Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_O01
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50109-8|CAA90435.1| 479|Caenorhabditis elegans Hypothetical pr... 290 7e-79
U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical pr... 30 1.6
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z70271-3|CAA94234.1| 358|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z19152-7|CAA79539.2| 643|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical... 29 3.8
AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical... 29 3.8
AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical ... 29 3.8
AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical... 29 3.8
AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical... 29 3.8
AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical ... 29 3.8
Z70752-3|CAA94755.3| 654|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z66497-8|CAA91285.2| 433|Caenorhabditis elegans Hypothetical pr... 28 6.6
AY204202-1|AAO39203.1| 339|Caenorhabditis elegans nuclear recep... 28 6.6
AY204201-1|AAO39202.1| 409|Caenorhabditis elegans nuclear recep... 28 6.6
AY204200-1|AAO39201.1| 304|Caenorhabditis elegans nuclear recep... 28 6.6
AJ745071-1|CAG32977.1| 433|Caenorhabditis elegans core alpha1,3... 28 6.6
AF408754-1|AAO27833.1| 418|Caenorhabditis elegans nuclear recep... 28 6.6
AC084155-11|AAQ91893.1| 304|Caenorhabditis elegans Nuclear horm... 28 6.6
AC084155-10|AAG23368.3| 418|Caenorhabditis elegans Nuclear horm... 28 6.6
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 28 8.8
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 28 8.8
U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical pr... 28 8.8
U00035-6|AAA50647.1| 315|Caenorhabditis elegans Hypothetical pr... 28 8.8
AM231686-1|CAJ77755.1| 315|Caenorhabditis elegans GDP-4-keto-6-... 28 8.8
>Z50109-8|CAA90435.1| 479|Caenorhabditis elegans Hypothetical
protein C09H10.3 protein.
Length = 479
Score = 290 bits (712), Expect = 7e-79
Identities = 127/157 (80%), Positives = 143/157 (91%)
Frame = -2
Query: 646 KELIERHAGGVTGGWDNLLAIIPGGSSTPLIPKNVCETVLMDFDGLVAAQTSLGTAAIIV 467
K+LIERH GGV GGWDNLLAIIPGGSS PL+PKNVC+TVLMDFD LVAAQ+ LGTAA+IV
Sbjct: 308 KDLIERHCGGVIGGWDNLLAIIPGGSSVPLMPKNVCDTVLMDFDALVAAQSGLGTAAVIV 367
Query: 466 MDKSTNIVKAIARLIMFYKHESCGQCTPCREGVSWMNKIIYRFVDGNASPKEIDMLWEIS 287
M+K T+IVK IARL +FYKHESCGQCTPCREG +W+NK+++RFVDG A P EIDM+WE+S
Sbjct: 368 MNKQTDIVKCIARLSLFYKHESCGQCTPCREGCNWLNKMMWRFVDGKAKPSEIDMMWELS 427
Query: 286 KQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQEY 176
KQIEGHTICALGD AAWPVQGLIRHFRPELERRM E+
Sbjct: 428 KQIEGHTICALGDAAAWPVQGLIRHFRPELERRMAEF 464
Score = 66.1 bits (154), Expect = 3e-11
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = -1
Query: 752 FASFGRQRNXGTKLFKISGHVNTPCTVEEEMSIPLQ 645
FASFGR+RN GTKLF ISG VN PCTVEEEMS+PL+
Sbjct: 273 FASFGRERNRGTKLFCISGQVNNPCTVEEEMSVPLK 308
>U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical
protein T13H2.5b protein.
Length = 1092
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 133 TSTGARLCSARARPSTPACVARARAGSD 216
T +R CS+ RPS+P+ V R R GSD
Sbjct: 19 TRRPSRPCSSYDRPSSPSVVIRERLGSD 46
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 133 TSTGARLCSARARPSTPACVARARAGSD 216
T +R CS+ RPS+P+ V R R GSD
Sbjct: 1398 TRRPSRPCSSYDRPSSPSVVIRERLGSD 1425
>Z70271-3|CAA94234.1| 358|Caenorhabditis elegans Hypothetical
protein W08D2.6 protein.
Length = 358
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -3
Query: 624 RAESPAXGTTCSPSYQEAPRPRSYP 550
RA PA G Y+EAP P SYP
Sbjct: 80 RARRPARGAYDEGDYKEAPPPTSYP 104
>Z19152-7|CAA79539.2| 643|Caenorhabditis elegans Hypothetical
protein B0464.6 protein.
Length = 643
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2
Query: 469 VMDKSTNIVKAIARLIMFYKHESCGQCTPCREGVSWMN 356
V+ +S N+ +AIA+ I F KHE+ G G S +N
Sbjct: 600 VLRQSPNLFRAIAQFIHFVKHENHGYLDQTSIGPSGIN 637
>AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6c protein.
Length = 1245
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 188 ASLELGPEVTYESLHRPRGSVAQSADRVPFDLFRNFPQHVDF 313
A + L P E LH+ +G + + + + DL R+ P+H F
Sbjct: 507 AEMALNPGYYRELLHKNQGVYSVALEEIERDLHRSLPEHPAF 548
>AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical
protein Y45F10A.6a protein.
Length = 1247
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 188 ASLELGPEVTYESLHRPRGSVAQSADRVPFDLFRNFPQHVDF 313
A + L P E LH+ +G + + + + DL R+ P+H F
Sbjct: 507 AEMALNPGYYRELLHKNQGVYSVALEEIERDLHRSLPEHPAF 548
>AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6b protein.
Length = 1245
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 188 ASLELGPEVTYESLHRPRGSVAQSADRVPFDLFRNFPQHVDF 313
A + L P E LH+ +G + + + + DL R+ P+H F
Sbjct: 507 AEMALNPGYYRELLHKNQGVYSVALEEIERDLHRSLPEHPAF 548
>AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6c protein.
Length = 1245
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 188 ASLELGPEVTYESLHRPRGSVAQSADRVPFDLFRNFPQHVDF 313
A + L P E LH+ +G + + + + DL R+ P+H F
Sbjct: 507 AEMALNPGYYRELLHKNQGVYSVALEEIERDLHRSLPEHPAF 548
>AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical
protein Y45F10A.6a protein.
Length = 1247
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 188 ASLELGPEVTYESLHRPRGSVAQSADRVPFDLFRNFPQHVDF 313
A + L P E LH+ +G + + + + DL R+ P+H F
Sbjct: 507 AEMALNPGYYRELLHKNQGVYSVALEEIERDLHRSLPEHPAF 548
>AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6b protein.
Length = 1245
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 188 ASLELGPEVTYESLHRPRGSVAQSADRVPFDLFRNFPQHVDF 313
A + L P E LH+ +G + + + + DL R+ P+H F
Sbjct: 507 AEMALNPGYYRELLHKNQGVYSVALEEIERDLHRSLPEHPAF 548
>Z70752-3|CAA94755.3| 654|Caenorhabditis elegans Hypothetical
protein F25B3.3 protein.
Length = 654
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = -3
Query: 312 KSTCCGKFRNKSKG--TRSALWATEPRGRCRDSYVTSGPSSSDACRSTRPRTGRAKPSAC 139
KS + R KS TR+A W PRG R + + RS+RPRT A ++
Sbjct: 535 KSNAVAECRRKSSSNLTRAAEWFASPRGSMRSRIINT------CKRSSRPRTVSAVVTSP 588
Query: 138 TS 133
T+
Sbjct: 589 TT 590
>Z66497-8|CAA91285.2| 433|Caenorhabditis elegans Hypothetical
protein K08F8.3 protein.
Length = 433
Score = 28.3 bits (60), Expect = 6.6
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +3
Query: 327 LPSTNLYIILFIQETPSRQGVHWPQ 401
+P N Y++ F QE+P+ G+ P+
Sbjct: 165 VPKPNQYVVYFSQESPANSGIQIPR 189
>AY204202-1|AAO39203.1| 339|Caenorhabditis elegans nuclear receptor
NHR-114 protein.
Length = 339
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 510 RPSKSINTVSQTFLGMSGVEEPPGMMASRLSXPPVTP 620
RP K + T S G PP + +LS PP++P
Sbjct: 100 RPKKELKTTSDCSSD-EGASTPPSVSPLQLSPPPISP 135
>AY204201-1|AAO39202.1| 409|Caenorhabditis elegans nuclear receptor
NHR-114 protein.
Length = 409
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 510 RPSKSINTVSQTFLGMSGVEEPPGMMASRLSXPPVTP 620
RP K + T S G PP + +LS PP++P
Sbjct: 91 RPKKELKTTSDCSSD-EGASTPPSVSPLQLSPPPISP 126
>AY204200-1|AAO39201.1| 304|Caenorhabditis elegans nuclear receptor
NHR-114 protein.
Length = 304
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 510 RPSKSINTVSQTFLGMSGVEEPPGMMASRLSXPPVTP 620
RP K + T S G PP + +LS PP++P
Sbjct: 100 RPKKELKTTSDCSSD-EGASTPPSVSPLQLSPPPISP 135
>AJ745071-1|CAG32977.1| 433|Caenorhabditis elegans core
alpha1,3-fucosyltransferase protein.
Length = 433
Score = 28.3 bits (60), Expect = 6.6
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +3
Query: 327 LPSTNLYIILFIQETPSRQGVHWPQ 401
+P N Y++ F QE+P+ G+ P+
Sbjct: 165 VPKPNQYVVYFSQESPANSGIQIPR 189
>AF408754-1|AAO27833.1| 418|Caenorhabditis elegans nuclear receptor
protein protein.
Length = 418
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 510 RPSKSINTVSQTFLGMSGVEEPPGMMASRLSXPPVTP 620
RP K + T S G PP + +LS PP++P
Sbjct: 100 RPKKELKTTSDCSSD-EGASTPPSVSPLQLSPPPISP 135
>AC084155-11|AAQ91893.1| 304|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 114, isoform b protein.
Length = 304
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 510 RPSKSINTVSQTFLGMSGVEEPPGMMASRLSXPPVTP 620
RP K + T S G PP + +LS PP++P
Sbjct: 100 RPKKELKTTSDCSSD-EGASTPPSVSPLQLSPPPISP 135
>AC084155-10|AAG23368.3| 418|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 114, isoform a protein.
Length = 418
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 510 RPSKSINTVSQTFLGMSGVEEPPGMMASRLSXPPVTP 620
RP K + T S G PP + +LS PP++P
Sbjct: 100 RPKKELKTTSDCSSD-EGASTPPSVSPLQLSPPPISP 135
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +2
Query: 581 YDGEQVVPX---AGDSARVPLNELLXAGCSSPPPRCTACSRDPIF*TASXXSYVGARTMR 751
Y+G+Q+ A +A VP+ L +P C+ C+R P+ +S Y
Sbjct: 1021 YEGKQISTVSCLASTTAVVPITTLPPITTPAPGDDCSGCNRLPVAILSSSSEYTNGLLKA 1080
Query: 752 TT 757
TT
Sbjct: 1081 TT 1082
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +2
Query: 581 YDGEQVVPX---AGDSARVPLNELLXAGCSSPPPRCTACSRDPIF*TASXXSYVGARTMR 751
Y+G+Q+ A +A VP+ L +P C+ C+R P+ +S Y
Sbjct: 1021 YEGKQISTVSCLASTTAVVPITTLPPITTPAPGDDCSGCNRLPVAILSSSSEYTNGLLKA 1080
Query: 752 TT 757
TT
Sbjct: 1081 TT 1082
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +2
Query: 581 YDGEQVVPX---AGDSARVPLNELLXAGCSSPPPRCTACSRDPIF*TASXXSYVGARTMR 751
Y+G+Q+ A +A VP+ L +P C+ C+R P+ +S Y
Sbjct: 1021 YEGKQISTVSCLASTTAVVPITTLPPITTPAPGDDCSGCNRLPVAILSSSSEYTNGLLKA 1080
Query: 752 TT 757
TT
Sbjct: 1081 TT 1082
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +2
Query: 581 YDGEQVVPX---AGDSARVPLNELLXAGCSSPPPRCTACSRDPIF*TASXXSYVGARTMR 751
Y+G+Q+ A +A VP+ L +P C+ C+R P+ +S Y
Sbjct: 1021 YEGKQISTVSCLASTTAVVPITTLPPITTPAPGDDCSGCNRLPVAILSSSSEYTNGLLKA 1080
Query: 752 TT 757
TT
Sbjct: 1081 TT 1082
>U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical
protein F42C5.4 protein.
Length = 712
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 575 SWYDGEQVVPXAGDSARVPLNELLXAGC 658
SWYD +++ P G V N+LL A C
Sbjct: 183 SWYDDKKMRPVFGCPFNVMANQLLCADC 210
>U00035-6|AAA50647.1| 315|Caenorhabditis elegans Hypothetical
protein R01H2.5 protein.
Length = 315
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 281 LFRNFPQHVDFFR*SITIDESVYNLVHPGDTFAARSALA 397
LF N ++ FFR ++ I+++V L H D S L+
Sbjct: 70 LFHNLAHNLQFFRKNMAINDNVLALCHEFDVIKCVSCLS 108
>AM231686-1|CAJ77755.1| 315|Caenorhabditis elegans
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4- reductase
protein.
Length = 315
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 281 LFRNFPQHVDFFR*SITIDESVYNLVHPGDTFAARSALA 397
LF N ++ FFR ++ I+++V L H D S L+
Sbjct: 70 LFHNLAHNLQFFRKNMAINDNVLALCHEFDVIKCVSCLS 108
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,905,144
Number of Sequences: 27780
Number of extensions: 393047
Number of successful extensions: 1412
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1411
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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