Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_N22
(805 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7TZ32 Cluster: Beta-tubulin; n=1; Lepeophtheirus salmo... 49 1e-04
UniRef50_Q9VAX7 Cluster: CG4869-PA; n=8; Eukaryota|Rep: CG4869-P... 39 0.17
UniRef50_P04350 Cluster: Tubulin beta-4 chain; n=4602; root|Rep:... 39 0.17
UniRef50_P52275 Cluster: Tubulin beta-2 chain; n=115; Bilateria|... 39 0.17
UniRef50_Q4P3J3 Cluster: Putative uncharacterized protein; n=1; ... 37 0.52
UniRef50_UPI00005A581E Cluster: PREDICTED: similar to tubulin, b... 34 4.8
UniRef50_A4HQN7 Cluster: Putative betatubulin; n=1; Nidula niveo... 33 6.4
UniRef50_Q5WIH2 Cluster: Putative uncharacterized protein; n=1; ... 33 8.4
UniRef50_Q3SD83 Cluster: Beta tubulin,putative; n=1; Paramecium ... 33 8.4
>UniRef50_A7TZ32 Cluster: Beta-tubulin; n=1; Lepeophtheirus
salmonis|Rep: Beta-tubulin - Lepeophtheirus salmonis
(salmon louse)
Length = 84
Score = 49.2 bits (112), Expect = 1e-04
Identities = 27/49 (55%), Positives = 31/49 (63%)
Frame = -3
Query: 746 KRIFGTVYPLCSGARLSCIGTPGEGHGXRWSSPEAESNMNDLVSEYQQY 600
+RI GT++ CS +LS GEG EAESNMNDLVSEYQQY
Sbjct: 17 RRISGTIHRPCSEEKLSLHWYTGEGMD-EMEFTEAESNMNDLVSEYQQY 64
>UniRef50_Q9VAX7 Cluster: CG4869-PA; n=8; Eukaryota|Rep: CG4869-PA -
Drosophila melanogaster (Fruit fly)
Length = 522
Score = 38.7 bits (86), Expect = 0.17
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -2
Query: 720 AMFRRKAFLHWYXRRGAWXEMEFT 649
AMFRRKAFLHWY G EMEFT
Sbjct: 452 AMFRRKAFLHWYTGEG-MDEMEFT 474
Score = 36.7 bits (81), Expect = 0.68
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDL+SEYQQY
Sbjct: 475 EAESNMNDLISEYQQY 490
>UniRef50_P04350 Cluster: Tubulin beta-4 chain; n=4602; root|Rep:
Tubulin beta-4 chain - Homo sapiens (Human)
Length = 444
Score = 38.7 bits (86), Expect = 0.17
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -2
Query: 720 AMFRRKAFLHWYXRRGAWXEMEFT 649
AMFRRKAFLHWY G EMEFT
Sbjct: 387 AMFRRKAFLHWYTGEG-MDEMEFT 409
Score = 37.1 bits (82), Expect = 0.52
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDLVSEYQQY
Sbjct: 410 EAESNMNDLVSEYQQY 425
>UniRef50_P52275 Cluster: Tubulin beta-2 chain; n=115;
Bilateria|Rep: Tubulin beta-2 chain - Caenorhabditis
elegans
Length = 450
Score = 38.7 bits (86), Expect = 0.17
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -2
Query: 720 AMFRRKAFLHWYXRRGAWXEMEFT 649
AMFRRKAFLHWY G EMEFT
Sbjct: 387 AMFRRKAFLHWYTGEG-MDEMEFT 409
Score = 36.7 bits (81), Expect = 0.68
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDL+SEYQQY
Sbjct: 410 EAESNMNDLISEYQQY 425
>UniRef50_Q4P3J3 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 291
Score = 37.1 bits (82), Expect = 0.52
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = -2
Query: 717 MFRRKAFLHWYXRRGAWXEMEFT 649
MFRRKAFLHWY G EMEFT
Sbjct: 204 MFRRKAFLHWYTGEG-MDEMEFT 225
>UniRef50_UPI00005A581E Cluster: PREDICTED: similar to tubulin, beta
3; n=2; Canis lupus familiaris|Rep: PREDICTED: similar
to tubulin, beta 3 - Canis familiaris
Length = 363
Score = 33.9 bits (74), Expect = 4.8
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = -2
Query: 753 AVQAHFRN---SLPAMFRRKAFLHWYXRRGAWXEMEFT 649
A+Q F+ + AMF+RK FLHWY G E EFT
Sbjct: 288 AIQELFKRISEQITAMFQRKTFLHWYMGEG-MDETEFT 324
>UniRef50_A4HQN7 Cluster: Putative betatubulin; n=1; Nidula
niveotomentosa|Rep: Putative betatubulin - Nidula
niveotomentosa
Length = 173
Score = 33.5 bits (73), Expect = 6.4
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = -2
Query: 774 TPPAIPXAVQAHFRNSLP---AMFRRKAFLHWYXRR 676
T P+ A+Q R +L AMF+R+AFLHWY R
Sbjct: 135 TAPSNSTAMQKENRGTLDSFSAMFKRRAFLHWYLGR 170
>UniRef50_Q5WIH2 Cluster: Putative uncharacterized protein; n=1;
Bacillus clausii KSM-K16|Rep: Putative uncharacterized
protein - Bacillus clausii (strain KSM-K16)
Length = 273
Score = 33.1 bits (72), Expect = 8.4
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 282 LFTAINIPELPFVVKEKHRECKHNLLPRHNVYFLGLF 392
LF + + LPF+ + H E KH+ P H V +G F
Sbjct: 88 LFAGLVLGILPFLWRSAHAETKHSFKPLHYVLMIGAF 124
>UniRef50_Q3SD83 Cluster: Beta tubulin,putative; n=1; Paramecium
tetraurelia|Rep: Beta tubulin,putative - Paramecium
tetraurelia
Length = 430
Score = 33.1 bits (72), Expect = 8.4
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMND +SEYQ Y
Sbjct: 395 EAESNMNDFISEYQDY 410
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,222,108
Number of Sequences: 1657284
Number of extensions: 12549428
Number of successful extensions: 32334
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 31157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32314
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69143070360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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