Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_N18
         (855 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029153-1|ABJ17088.1|  708|Drosophila melanogaster SD01194p pro...    31   2.0  
BT028873-1|ABI34254.1|  708|Drosophila melanogaster SD20656p pro...    31   2.0  

>BT029153-1|ABJ17088.1|  708|Drosophila melanogaster SD01194p
           protein.
          Length = 708

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
 Frame = +1

Query: 115 GPLNLVGTLSPRHKNISEHFH*D--PSHYLSASSTTISTGLCPTNTFLRISSQYSFSSVK 288
           GP + +  +SP H N SE    D   S Y  +S +T  +  C T+     SS YS S  +
Sbjct: 70  GPSSRMRNISPIHSNASESTEADCSDSSYSDSSYSTSGSSSC-TSFLSSTSSSYSSSDSE 128

Query: 289 LSSSGCPKCCSKVSFKC 339
               G  K   +    C
Sbjct: 129 PEPEGSVKKFERTKHSC 145


>BT028873-1|ABI34254.1|  708|Drosophila melanogaster SD20656p
           protein.
          Length = 708

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
 Frame = +1

Query: 115 GPLNLVGTLSPRHKNISEHFH*D--PSHYLSASSTTISTGLCPTNTFLRISSQYSFSSVK 288
           GP + +  +SP H N SE    D   S Y  +S +T  +  C T+     SS YS S  +
Sbjct: 70  GPSSRMRNISPIHSNASESTEADCSDSSYSDSSYSTSGSSSC-TSFLSSTSSSYSSSDSE 128

Query: 289 LSSSGCPKCCSKVSFKC 339
               G  K   +    C
Sbjct: 129 PEPEGSVKKFERTKHSC 145


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,003,368
Number of Sequences: 53049
Number of extensions: 607447
Number of successful extensions: 2035
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2035
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4106450400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)