Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_N19
         (775 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ296168-1|CAC27563.1|  106|Homo sapiens keratin associated prot...    35   0.28 
BC126423-1|AAI26424.1|  210|Homo sapiens keratin associated prot...    31   4.6  
BC126421-1|AAI26422.1|  210|Homo sapiens keratin associated prot...    31   4.6  
AJ406939-1|CAC27578.1|  210|Homo sapiens keratin associated prot...    31   4.6  
AJ406941-1|CAC27580.1|  191|Homo sapiens keratin associated prot...    30   8.0  

>AJ296168-1|CAC27563.1|  106|Homo sapiens keratin associated protein
           protein.
          Length = 106

 Score = 35.1 bits (77), Expect = 0.28
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
 Frame = -2

Query: 246 SWCQTNCLRYP---PNCPEALCSCPQVCEAVGEYEGREGADVYCMDLCIVYPPKCPTDKC 76
           S+CQT C R     P+C    C  PQ C++V   +       YC+  C   P  C T +C
Sbjct: 24  SYCQTTCCRTTCCRPSCCRPSCCRPQCCQSVC-CQPTCCCPSYCVSSC-CRPQCCQTTRC 81

Query: 75  R 73
           R
Sbjct: 82  R 82


>BC126423-1|AAI26424.1|  210|Homo sapiens keratin associated protein
           4-7 protein.
          Length = 210

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
 Frame = -2

Query: 246 SWCQTNCLR---YPPNCPEALCSCPQVCEAV 163
           S CQT C R   Y P+C  + C  PQ C++V
Sbjct: 28  SCCQTTCCRTTCYRPSCCVSSCCRPQCCQSV 58


>BC126421-1|AAI26422.1|  210|Homo sapiens keratin associated protein
           4-7 protein.
          Length = 210

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
 Frame = -2

Query: 246 SWCQTNCLR---YPPNCPEALCSCPQVCEAV 163
           S CQT C R   Y P+C  + C  PQ C++V
Sbjct: 28  SCCQTTCCRTTCYRPSCCVSSCCRPQCCQSV 58


>AJ406939-1|CAC27578.1|  210|Homo sapiens keratin associated protein
           4.7 protein.
          Length = 210

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
 Frame = -2

Query: 246 SWCQTNCLR---YPPNCPEALCSCPQVCEAV 163
           S CQT C R   Y P+C  + C  PQ C++V
Sbjct: 28  SCCQTTCCRTTCYRPSCCVSSCCRPQCCQSV 58


>AJ406941-1|CAC27580.1|  191|Homo sapiens keratin associated protein
           4.9 protein.
          Length = 191

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = -2

Query: 246 SWCQTNCLR---YPPNCPEALCSCPQVCEAV 163
           S CQT C R   Y P+C  + C  PQ C+ V
Sbjct: 49  SCCQTTCCRTTCYRPSCCVSSCCRPQCCQPV 79


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,852,423
Number of Sequences: 237096
Number of extensions: 2515646
Number of successful extensions: 6711
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6711
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)