Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_N18
(855 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110501-2|CAE47474.1| 1271|Caenorhabditis elegans Hypothetical ... 30 1.8
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 30 1.8
Z46937-5|CAA87057.1| 376|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z46937-2|CAB60996.1| 444|Caenorhabditis elegans Hypothetical pr... 29 5.6
U27124-1|AAA73482.1| 376|Caenorhabditis elegans MPK-1 protein. 29 5.6
U03879-1|AAA18956.1| 444|Caenorhabditis elegans Sur-1 MAP kinas... 29 5.6
AF016686-7|AAB66241.2| 664|Caenorhabditis elegans C-type lectin... 29 5.6
AF068721-1|AAC19263.1| 369|Caenorhabditis elegans Hypothetical ... 28 9.7
AC006684-10|AAF39962.2| 665|Caenorhabditis elegans Hypothetical... 28 9.7
>AL110501-2|CAE47474.1| 1271|Caenorhabditis elegans Hypothetical
protein Y79H2A.3b protein.
Length = 1271
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +1
Query: 286 KLSSSGCPKCCSKVSFK--CRVGSRHWSRTLGSRPSSRVQSKFRKCSLVASRPPLSCSAM 459
++ SSG C + SF CR R + P++R KF + RPPL+C +
Sbjct: 801 EIFSSGNLPICWEFSFSANCRFAENFHFRQIAGFPANRQFFKF--AGKIVFRPPLNCELL 858
Query: 460 VL 465
V+
Sbjct: 859 VI 860
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +1
Query: 286 KLSSSGCPKCCSKVSFK--CRVGSRHWSRTLGSRPSSRVQSKFRKCSLVASRPPLSCSAM 459
++ SSG C + SF CR R + P++R KF + RPPL+C +
Sbjct: 801 EIFSSGNLPICWEFSFSANCRFAENFHFRQIAGFPANRQFFKF--AGKIVFRPPLNCELL 858
Query: 460 VL 465
V+
Sbjct: 859 VI 860
>Z46937-5|CAA87057.1| 376|Caenorhabditis elegans Hypothetical
protein F43C1.2a protein.
Length = 376
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Frame = -2
Query: 392 LLEGLDPRVLDQCRDPTL----HLKETLEQHLGHPELESFTE--EKEYCEE 258
L G DPR LD D L H + +EQ L HP LE + + ++ CEE
Sbjct: 281 LYPGADPRALDLL-DKMLTFNPHNRIDIEQALAHPYLEQYYDPGDEPVCEE 330
>Z46937-2|CAB60996.1| 444|Caenorhabditis elegans Hypothetical
protein F43C1.2b protein.
Length = 444
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Frame = -2
Query: 392 LLEGLDPRVLDQCRDPTL----HLKETLEQHLGHPELESFTE--EKEYCEE 258
L G DPR LD D L H + +EQ L HP LE + + ++ CEE
Sbjct: 349 LYPGADPRALDLL-DKMLTFNPHNRIDIEQALAHPYLEQYYDPGDEPVCEE 398
>U27124-1|AAA73482.1| 376|Caenorhabditis elegans MPK-1 protein.
Length = 376
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Frame = -2
Query: 392 LLEGLDPRVLDQCRDPTL----HLKETLEQHLGHPELESFTE--EKEYCEE 258
L G DPR LD D L H + +EQ L HP LE + + ++ CEE
Sbjct: 281 LYPGADPRALDLL-DKMLTFNPHNRIDIEQALAHPYLEQYYDPGDEPVCEE 330
>U03879-1|AAA18956.1| 444|Caenorhabditis elegans Sur-1 MAP kinase
protein.
Length = 444
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Frame = -2
Query: 392 LLEGLDPRVLDQCRDPTL----HLKETLEQHLGHPELESFTE--EKEYCEE 258
L G DPR LD D L H + +EQ L HP LE + + ++ CEE
Sbjct: 349 LYPGADPRALDLL-DKMLTFNPHNRIDIEQALAHPYLEQYYDPGDEPVCEE 398
>AF016686-7|AAB66241.2| 664|Caenorhabditis elegans C-type lectin
protein 44 protein.
Length = 664
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -2
Query: 560 EPSARTKAAFLIRYLASQYSDAKEQFIQHNVVRTIAEQLRGG 435
EP AR L L S +S A+ FIQ + T+ ++ R G
Sbjct: 278 EPDAREFCLSLSEDLVSIHSQAENDFIQSLISNTVIDEFRTG 319
>AF068721-1|AAC19263.1| 369|Caenorhabditis elegans Hypothetical
protein ZK1055.5 protein.
Length = 369
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 353 RDPTLHLKETLEQHLGHPELESFTEE 276
RDPT++L++ + H+G F EE
Sbjct: 47 RDPTIYLRQNVHTHIGDISFLEFREE 72
>AC006684-10|AAF39962.2| 665|Caenorhabditis elegans Hypothetical
protein T02H6.2 protein.
Length = 665
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -2
Query: 362 DQCRDPTLHLKETLEQHLGHPELESFTEEKEYCEEILRKVFVGHKPVE 219
D DPT ++KE LE+++ + ++F E KE E +K K VE
Sbjct: 499 DTKTDPTTNIKEFLERNM-YNAAKNFNEFKESIENREKKEAEARKKVE 545
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,441,159
Number of Sequences: 27780
Number of extensions: 298843
Number of successful extensions: 984
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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