Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_N19
         (775 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0522 - 4506667-4507254,4507474-4507824,4507967-4508163,450...    30   2.3  
06_03_0891 + 25708864-25709596,25709629-25709729,25710047-257102...    29   3.1  
11_05_0104 + 19091507-19092091,19092669-19092752,19094597-19094746     29   4.1  
08_01_0845 + 8290891-8291017,8291708-8291777,8292139-8293084           29   5.4  
04_04_0301 + 24251287-24251425,24252180-24252249,24252610-24253555     29   5.4  
04_04_0271 + 24069218-24069433,24069695-24070365,24070458-24073410     29   5.4  
10_06_0030 - 9834515-9834608,9834784-9835277                           28   7.2  
01_07_0108 - 41126074-41127342                                         28   7.2  

>05_01_0522 -
           4506667-4507254,4507474-4507824,4507967-4508163,
           4508324-4508582,4508656-4508868,4508946-4509071,
           4509159-4509296,4509376-4509721,4509822-4510088,
           4510427-4510616,4510700-4510784,4510885-4511072,
           4511262-4511457,4512027-4512113
          Length = 1076

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
 Frame = -2

Query: 702 CPNNNPKQEATQEXFDRYPLYVSETREDRFLIPLDTAKKEVFRYRVRLPPYVTCTQCVPQ 523
           C  +N +  A +  F +   Y+ +  +  F+      K+E   ++VR+   V   Q VP+
Sbjct: 416 CKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKVPE 475

Query: 522 --WTYYTGNMW 496
             WT   G  W
Sbjct: 476 EGWTMADGTAW 486


>06_03_0891 +
           25708864-25709596,25709629-25709729,25710047-25710259,
           25710328-25710969
          Length = 562

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 18/65 (27%), Positives = 34/65 (52%)
 Frame = -1

Query: 628 QRRQVPDTFGHGEERGIQVQSAAAALCNLHAMCSTVDLLYWQHVGDLPQRHGGGRLRQVG 449
           +RR+ P    HG+  G+++      L  + ++   V  +  + + DL +RHG   L ++G
Sbjct: 25  RRRRSPPPAAHGDG-GLRLPPGPWTLPIIGSLHHLVGQIPHRAMRDLARRHGPVMLLRIG 83

Query: 448 DVPQL 434
           +VP L
Sbjct: 84  EVPTL 88


>11_05_0104 + 19091507-19092091,19092669-19092752,19094597-19094746
          Length = 272

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 180 EGKSRELRGSWEGTGDSWSG 239
           EG + +LRG++E  G+ WSG
Sbjct: 102 EGIAEQLRGAYENLGEEWSG 121


>08_01_0845 + 8290891-8291017,8291708-8291777,8292139-8293084
          Length = 380

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = -2

Query: 702 CPNNNPKQEATQEXFDRYPLYVSETREDRFLIPLDTAKKEVFRYRVRLPPYV 547
           CP  + K    Q   DR    +   R +R L+P+ TA +   R R+  P ++
Sbjct: 38  CPAASDKISRRQISLDRTVNGIFVVRRERTLLPIPTAFRSTVRVRLTSPAFL 89


>04_04_0301 + 24251287-24251425,24252180-24252249,24252610-24253555
          Length = 384

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = -2

Query: 702 CPNNNPKQEATQEXFDRYPLYVSETREDRFLIPLDTAKKEVFRYRVRLPPYV 547
           CP  + K+   Q   DR    +   R  R L+P+ TA +   R R+  P ++
Sbjct: 42  CPAASDKRGRRQISLDRTVNGIFVVRHKRILLPIPTAFRSTTRVRLTSPAFL 93


>04_04_0271 + 24069218-24069433,24069695-24070365,24070458-24073410
          Length = 1279

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
 Frame = -1

Query: 679  RSDSGVXRQISPLRFGNQRRQVPDTFGHGEERGIQVQSA-AAALCNLHAMCSTVDLLYWQ 503
            RS   +  Q   L  G  R  +   +G  EE   + + A AAAL N H   S ++  Y  
Sbjct: 1103 RSQVALVSQEPTLFSGTIRDNI--AYGAAEEHATEDEVARAAALANAHGFISAMERGYDT 1160

Query: 502  HVGDLPQRHGGGRLRQV 452
             VG+   +  GG+ +++
Sbjct: 1161 RVGERGAQLSGGQRQRI 1177


>10_06_0030 - 9834515-9834608,9834784-9835277
          Length = 195

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = +3

Query: 180 EGKSRELRGSWEGTGDSWSGTSSACRAGCGTRKTERKLGLLQQAGRWTW 326
           +GK   L G W   G++W        AG G       +  ++  GRW+W
Sbjct: 103 DGKLPRLEGEWRQRGETW-WHGGEVNAGDGDVDFSTDVVGIRVWGRWSW 150


>01_07_0108 - 41126074-41127342
          Length = 422

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +2

Query: 365 SLRRSPAKAGGRPPVLVITLTSAQLRNVSDLPQPTASVPL-GQIPHMLP 508
           +LRRSP  AGG      IT  S ++ N   +P P    PL  Q+  M+P
Sbjct: 234 ALRRSPELAGGNGGGYYITAKSIEV-NHHQVPLPNHGAPLVVQLSSMVP 281


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,971,133
Number of Sequences: 37544
Number of extensions: 476720
Number of successful extensions: 1539
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1539
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)