Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_O01
         (788 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    25   1.1  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    25   1.1  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    25   1.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   4.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   4.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   4.3  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   5.7  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   7.5  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   9.9  

>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 250 RPERRSCALRFVSKFPTACRFLSV 321
           +P +++C   ++SKFPT  + + V
Sbjct: 394 QPRKKNCCRSWLSKFPTRSKRIDV 417


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 250 RPERRSCALRFVSKFPTACRFLSV 321
           +P +++C   ++SKFPT  + + V
Sbjct: 394 QPRKKNCCRSWLSKFPTRSKRIDV 417


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 651 RDAHLLLHGARRVHVTRYFEQLRXXVTLAPE 743
           R  H  L   RR H+    E+L+  V L PE
Sbjct: 50  RTTHNELEKNRRAHLRNCLEKLKVLVPLGPE 80


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 224 THTSLPARARATHAGVLGRARAEQSRAP 141
           TH+ L    R+TH  V G  R   +R P
Sbjct: 377 THSQLCPTPRSTHLKVSGINRVGSTRRP 404


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 653  GCSSPPPRCTA 685
            GC+SPPP  T+
Sbjct: 1750 GCASPPPAATS 1760


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 653  GCSSPPPRCTA 685
            GC+SPPP  T+
Sbjct: 1746 GCASPPPAATS 1756


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = -1

Query: 488 GHGGHHCHGQVN*HREGDRSTHH 420
           GHG  H H   + H     + HH
Sbjct: 420 GHGHSHIHATPHHHHSHAATPHH 442


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 11/38 (28%), Positives = 14/38 (36%)
 Frame = -3

Query: 675 RGGGDEHPAXRSSLRGTRAESPAXGTTCSPSYQEAPRP 562
           R GG EHP       G   + P    +     Q+A  P
Sbjct: 14  RNGGVEHPHQHQQHYGAAVQVPQQTQSVQQQSQQAGDP 51


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 733 WRPNDANYLXATPTD 777
           WR N++NY    P D
Sbjct: 16  WRVNNSNYTELLPID 30


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,599
Number of Sequences: 438
Number of extensions: 4697
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)