Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_N15
(789 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 353 8e-98
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 353 8e-98
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 353 8e-98
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 351 4e-97
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 351 4e-97
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 338 2e-93
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 252 3e-67
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 133 1e-31
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 132 3e-31
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 132 3e-31
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 132 3e-31
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 131 4e-31
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 131 6e-31
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 130 1e-30
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 130 1e-30
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 129 2e-30
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 66 3e-11
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 63 2e-10
At5g33320.1 68418.m03955 triose phosphate/phosphate translocator... 33 0.29
At3g62210.1 68416.m06989 expressed protein contains Pfam profile... 33 0.29
At2g40070.1 68415.m04923 expressed protein 33 0.29
At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 1.5
At3g11690.1 68416.m01433 expressed protein 29 3.5
At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to ... 29 4.6
At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 28 6.1
At1g68080.1 68414.m07777 expressed protein 28 6.1
At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase... 28 6.1
At3g26855.1 68416.m03360 hypothetical protein 28 8.1
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 353 bits (868), Expect = 8e-98
Identities = 167/217 (76%), Positives = 183/217 (84%), Gaps = 2/217 (0%)
Frame = -1
Query: 777 PTYTNL--IVSSDRFXLDHXFXEIDAL*X*PHRVPD*LVPYPRIHFPLVTYAPVISAEKA 604
PTYTNL +VS L AL LVPYPRIHF L +YAPVISAEKA
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA 281
Query: 603 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI 424
+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTI
Sbjct: 282 FHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTI 341
Query: 423 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAK 244
QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAK
Sbjct: 342 QFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAK 401
Query: 243 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 133
RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 353 bits (868), Expect = 8e-98
Identities = 167/217 (76%), Positives = 183/217 (84%), Gaps = 2/217 (0%)
Frame = -1
Query: 777 PTYTNL--IVSSDRFXLDHXFXEIDAL*X*PHRVPD*LVPYPRIHFPLVTYAPVISAEKA 604
PTYTNL +VS L AL LVPYPRIHF L +YAPVISAEKA
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA 281
Query: 603 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI 424
+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTI
Sbjct: 282 FHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTI 341
Query: 423 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAK 244
QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAK
Sbjct: 342 QFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAK 401
Query: 243 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 133
RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 353 bits (868), Expect = 8e-98
Identities = 167/217 (76%), Positives = 183/217 (84%), Gaps = 2/217 (0%)
Frame = -1
Query: 777 PTYTNL--IVSSDRFXLDHXFXEIDAL*X*PHRVPD*LVPYPRIHFPLVTYAPVISAEKA 604
PTYTNL +VS L AL LVPYPRIHF L +YAPVISAEKA
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA 281
Query: 603 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI 424
+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTI
Sbjct: 282 FHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTI 341
Query: 423 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAK 244
QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAK
Sbjct: 342 QFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAK 401
Query: 243 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 133
RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 351 bits (862), Expect = 4e-97
Identities = 156/180 (86%), Positives = 168/180 (93%)
Frame = -1
Query: 672 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 493
LVPYPRIHF L +YAPVISA KAYHEQLSV EITNA FEPA+ M KCDPRHGKYMACC++
Sbjct: 259 LVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLM 318
Query: 492 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 313
YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+
Sbjct: 319 YRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMI 378
Query: 312 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 133
SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 379 SNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 351 bits (862), Expect = 4e-97
Identities = 156/180 (86%), Positives = 168/180 (93%)
Frame = -1
Query: 672 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 493
LVPYPRIHF L +YAPVISA KAYHEQLSV EITNA FEPA+ M KCDPRHGKYMACC++
Sbjct: 259 LVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLM 318
Query: 492 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 313
YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+
Sbjct: 319 YRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMI 378
Query: 312 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 133
SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 379 SNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 338 bits (831), Expect = 2e-93
Identities = 149/178 (83%), Positives = 163/178 (91%)
Frame = -1
Query: 672 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 493
LVPYPRIHF L +YAPVIS+ KAYHEQ SV EIT + FEP+N M KCDPRHGKYMACC++
Sbjct: 259 LVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSNMMAKCDPRHGKYMACCLM 318
Query: 492 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 313
YRGDVVPKDVN A+A IK KRTIQFVDWCPTGFK GINYQPP+VVPGGDLAKVQRAVCM+
Sbjct: 319 YRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMI 378
Query: 312 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 139
SN TA+AE ++R+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG
Sbjct: 379 SNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 436
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 252 bits (616), Expect = 3e-67
Identities = 121/165 (73%), Positives = 133/165 (80%), Gaps = 2/165 (1%)
Frame = -1
Query: 777 PTYTNL--IVSSDRFXLDHXFXEIDAL*X*PHRVPD*LVPYPRIHFPLVTYAPVISAEKA 604
PTYTNL +VS L AL LVPYPRIHF L +YAPVISAEKA
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA 281
Query: 603 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI 424
+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTI
Sbjct: 282 FHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTI 341
Query: 423 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 289
QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE
Sbjct: 342 QFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAE 386
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 133 bits (321), Expect = 1e-31
Identities = 60/176 (34%), Positives = 102/176 (57%)
Frame = -1
Query: 672 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 493
L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ +
Sbjct: 258 LIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAM 317
Query: 492 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 313
+RG + K+V+ I ++ K + FV+W P K + PPT ++ A +
Sbjct: 318 FRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPT--------GIKMASTFV 369
Query: 312 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 145
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 370 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 132 bits (318), Expect = 3e-31
Identities = 59/176 (33%), Positives = 102/176 (57%)
Frame = -1
Query: 672 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 493
L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ +
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAM 316
Query: 492 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 313
+RG + K+V+ + ++ K + FV+W P K + PPT ++ A +
Sbjct: 317 FRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFI 368
Query: 312 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 145
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 132 bits (318), Expect = 3e-31
Identities = 59/176 (33%), Positives = 102/176 (57%)
Frame = -1
Query: 672 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 493
L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ +
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAM 316
Query: 492 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 313
+RG + K+V+ + ++ K + FV+W P K + PPT ++ A +
Sbjct: 317 FRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFI 368
Query: 312 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 145
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 132 bits (318), Expect = 3e-31
Identities = 59/176 (33%), Positives = 102/176 (57%)
Frame = -1
Query: 672 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 493
L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ +
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDAKNMMCAADPRHGRYLTASAM 316
Query: 492 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 313
+RG + K+V+ + ++ K + FV+W P K + PPT ++ A +
Sbjct: 317 FRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFI 368
Query: 312 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 145
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 131 bits (317), Expect = 4e-31
Identities = 59/176 (33%), Positives = 102/176 (57%)
Frame = -1
Query: 672 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 493
L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ +
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAM 316
Query: 492 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 313
+RG + K+V+ + ++ K + FV+W P K + PPT ++ A +
Sbjct: 317 FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFI 368
Query: 312 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 145
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 131 bits (316), Expect = 6e-31
Identities = 60/176 (34%), Positives = 101/176 (57%)
Frame = -1
Query: 672 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 493
L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ +
Sbjct: 258 LIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGRYLTASAI 317
Query: 492 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 313
+RG + K+V+ I I+ K + FV+W P K + PP ++ A +
Sbjct: 318 FRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIPP--------KGLKMAATFV 369
Query: 312 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 145
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 370 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 425
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 130 bits (314), Expect = 1e-30
Identities = 60/176 (34%), Positives = 102/176 (57%)
Frame = -1
Query: 672 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 493
L+P+PR+HF +V +AP+ S + LSV E+T ++ N M DPRHG+Y+ +
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAV 316
Query: 492 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 313
+RG + K+V+ + I+ K + FV+W P K + + P G ++ A +
Sbjct: 317 FRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSV----CDIAPKG----LKMASTFI 368
Query: 312 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 145
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 130 bits (313), Expect = 1e-30
Identities = 59/176 (33%), Positives = 102/176 (57%)
Frame = -1
Query: 672 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 493
L+P+PR+HF +V +AP+ S + LSV E+T ++ N M DPRHG+Y+ +
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAV 316
Query: 492 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 313
+RG + K+V+ + ++ K + FV+W P K + + P G ++ A +
Sbjct: 317 FRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSV----CDIAPTG----LKMASTFI 368
Query: 312 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 145
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 129 bits (311), Expect = 2e-30
Identities = 58/176 (32%), Positives = 101/176 (57%)
Frame = -1
Query: 672 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 493
L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ +
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAM 316
Query: 492 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 313
+RG + K+V+ + ++ K + FV+W P K + + P G + A +
Sbjct: 317 FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV----CDIAPRG----LSMASTFI 368
Query: 312 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 145
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 65.7 bits (153), Expect = 3e-11
Identities = 45/185 (24%), Positives = 92/185 (49%), Gaps = 10/185 (5%)
Frame = -1
Query: 672 LVPYPRIHFPLVTYAPVISAEKA-YHEQLSVAEITNACFEPANQMVKCDPRH-----GKY 511
L+P PR HF + Y P+ +A + +V ++ + N MV R+ KY
Sbjct: 260 LIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKY 319
Query: 510 MACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 331
++ + +G+V P V+ ++ I+ ++ + F+DW P +V ++ + P V ++ +
Sbjct: 320 ISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPYVQTSHRVSGL- 378
Query: 330 RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM----EEGEFSEAREDLAAL 163
ML++ T+I ++R ++D + K+AF+ Y M + EF E+R+ + +L
Sbjct: 379 ----MLASHTSIRHLFSRCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESL 434
Query: 162 EKDYE 148
+Y+
Sbjct: 435 VDEYK 439
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 62.9 bits (146), Expect = 2e-10
Identities = 43/185 (23%), Positives = 92/185 (49%), Gaps = 10/185 (5%)
Frame = -1
Query: 672 LVPYPRIHFPLVTYAPVISAEKA-YHEQLSVAEITNACFEPANQMVKCDPRH-----GKY 511
L+P PR HF + Y P+ +A + +V ++ + N MV R+ KY
Sbjct: 260 LIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKY 319
Query: 510 MACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 331
++ + +G+V P V+ ++ I+ ++ + F++W P +V ++ + P V ++ +
Sbjct: 320 ISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPYVQTAHRVSGL- 378
Query: 330 RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM----EEGEFSEAREDLAAL 163
ML++ T+I +++ ++D + K+AF+ Y M + EF E+R+ + +L
Sbjct: 379 ----MLASHTSIRHLFSKCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESL 434
Query: 162 EKDYE 148
+Y+
Sbjct: 435 VDEYK 439
>At5g33320.1 68418.m03955 triose phosphate/phosphate translocator,
putative similar to SWISS-PROT:P52178 triose
phosphate/phosphate translocator [Cauliflower] {Brassica
oleracea}
Length = 408
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 278 ALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTW 171
A ++S + +P+V+S S R WR SS P+R W
Sbjct: 31 AASSSDLNVSPNVVSIPSLSRRSWRLASSDSPLRAW 66
>At3g62210.1 68416.m06989 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537; expression
supported by MPSS
Length = 279
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 454 GRVHILGY-DVTTVQHTASHVLAMTGVAFHHLVGGLE 561
GRV I Y D + + H H L TG+ HH+ G++
Sbjct: 59 GRVSISAYGDTSGIPHVIQHALNSTGIELHHVPAGVK 95
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 32.7 bits (71), Expect = 0.29
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Frame = -2
Query: 662 TPVSTS-HWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTV 486
TP+S S S +R + +PT ++ S S T S+P T +A P ++T L+ T
Sbjct: 236 TPMSRSTSLSSSRLTPTASKPTTSTARSAGSVTR-STPSTTTKSAGPSRSTTPLSRS-TA 293
Query: 485 VTSYPRM*TRPSLPSKPSVLSNSSTGVQPV-SRSVSTTSHPP 363
+S P +RP+LP ++ +S+ +P+ S S +TT+ P
Sbjct: 294 RSSTPT--SRPTLPPSKTISRSSTPTRRPIASASAATTTANP 333
>At1g29200.1 68414.m03573 hypothetical protein contains Pfam
PF03138: Plant protein family. The function of this
family of plant proteins is unknown;
Length = 698
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 373 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 477
LV DT+L TPVD ++ L G VH+ GY
Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394
>At3g11690.1 68416.m01433 expressed protein
Length = 252
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = -2
Query: 680 QTNXCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLA 501
QT TP S+ S RQ L R +++S PSPR+ S+P T A+ W
Sbjct: 15 QTKPSDTPSSSPSRSNRRQPLLQR--SLSS-PSPRASCGGSTPAEFCGGTTASCAAVWCC 71
Query: 500 VCCTVV 483
C +V
Sbjct: 72 CPCGLV 77
>At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to
SP|P11035 Nitrate reductase 2 (formerly EC 1.6.6.1)
(NR2) {Arabidopsis thaliana}
Length = 917
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 150 RNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRT 266
R +R +PG +G+ R+ PP P R S + H +T +T
Sbjct: 8 RQYARLEPGLNGVVRSYKPPVPGRSDSPKAHQNQTTNQT 46
>At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 587
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -1
Query: 489 RGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 346
+G V D A T TK+ + DW P+ FK PP ++P D
Sbjct: 308 QGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355
>At1g68080.1 68414.m07777 expressed protein
Length = 383
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 415 DELDSTLGFDGSDGRVHILGYDVTTVQ 495
D + +GFD R+H+LG+DV ++Q
Sbjct: 211 DGSNQNIGFDVCVARLHLLGFDVHSLQ 237
>At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase
(MAPKK), putative (MKK4) identical to MAP kinase kinase
4 [Arabidopsis thaliana] gi|3219271|dbj|BAA28830
gi_13265419
Length = 366
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +3
Query: 63 ASAP*KIFHWLSTLRLPHPRLQRSPCRLLRNPS--RGQPG----PHGLRRTLPPPYPHRR 224
A+A + H++S P +RS +LL++P R P P L + LPPP P
Sbjct: 301 ATASPEFRHFISCCLQREPGKRRSAMQLLQHPFILRASPSQNRSPQNLHQLLPPPRPLSS 360
Query: 225 TSA 233
+S+
Sbjct: 361 SSS 363
>At3g26855.1 68416.m03360 hypothetical protein
Length = 163
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 257 SCTPSVLSCTGTSVRVWRRESSPK 186
SC P +LS + VR W +SSPK
Sbjct: 114 SCNPMLLSTFPSIVRAWDGKSSPK 137
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,613,350
Number of Sequences: 28952
Number of extensions: 371453
Number of successful extensions: 1408
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1396
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1775300800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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