Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_N24
         (860 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    25   0.77 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    25   0.77 
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    23   2.3  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   2.3  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   4.1  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   9.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   9.5  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +1

Query: 334 LTLVYMLMFNLL*WNAFAHIPIMLNKS*VLILCFSNFVHFVSYINHNHLREYLPVLKY 507
           LTL+Y L+  ++ +   AH   M   S  L L F ++  ++SYI   + R+   + KY
Sbjct: 55  LTLLYKLL-GIIQFPISAHFSFM---SRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKY 108


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +1

Query: 334 LTLVYMLMFNLL*WNAFAHIPIMLNKS*VLILCFSNFVHFVSYINHNHLREYLPVLKY 507
           LTL+Y L+  ++ +   AH   M   S  L L F ++  ++SYI   + R+   + KY
Sbjct: 11  LTLLYKLL-GIIQFPISAHFSFM---SRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKY 64


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 262 WLFNSLNHPCPS 297
           WLF  L HP PS
Sbjct: 196 WLFQHLTHPYPS 207


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 262 WLFNSLNHPCPS 297
           WLF  L HP PS
Sbjct: 352 WLFQHLTHPYPS 363


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = +1

Query: 466 NHNHLREYLPVLK 504
           N +++R+YLPVLK
Sbjct: 438 NGDYIRKYLPVLK 450


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +1

Query: 442 FVHFVSY--INHNHLREYLPVLKYENIR*STLDWTMV 546
           + H+++   + +  L EYL  L  E  R S   WT V
Sbjct: 198 YCHYLNILRVRYQLLNEYLETLVQETNRTSVEGWTDV 234


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +1

Query: 442 FVHFVSY--INHNHLREYLPVLKYENIR*STLDWTMV 546
           + H+++   + +  L EYL  L  E  R S   WT V
Sbjct: 198 YCHYLNILRVRYQLLNEYLETLVQETNRTSVEGWTDV 234


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,692
Number of Sequences: 336
Number of extensions: 3334
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)