Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_N24
         (860 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M74824-1|AAC14192.1|  644|Drosophila melanogaster D-E-A-D box pr...    29   8.2  
BT010045-1|AAQ22514.1|  687|Drosophila melanogaster LD27814p pro...    29   8.2  
AF132173-1|AAD34761.1|  687|Drosophila melanogaster unknown prot...    29   8.2  
AE014296-2792|AAF49419.1|  687|Drosophila melanogaster CG9680-PA...    29   8.2  

>M74824-1|AAC14192.1|  644|Drosophila melanogaster D-E-A-D box
           protein protein.
          Length = 644

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +2

Query: 68  IITNPGRLLKHNHATDNSYCI-SLNYL 145
           ++T PGRL+ H HAT   +C+ SL +L
Sbjct: 277 VVTTPGRLVDHLHAT-KGFCLKSLKFL 302


>BT010045-1|AAQ22514.1|  687|Drosophila melanogaster LD27814p
           protein.
          Length = 687

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +2

Query: 68  IITNPGRLLKHNHATDNSYCI-SLNYL 145
           ++T PGRL+ H HAT   +C+ SL +L
Sbjct: 277 VVTTPGRLVDHLHAT-KGFCLKSLKFL 302


>AF132173-1|AAD34761.1|  687|Drosophila melanogaster unknown
           protein.
          Length = 687

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +2

Query: 68  IITNPGRLLKHNHATDNSYCI-SLNYL 145
           ++T PGRL+ H HAT   +C+ SL +L
Sbjct: 277 VVTTPGRLVDHLHAT-KGFCLKSLKFL 302


>AE014296-2792|AAF49419.1|  687|Drosophila melanogaster CG9680-PA
           protein.
          Length = 687

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +2

Query: 68  IITNPGRLLKHNHATDNSYCI-SLNYL 145
           ++T PGRL+ H HAT   +C+ SL +L
Sbjct: 277 VVTTPGRLVDHLHAT-KGFCLKSLKFL 302


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,524,237
Number of Sequences: 53049
Number of extensions: 533959
Number of successful extensions: 933
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)