Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_N22
(805 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 40 0.003
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 39 0.004
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 39 0.004
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 39 0.004
03_01_0034 + 318432-318825,318902-319851 39 0.004
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 39 0.004
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 39 0.004
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 39 0.004
02_05_1127 + 34292894-34293284,34293948-34295443 30 1.9
08_02_1050 + 23949828-23949981,23950083-23950534,23951599-239516... 29 4.3
02_05_1137 - 34372803-34372869,34373088-34373229,34373334-343734... 28 7.6
11_06_0151 - 20643032-20643085,20643202-20643307,20643415-206434... 28 10.0
02_05_0841 + 32129863-32130294,32130395-32130459,32130565-321307... 28 10.0
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/38 (55%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -2
Query: 753 AVQAHFRN---SLPAMFRRKAFLHWYXRRGAWXEMEFT 649
++Q FR AMFRRKAFLHWY G EMEFT
Sbjct: 389 SIQEMFRRVSEQFTAMFRRKAFLHWYTSEG-MDEMEFT 425
Score = 35.9 bits (79), Expect = 0.038
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDLV+EYQQY
Sbjct: 426 EAESNMNDLVAEYQQY 441
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/38 (55%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -2
Query: 753 AVQAHFRN---SLPAMFRRKAFLHWYXRRGAWXEMEFT 649
++Q FR AMFRRKAFLHWY G EMEFT
Sbjct: 373 SIQEMFRRVSEQFTAMFRRKAFLHWYTGEG-MDEMEFT 409
Score = 35.9 bits (79), Expect = 0.038
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDLV+EYQQY
Sbjct: 410 EAESNMNDLVAEYQQY 425
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/38 (55%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -2
Query: 753 AVQAHFRN---SLPAMFRRKAFLHWYXRRGAWXEMEFT 649
++Q FR AMFRRKAFLHWY G EMEFT
Sbjct: 553 SIQEMFRRVSEQFTAMFRRKAFLHWYTGEG-MDEMEFT 589
Score = 37.1 bits (82), Expect = 0.016
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDLVSEYQQY
Sbjct: 590 EAESNMNDLVSEYQQY 605
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/38 (55%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -2
Query: 753 AVQAHFRN---SLPAMFRRKAFLHWYXRRGAWXEMEFT 649
++Q FR AMFRRKAFLHWY G EMEFT
Sbjct: 373 SIQEMFRRVSEQFTAMFRRKAFLHWYTGEG-MDEMEFT 409
Score = 35.9 bits (79), Expect = 0.038
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDLV+EYQQY
Sbjct: 410 EAESNMNDLVAEYQQY 425
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/38 (55%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -2
Query: 753 AVQAHFRN---SLPAMFRRKAFLHWYXRRGAWXEMEFT 649
++Q FR AMFRRKAFLHWY G EMEFT
Sbjct: 373 SIQEMFRRVSEQFTAMFRRKAFLHWYTGEG-MDEMEFT 409
Score = 37.1 bits (82), Expect = 0.016
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDLVSEYQQY
Sbjct: 410 EAESNMNDLVSEYQQY 425
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/38 (55%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -2
Query: 753 AVQAHFRN---SLPAMFRRKAFLHWYXRRGAWXEMEFT 649
++Q FR AMFRRKAFLHWY G EMEFT
Sbjct: 373 SIQEMFRRVSEQFTAMFRRKAFLHWYTGEG-MDEMEFT 409
Score = 35.9 bits (79), Expect = 0.038
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDLV+EYQQY
Sbjct: 410 EAESNMNDLVAEYQQY 425
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/38 (55%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -2
Query: 753 AVQAHFRN---SLPAMFRRKAFLHWYXRRGAWXEMEFT 649
++Q FR AMFRRKAFLHWY G EMEFT
Sbjct: 394 SIQEMFRRVSEQFTAMFRRKAFLHWYTGEG-MDEMEFT 430
Score = 37.1 bits (82), Expect = 0.016
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDLVSEYQQY
Sbjct: 431 EAESNMNDLVSEYQQY 446
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/38 (55%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -2
Query: 753 AVQAHFRN---SLPAMFRRKAFLHWYXRRGAWXEMEFT 649
++Q FR AMFRRKAFLHWY G EMEFT
Sbjct: 373 SIQEMFRRVSEQFTAMFRRKAFLHWYTGEG-MDEMEFT 409
Score = 37.1 bits (82), Expect = 0.016
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDLVSEYQQY
Sbjct: 410 EAESNMNDLVSEYQQY 425
>02_05_1127 + 34292894-34293284,34293948-34295443
Length = 628
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 563 RQTLRPRRRWPPGTVGTRRQGRS 631
R T +P+RRWPPG+ G +G S
Sbjct: 83 RATGQPKRRWPPGSSGGGARGGS 105
>08_02_1050 +
23949828-23949981,23950083-23950534,23951599-23951631,
23952069-23952179,23953175-23953348
Length = 307
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 545 SPAPAPRQTLRPRRRWPP 598
SP+P+P + P RRWPP
Sbjct: 27 SPSPSPLLSRAPSRRWPP 44
>02_05_1137 -
34372803-34372869,34373088-34373229,34373334-34373403,
34373521-34373823,34374215-34374280,34374425-34374490,
34374584-34374682,34376153-34376310,34376951-34377039,
34377209-34377591
Length = 480
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +2
Query: 551 APAPRQTLRPRRRWPPGTVGTRRQGRSCYS 640
+PA RQ L R+ PG G RRQGR C S
Sbjct: 19 SPAWRQELA--RQESPGVAGGRRQGRWCRS 46
>11_06_0151 - 20643032-20643085,20643202-20643307,20643415-20643495,
20643588-20643715,20643829-20643903,20644853-20645374,
20646622-20646687,20647990-20648076,20648173-20648247,
20648705-20648821,20648932-20649015,20649152-20649217,
20649352-20649417,20650079-20650150,20650231-20650332,
20650428-20650605,20650700-20650755,20653159-20653269,
20653354-20653422,20653558-20653741,20653826-20653914,
20654070-20654147,20654509-20654631,20654755-20654874,
20654975-20655055,20655285-20655431,20655533-20655611,
20657114-20657223,20659138-20659236,20659467-20659582,
20659673-20659781,20659839-20660069,20660152-20660417,
20661349-20661506,20661601-20661751,20661897-20661966,
20662203-20662232
Length = 1451
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 640 SASGELHLXPCPSPGVPMQESLAPEH 717
+A G+ L P P P Q S APEH
Sbjct: 1255 AAIGQKPLSPAPEPAAEQQPSPAPEH 1280
>02_05_0841 +
32129863-32130294,32130395-32130459,32130565-32130774,
32130943-32131024
Length = 262
Score = 27.9 bits (59), Expect = 10.0
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +2
Query: 551 APAPRQTLRPRRRWPPGTVGT-RRQGRSCYSQPRVNSISXHAPR 679
A + T R + P VGT RR G SCY Q R + PR
Sbjct: 46 AASAASTRRRKALLPTAVVGTTRRDGGSCYLQLRSRMLFMAPPR 89
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,839,098
Number of Sequences: 37544
Number of extensions: 360238
Number of successful extensions: 979
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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