Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_N19
         (775 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g25980.1 68415.m03120 jacalin lectin family protein similar t...    29   2.6  
At1g32190.1 68414.m03959 expressed protein                             29   2.6  
At1g51490.1 68414.m05795 glycosyl hydrolase family 1 protein con...    29   4.5  
At5g24620.1 68418.m02908 thaumatin-like protein, putative simila...    28   6.0  
At4g03940.1 68417.m00557 expressed protein                             28   6.0  
At5g64750.1 68418.m08142 AP2 domain-containing transcription fac...    28   7.9  
At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit, ...    28   7.9  
At3g12500.1 68416.m01556 basic endochitinase identical to basic ...    28   7.9  
At2g47450.1 68415.m05922 chloroplast signal recognition particle...    28   7.9  
At2g25540.1 68415.m03057 cellulose synthase, catalytic subunit, ...    28   7.9  

>At2g25980.1 68415.m03120 jacalin lectin family protein similar to
           myrosinase-binding protein homolog [Arabidopsis
           thaliana] GI:2997767; contains Pfam profile PF01419
           jacalin-like lectin domain
          Length = 449

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
 Frame = -1

Query: 670 SGVXRQISPLRFGNQRRQVPDTFGHGEERGIQVQSAAAALCNLHAMCS-TVDLLYWQHVG 494
           SG   ++  L F   + +   T+G   ER    +S   AL  LH  C   +D L   H G
Sbjct: 235 SGNTNRVRSLSFKTSKDRTSPTYGRKSERTFVFESKGRALVGLHGRCCWAIDAL-GAHFG 293

Query: 493 DLP 485
             P
Sbjct: 294 APP 296


>At1g32190.1 68414.m03959 expressed protein
          Length = 422

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
 Frame = -2

Query: 240 CQTNCLRYPPNCPEALCSCPQVCEAVGEYE----GREGADVYCMDLCIVYPPKCPTDKC 76
           C+ +C    P CP+  CSC   C   G ++      +G    C     V    CPT KC
Sbjct: 301 CRPSCSCPKPRCPKPSCSCGCGCGDCGCFKCSCPTLKGCFSCCKKPSCVSSCCCPTFKC 359


>At1g51490.1 68414.m05795 glycosyl hydrolase family 1 protein
           contains Pfam PF00232 : Glycosyl hydrolase family 1
           domain; similar to Cyanogenic Beta-Glucosidase
           (GI:1311386) (pdb:1CBG)  [Trifolium repens] (J. Mol.
           Biol. 229 (3), 791-793 (1993))
          Length = 484

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +1

Query: 586 FLRRVQRYQEPVFSGFRNVKGISVEXLLSRFLFRVVVWTQLHHERSQVI 732
           F RR+ R  +P +S F+N      E L  RF  RV  W  L+   S  +
Sbjct: 147 FRRRIWRLLKPTYSDFKNY----AELLFQRFGDRVKFWITLNQPYSLAV 191


>At5g24620.1 68418.m02908 thaumatin-like protein, putative similar
           to thaumatin-like protein [Arabidopsis thaliana]
           GI:2435406; contains Pfam profile PF00314: Thaumatin
           family
          Length = 420

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 29/141 (20%), Positives = 50/141 (35%), Gaps = 1/141 (0%)
 Frame = -2

Query: 531 VPQWTYYTGNMWGICPNGTEAVGCGRSETFRNCADVSVITSTGGLPPAFAGDLRRDYPFL 352
           +P    ++G +W       +A G G+  T  +C         G  PP    ++   +   
Sbjct: 65  IPTALGWSGRIWARTGCNFDANGAGKCMT-GDCGGKLECAGNGAAPPTSLFEITLGHG-- 121

Query: 351 LYYRDLNMPKSIYPLVVRDQVCVPSYGFRNLPGMLSWCQ-TNCLRYPPNCPEALCSCPQV 175
                 +  K  Y + + D   +P        G++  C  T C+       +   SCP+ 
Sbjct: 122 ------SDDKDFYDVSLVDGYNLPIVALPTGGGLVGACNATGCVA------DINISCPKE 169

Query: 174 CEAVGEYEGREGADVYCMDLC 112
            + +GE E   G  V C   C
Sbjct: 170 LQVMGEEEAERGGVVACKSAC 190


>At4g03940.1 68417.m00557 expressed protein 
          Length = 310

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -2

Query: 267 RNLPGMLSWCQTNCLR 220
           RNLP   SWC+T C R
Sbjct: 179 RNLPRRRSWCETKCRR 194


>At5g64750.1 68418.m08142 AP2 domain-containing transcription
           factor, putative contains similarity to transcription
           factor
          Length = 391

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +2

Query: 80  LSVGHLGG*TIHRSMQYTSAPSRPSYSPTASQT*GQEQRASGQL 211
           L  GH GG ++ +S   +S+ SRP +SP A Q   +    +G L
Sbjct: 329 LRFGHTGG-SMMQSTSSSSSHSRPLFSPAAVQPPPESASETGYL 371


>At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit,
           putative similar to cellulose synthase-1 [gi:9622874]
           and -2 [gi:9622876] from Zea mays
          Length = 1081

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
 Frame = -2

Query: 702 CPNNNPKQEATQEXFDRYPLYVSETREDRFLIPLDTAKKEVFRYRVRLPPYVTCTQCVPQ 523
           C   N +  A +  F +   Y+ +  +  F+      K+E   ++VR+   V   Q +P+
Sbjct: 419 CKKFNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPE 478

Query: 522 --WTYYTGNMW 496
             WT   G  W
Sbjct: 479 EGWTMQDGTPW 489


>At3g12500.1 68416.m01556 basic endochitinase identical to basic
           endochitinase precursor SP:P19171 from [Arabidopsis
           thaliana]
          Length = 322

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
 Frame = -2

Query: 492 ICPNG---TEAVGCGRSETFRNCADVSVITSTGGLPPAFAGDL 373
           +CPNG   +E   CG +E +          + GG PP   GDL
Sbjct: 31  LCPNGLCCSEFGWCGNTEPYCKQPGCQSQCTPGGTPPGPTGDL 73


>At2g47450.1 68415.m05922 chloroplast signal recognition particle
           component (CAO) nearly identical to CAO [Arabidopsis
           thaliana] GI:4102582
          Length = 373

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -2

Query: 771 VGQEIEVEXE--LTANHLGTFVMKLCPNNNPKQ 679
           +G +IEVE E  LTA  L   ++K  P  NP Q
Sbjct: 216 LGADIEVEDERGLTALELAREILKTTPKGNPMQ 248


>At2g25540.1 68415.m03057 cellulose synthase, catalytic subunit,
           putative similar to cellulose synthase-1 [gi:9622874]
           and -2 [gi:9622876] from Zea mays
          Length = 1065

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
 Frame = -2

Query: 702 CPNNNPKQEATQEXFDRYPLYVSETREDRFLIPLDTAKKEVFRYRVRLPPYVTCTQCVPQ 523
           C   N +  A +  F +   Y+ +  +  F+      K+E   ++VR+   V   Q +P+
Sbjct: 406 CKKFNIEPRAPEFYFSQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINILVAKAQKIPE 465

Query: 522 --WTYYTGNMW 496
             WT   G  W
Sbjct: 466 DGWTMEDGTSW 476


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,873,530
Number of Sequences: 28952
Number of extensions: 344085
Number of successful extensions: 1004
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1726528800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)