BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_N22
(805 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X16826-1|CAA34726.1| 435|Drosophila melanogaster 60C beta tubul... 39 0.009
M22335-1|AAA28993.1| 454|Drosophila melanogaster protein ( D.me... 39 0.009
M20420-1|AAA28991.1| 446|Drosophila melanogaster protein ( D.me... 39 0.009
M20419-1|AAA28989.1| 447|Drosophila melanogaster protein ( D.me... 39 0.009
BT015991-1|AAV36876.1| 454|Drosophila melanogaster RE53159p pro... 39 0.009
BT003242-1|AAO24999.1| 447|Drosophila melanogaster LD43681p pro... 39 0.009
AY118725-1|AAM50585.1| 446|Drosophila melanogaster GH02051p pro... 39 0.009
AY118611-1|AAM49980.1| 457|Drosophila melanogaster LP10436p pro... 39 0.009
AE014297-4213|AAF56770.2| 522|Drosophila melanogaster CG4869-PA... 39 0.009
AE014297-930|AAF54373.1| 446|Drosophila melanogaster CG9359-PA ... 39 0.009
AE013599-3851|AAF47193.2| 454|Drosophila melanogaster CG3401-PA... 39 0.009
AE013599-2894|AAN16132.2| 375|Drosophila melanogaster CG9277-PD... 39 0.009
AE013599-2893|AAN16133.1| 375|Drosophila melanogaster CG9277-PC... 39 0.009
AE013599-2892|AAF57556.1| 456|Drosophila melanogaster CG9277-PA... 39 0.009
AE013599-2891|AAF57555.1| 447|Drosophila melanogaster CG9277-PB... 39 0.009
AY089468-1|AAL90206.1| 462|Drosophila melanogaster AT27896p pro... 30 3.2
AE014296-1121|AAF50659.1| 462|Drosophila melanogaster CG32396-P... 30 3.2
AE014298-1753|AAF48147.2| 1860|Drosophila melanogaster CG2750-PA... 30 4.3
M14646-1|AAA28988.1| 462|Drosophila melanogaster protein ( D.me... 29 5.6
AE014296-1707|AAF50226.2| 462|Drosophila melanogaster CG8308-PA... 29 5.6
>X16826-1|CAA34726.1| 435|Drosophila melanogaster 60C beta tubulin
protein.
Length = 435
Score = 38.7 bits (86), Expect = 0.009
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -2
Query: 720 AMFRRKAFLHWYXRRGAWXEMEFT 649
AMFRRKAFLHWY G EMEFT
Sbjct: 374 AMFRRKAFLHWYTGEG-MDEMEFT 396
Score = 37.1 bits (82), Expect = 0.028
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDLVSEYQQY
Sbjct: 397 EAESNMNDLVSEYQQY 412
>M22335-1|AAA28993.1| 454|Drosophila melanogaster protein (
D.melanogaster beta-3 tubulin gene, exons 2, 3 and 4. ).
Length = 454
Score = 38.7 bits (86), Expect = 0.009
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -2
Query: 720 AMFRRKAFLHWYXRRGAWXEMEFT 649
AMFRRKAFLHWY G EMEFT
Sbjct: 393 AMFRRKAFLHWYTGEG-MDEMEFT 415
Score = 37.1 bits (82), Expect = 0.028
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDLVSEYQQY
Sbjct: 416 EAESNMNDLVSEYQQY 431
>M20420-1|AAA28991.1| 446|Drosophila melanogaster protein (
D.melanogaster beta-2 tubulin mRNA, complete cds. ).
Length = 446
Score = 38.7 bits (86), Expect = 0.009
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -2
Query: 720 AMFRRKAFLHWYXRRGAWXEMEFT 649
AMFRRKAFLHWY G EMEFT
Sbjct: 387 AMFRRKAFLHWYTGEG-MDEMEFT 409
Score = 37.1 bits (82), Expect = 0.028
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDLVSEYQQY
Sbjct: 410 EAESNMNDLVSEYQQY 425
>M20419-1|AAA28989.1| 447|Drosophila melanogaster protein (
D.melanogaster beta-1 tubulin mRNA, complete cds. ).
Length = 447
Score = 38.7 bits (86), Expect = 0.009
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -2
Query: 720 AMFRRKAFLHWYXRRGAWXEMEFT 649
AMFRRKAFLHWY G EMEFT
Sbjct: 387 AMFRRKAFLHWYTGEG-MDEMEFT 409
Score = 37.1 bits (82), Expect = 0.028
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDLVSEYQQY
Sbjct: 410 EAESNMNDLVSEYQQY 425
>BT015991-1|AAV36876.1| 454|Drosophila melanogaster RE53159p
protein.
Length = 454
Score = 38.7 bits (86), Expect = 0.009
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -2
Query: 720 AMFRRKAFLHWYXRRGAWXEMEFT 649
AMFRRKAFLHWY G EMEFT
Sbjct: 393 AMFRRKAFLHWYTGEG-MDEMEFT 415
Score = 37.1 bits (82), Expect = 0.028
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDLVSEYQQY
Sbjct: 416 EAESNMNDLVSEYQQY 431
>BT003242-1|AAO24999.1| 447|Drosophila melanogaster LD43681p
protein.
Length = 447
Score = 38.7 bits (86), Expect = 0.009
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -2
Query: 720 AMFRRKAFLHWYXRRGAWXEMEFT 649
AMFRRKAFLHWY G EMEFT
Sbjct: 387 AMFRRKAFLHWYTGEG-MDEMEFT 409
Score = 37.1 bits (82), Expect = 0.028
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDLVSEYQQY
Sbjct: 410 EAESNMNDLVSEYQQY 425
>AY118725-1|AAM50585.1| 446|Drosophila melanogaster GH02051p
protein.
Length = 446
Score = 38.7 bits (86), Expect = 0.009
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -2
Query: 720 AMFRRKAFLHWYXRRGAWXEMEFT 649
AMFRRKAFLHWY G EMEFT
Sbjct: 387 AMFRRKAFLHWYTGEG-MDEMEFT 409
Score = 37.1 bits (82), Expect = 0.028
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDLVSEYQQY
Sbjct: 410 EAESNMNDLVSEYQQY 425
>AY118611-1|AAM49980.1| 457|Drosophila melanogaster LP10436p
protein.
Length = 457
Score = 38.7 bits (86), Expect = 0.009
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -2
Query: 720 AMFRRKAFLHWYXRRGAWXEMEFT 649
AMFRRKAFLHWY G EMEFT
Sbjct: 387 AMFRRKAFLHWYTGEG-MDEMEFT 409
Score = 36.7 bits (81), Expect = 0.037
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDL+SEYQQY
Sbjct: 410 EAESNMNDLISEYQQY 425
>AE014297-4213|AAF56770.2| 522|Drosophila melanogaster CG4869-PA
protein.
Length = 522
Score = 38.7 bits (86), Expect = 0.009
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -2
Query: 720 AMFRRKAFLHWYXRRGAWXEMEFT 649
AMFRRKAFLHWY G EMEFT
Sbjct: 452 AMFRRKAFLHWYTGEG-MDEMEFT 474
Score = 36.7 bits (81), Expect = 0.037
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDL+SEYQQY
Sbjct: 475 EAESNMNDLISEYQQY 490
>AE014297-930|AAF54373.1| 446|Drosophila melanogaster CG9359-PA
protein.
Length = 446
Score = 38.7 bits (86), Expect = 0.009
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -2
Query: 720 AMFRRKAFLHWYXRRGAWXEMEFT 649
AMFRRKAFLHWY G EMEFT
Sbjct: 387 AMFRRKAFLHWYTGEG-MDEMEFT 409
Score = 37.1 bits (82), Expect = 0.028
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDLVSEYQQY
Sbjct: 410 EAESNMNDLVSEYQQY 425
>AE013599-3851|AAF47193.2| 454|Drosophila melanogaster CG3401-PA
protein.
Length = 454
Score = 38.7 bits (86), Expect = 0.009
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -2
Query: 720 AMFRRKAFLHWYXRRGAWXEMEFT 649
AMFRRKAFLHWY G EMEFT
Sbjct: 393 AMFRRKAFLHWYTGEG-MDEMEFT 415
Score = 37.1 bits (82), Expect = 0.028
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDLVSEYQQY
Sbjct: 416 EAESNMNDLVSEYQQY 431
>AE013599-2894|AAN16132.2| 375|Drosophila melanogaster CG9277-PD,
isoform D protein.
Length = 375
Score = 38.7 bits (86), Expect = 0.009
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -2
Query: 720 AMFRRKAFLHWYXRRGAWXEMEFT 649
AMFRRKAFLHWY G EMEFT
Sbjct: 315 AMFRRKAFLHWYTGEG-MDEMEFT 337
Score = 37.1 bits (82), Expect = 0.028
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDLVSEYQQY
Sbjct: 338 EAESNMNDLVSEYQQY 353
>AE013599-2893|AAN16133.1| 375|Drosophila melanogaster CG9277-PC,
isoform C protein.
Length = 375
Score = 38.7 bits (86), Expect = 0.009
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -2
Query: 720 AMFRRKAFLHWYXRRGAWXEMEFT 649
AMFRRKAFLHWY G EMEFT
Sbjct: 315 AMFRRKAFLHWYTGEG-MDEMEFT 337
Score = 37.1 bits (82), Expect = 0.028
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDLVSEYQQY
Sbjct: 338 EAESNMNDLVSEYQQY 353
>AE013599-2892|AAF57556.1| 456|Drosophila melanogaster CG9277-PA,
isoform A protein.
Length = 456
Score = 38.7 bits (86), Expect = 0.009
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -2
Query: 720 AMFRRKAFLHWYXRRGAWXEMEFT 649
AMFRRKAFLHWY G EMEFT
Sbjct: 396 AMFRRKAFLHWYTGEG-MDEMEFT 418
Score = 37.1 bits (82), Expect = 0.028
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDLVSEYQQY
Sbjct: 419 EAESNMNDLVSEYQQY 434
>AE013599-2891|AAF57555.1| 447|Drosophila melanogaster CG9277-PB,
isoform B protein.
Length = 447
Score = 38.7 bits (86), Expect = 0.009
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -2
Query: 720 AMFRRKAFLHWYXRRGAWXEMEFT 649
AMFRRKAFLHWY G EMEFT
Sbjct: 387 AMFRRKAFLHWYTGEG-MDEMEFT 409
Score = 37.1 bits (82), Expect = 0.028
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDLVSEYQQY
Sbjct: 410 EAESNMNDLVSEYQQY 425
>AY089468-1|AAL90206.1| 462|Drosophila melanogaster AT27896p
protein.
Length = 462
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = -2
Query: 753 AVQAHFRNSLPA---MFRRKAFLHWYXRRGAWXEMEF 652
A+Q F+ L A M RRKA LHWY G E EF
Sbjct: 372 AIQTLFQRLLDASMSMLRRKAHLHWYTGEG-MEEQEF 407
>AE014296-1121|AAF50659.1| 462|Drosophila melanogaster CG32396-PA
protein.
Length = 462
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = -2
Query: 753 AVQAHFRNSLPA---MFRRKAFLHWYXRRGAWXEMEF 652
A+Q F+ L A M RRKA LHWY G E EF
Sbjct: 372 AIQTLFQRLLDASMSMLRRKAHLHWYTGEG-MEEQEF 407
>AE014298-1753|AAF48147.2| 1860|Drosophila melanogaster CG2750-PA
protein.
Length = 1860
Score = 29.9 bits (64), Expect = 4.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 304 QSCPS*SRKNTGNVNTTCYRDITCTS*G 387
+ CP+ ++NT NV T C D+T S G
Sbjct: 1280 RKCPTPPKRNTPNVTTECLNDMTMPSFG 1307
>M14646-1|AAA28988.1| 462|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-4), complete
cds. ).
Length = 462
Score = 29.5 bits (63), Expect = 5.6
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 717 MFRRKAFLHWYXRRGAWXEMEFTRG*E 637
MF+++AF+HWY G E EFT E
Sbjct: 409 MFKKRAFVHWYVGEG-MEEGEFTEARE 434
>AE014296-1707|AAF50226.2| 462|Drosophila melanogaster CG8308-PA
protein.
Length = 462
Score = 29.5 bits (63), Expect = 5.6
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 717 MFRRKAFLHWYXRRGAWXEMEFTRG*E 637
MF+++AF+HWY G E EFT E
Sbjct: 409 MFKKRAFVHWYVGEG-MEEGEFTEARE 434
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,032,423
Number of Sequences: 53049
Number of extensions: 599252
Number of successful extensions: 1497
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1497
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -