Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_N22
(805 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 39 0.005
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 39 0.005
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 39 0.005
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 39 0.005
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 39 0.005
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 39 0.005
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 30 2.2
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 30 2.2
Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 28 9.0
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -2
Query: 720 AMFRRKAFLHWYXRRGAWXEMEFT 649
AMFRRKAFLHWY G EMEFT
Sbjct: 387 AMFRRKAFLHWYTGEG-MDEMEFT 409
Score = 36.7 bits (81), Expect = 0.019
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDL+SEYQQY
Sbjct: 410 EAESNMNDLISEYQQY 425
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -2
Query: 720 AMFRRKAFLHWYXRRGAWXEMEFT 649
AMFRRKAFLHWY G EMEFT
Sbjct: 387 AMFRRKAFLHWYTGEG-MDEMEFT 409
Score = 37.1 bits (82), Expect = 0.015
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDLVSEYQQY
Sbjct: 410 EAESNMNDLVSEYQQY 425
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -2
Query: 720 AMFRRKAFLHWYXRRGAWXEMEFT 649
AMFRRKAFLHWY G EMEFT
Sbjct: 387 AMFRRKAFLHWYTGEG-MDEMEFT 409
Score = 37.1 bits (82), Expect = 0.015
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDLVSEYQQY
Sbjct: 410 EAESNMNDLVSEYQQY 425
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -2
Query: 720 AMFRRKAFLHWYXRRGAWXEMEFT 649
AMFRRKAFLHWY G EMEFT
Sbjct: 387 AMFRRKAFLHWYTGEG-MDEMEFT 409
Score = 36.7 bits (81), Expect = 0.019
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDL+SEYQQY
Sbjct: 410 EAESNMNDLISEYQQY 425
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -2
Query: 720 AMFRRKAFLHWYXRRGAWXEMEFT 649
AMFRRKAFLHWY G EMEFT
Sbjct: 387 AMFRRKAFLHWYTGEG-MDEMEFT 409
Score = 37.1 bits (82), Expect = 0.015
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDLVSEYQQY
Sbjct: 410 EAESNMNDLVSEYQQY 425
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -2
Query: 720 AMFRRKAFLHWYXRRGAWXEMEFT 649
AMFRRKAFLHWY G EMEFT
Sbjct: 387 AMFRRKAFLHWYTGEG-MDEMEFT 409
Score = 37.1 bits (82), Expect = 0.015
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
EAESNMNDLVSEYQQY
Sbjct: 410 EAESNMNDLVSEYQQY 425
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -2
Query: 717 MFRRKAFLHWYXRRGAWXEMEFT 649
+FRRKAFLHWY E EFT
Sbjct: 386 LFRRKAFLHWY----TMEESEFT 404
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
+AE+ +NDL+SE+QQY
Sbjct: 405 DAENKVNDLISEFQQY 420
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -2
Query: 717 MFRRKAFLHWYXRRGAWXEMEFT 649
+FRRKAFLHWY E EFT
Sbjct: 386 LFRRKAFLHWY----TMEESEFT 404
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = -3
Query: 647 EAESNMNDLVSEYQQY 600
+AE+ +NDL+SE+QQY
Sbjct: 405 DAENKVNDLISEFQQY 420
>Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical
protein F40F12.5 protein.
Length = 1144
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 545 SPAPAPRQTLRPRRRWPPGTVGTRRQGRSCY-SQPRVNSISXHAPR 679
+P PAPR+ + P R P +R RS S+P N+ S H PR
Sbjct: 362 APKPAPRERIIPVSRQQPEI--EQRNSRSMKPSEPDYNTYSTHPPR 405
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 174 YLRCNFSPSFCNQCDELLAFSNE 106
YLRC++ S QC E FSN+
Sbjct: 1126 YLRCSYGASKLQQCSEDRVFSND 1148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,717,337
Number of Sequences: 27780
Number of extensions: 299014
Number of successful extensions: 679
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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