Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_N24
         (860 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6JCT4 Cluster: NADH-ubiquinone oxidoreductase chain 2;...    40   0.081
UniRef50_Q1PUY4 Cluster: Putative uncharacterized protein; n=1; ...    36   1.00 
UniRef50_Q9G859 Cluster: Haem lyase; n=1; Malawimonas jakobiform...    35   2.3  
UniRef50_Q74MS4 Cluster: NEQ265; n=1; Nanoarchaeum equitans|Rep:...    34   5.3  

>UniRef50_Q6JCT4 Cluster: NADH-ubiquinone oxidoreductase chain 2;
           n=1; Aleurodicus dugesii|Rep: NADH-ubiquinone
           oxidoreductase chain 2 - Aleurodicus dugesii (Doogie
           Howzer whitefly)
          Length = 318

 Score = 39.9 bits (89), Expect = 0.081
 Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
 Frame = +1

Query: 121 LLYFLELLVFHTNIIYTIKHIL*HDLGVNSYSPRSTLHNHTKLLHIGWLFNSLNHPCPSI 300
           LLYF  L  ++ N+I+ I  I+   LG+N+   +  L  ++ + H+ W+  S+       
Sbjct: 124 LLYFYILKFYNLNLIFFISMIISSILGINNLLVQKML-GYSSINHMSWMMMSMMMSMKIF 182

Query: 301 FIIS*NYLQKILTLVYMLM--FNLL*WN 378
           ++   +YL  +L L+YM+M  FN   +N
Sbjct: 183 YLYFISYLFMML-LIYMMMNYFNFFYFN 209


>UniRef50_Q1PUY4 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Kuenenia stuttgartiensis|Rep: Putative
           uncharacterized protein - Candidatus Kuenenia
           stuttgartiensis
          Length = 51

 Score = 36.3 bits (80), Expect = 1.00
 Identities = 19/55 (34%), Positives = 32/55 (58%)
 Frame = +3

Query: 288 LPFNIYNLMKLFTKNTNISLHVNVQFAVMECFCSHSYYVKQKLGSYIMLLKFCSF 452
           +P+NI    K F  N ++ LH+ V +A+ME F S  + +KQ +    +L+  C+F
Sbjct: 1   MPYNI----KYFRGNVHVFLHIFVYYALMENFDSAVFLIKQPIALIEVLIVPCNF 51


>UniRef50_Q9G859 Cluster: Haem lyase; n=1; Malawimonas
           jakobiformis|Rep: Haem lyase - Malawimonas jakobiformis
          Length = 616

 Score = 35.1 bits (77), Expect = 2.3
 Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
 Frame = +1

Query: 118 FLLYFLELLVFHTN-IIYTIKHIL*HDLGVNSYSPRSTLHNHTKLLHIGWLFNSLNHPCP 294
           F+++F+   +F +N  IYT  + L +   +N     + L  H  L++IG++ +S+N    
Sbjct: 126 FIIFFIIYTIFTSNPFIYTYIYSL-NGSELNPILQDTVLAIHPPLIYIGYINSSINLSLV 184

Query: 295 SIFIIS*NYLQKILTLVYMLMFNLL*WNAFAHIPIML 405
           SI +I  NY  +IL   Y+ +  L+ W  F  I I+L
Sbjct: 185 SISLIEKNY-NEILK-KYLNISGLITW-IFLTIGILL 218


>UniRef50_Q74MS4 Cluster: NEQ265; n=1; Nanoarchaeum equitans|Rep:
            NEQ265 - Nanoarchaeum equitans
          Length = 2197

 Score = 33.9 bits (74), Expect = 5.3
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +3

Query: 309  LMKLFTKNTNISLHVNVQFAVMECFCSHSYYVKQKL 416
            L+++F    NISL +   +A+ + FC+ SY  K+K+
Sbjct: 1332 LIEIFGNEENISLSIKRWYAITDIFCNESYKTKEKV 1367


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,148,884
Number of Sequences: 1657284
Number of extensions: 11374779
Number of successful extensions: 20900
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20895
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)