RS +R R R P + R RD RR SR+ PGH H H +
Sbjct: 55 RSRSPKRRSPSPRRERHRSKSPRRHRSRSRD-----RRHRSRSKSPGHHRSHRHRSHSKS 109
Query: 446 REGDRSTH 423
E + +H
Sbjct: 110 PERSKKSH 117
>AL513218-9|CAI12289.1| 312|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing A protein.
Length = 312
Score = 31.1 bits (67), Expect = 4.7
Identities = 21/68 (30%), Positives = 27/68 (39%)
Frame = -1
Query: 626 RGRSHRRXGQPARHHTRRLLDPAHTQERLRDSVDGLRRSSSRADLPGHGGHHCHGQVN*H 447
R RS +R R R P + R RD RR SR+ PGH H H +
Sbjct: 242 RSRSPKRRSPSPRRERHRSKSPRRHRSRSRD-----RRHRSRSKSPGHHRSHRHRSHSKS 296
Query: 446 REGDRSTH 423
E + +H
Sbjct: 297 PERSKKSH 304
>AK092038-1|BAC03796.1| 312|Homo sapiens protein ( Homo sapiens
cDNA FLJ34719 fis, clone MESAN2005689, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 312
Score = 31.1 bits (67), Expect = 4.7
Identities = 21/68 (30%), Positives = 27/68 (39%)
Frame = -1
Query: 626 RGRSHRRXGQPARHHTRRLLDPAHTQERLRDSVDGLRRSSSRADLPGHGGHHCHGQVN*H 447
R RS +R R R P + R RD RR SR+ PGH H H +
Sbjct: 242 RSRSPKRRSPSPRRERHRSKSPRRHRSRSRD-----RRHRSRSKSPGHHRSHRHRSHSKS 296
Query: 446 REGDRSTH 423
E + +H
Sbjct: 297 PERSKKSH 304
>AK027842-1|BAB55405.1| 236|Homo sapiens protein ( Homo sapiens
cDNA FLJ14936 fis, clone PLACE1010194, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 236
Score = 31.1 bits (67), Expect = 4.7
Identities = 21/68 (30%), Positives = 27/68 (39%)
Frame = -1
Query: 626 RGRSHRRXGQPARHHTRRLLDPAHTQERLRDSVDGLRRSSSRADLPGHGGHHCHGQVN*H 447
R RS +R R R P + R RD RR SR+ PGH H H +
Sbjct: 166 RSRSPKRRSPSPRRERHRSKSPRRHRSRSRD-----RRHRSRSKSPGHHRSHRHRSHSKS 220
Query: 446 REGDRSTH 423
E + +H
Sbjct: 221 PERSKKSH 228
>AK096219-1|BAC04728.1| 131|Homo sapiens protein ( Homo sapiens
cDNA FLJ38900 fis, clone NT2NE2001021. ).
Length = 131
Score = 30.7 bits (66), Expect = 6.3
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = -1
Query: 569 LDPAHTQERLRDSVDGLRRSSSRADLPGHGGHHCHGQVN*HREGDRS---THHVLQARVL 399
++ A QER + D + S A P HH HGQ R+ R + VLQ R L
Sbjct: 27 VEEAELQERGQGGEDHEEQQPSPA--PEESDHHAHGQAGHQRDAGRGIVVSIEVLQERHL 84
Query: 398 RPV-HSLPRRCLLD 360
V H P + ++D
Sbjct: 85 HLVAHHAPGKAVVD 98
>AJ296168-1|CAC27563.1| 106|Homo sapiens keratin associated protein
protein.
Length = 106
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -3
Query: 231 CRDSYVTSGPSSSDACRSTRPRTGRAKPSACTSSAIR 121
C SY S C++TR RT +PS C S R
Sbjct: 61 CCPSYCVSSCCRPQCCQTTRCRTTCCRPSCCVSRCYR 97
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,604,045
Number of Sequences: 237096
Number of extensions: 2586626
Number of successful extensions: 8379
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 7439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8376
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -