Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_N13
(777 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83240-1|CAB05815.2| 373|Caenorhabditis elegans Hypothetical pr... 68 9e-12
AY204178-1|AAO39182.1| 373|Caenorhabditis elegans nuclear recep... 68 9e-12
U41542-10|AAX88836.1| 486|Caenorhabditis elegans Nuclear hormon... 58 7e-09
U41542-9|AAK39150.3| 542|Caenorhabditis elegans Nuclear hormone... 58 7e-09
AY305836-1|AAR11981.1| 487|Caenorhabditis elegans nuclear recep... 58 7e-09
AF273781-1|AAG15130.1| 508|Caenorhabditis elegans nuclear recep... 58 7e-09
U41559-7|AAV34794.1| 544|Caenorhabditis elegans Nuclear hormone... 55 5e-08
U41559-6|AAC24263.1| 583|Caenorhabditis elegans Nuclear hormone... 55 5e-08
AF273779-1|AAG15128.1| 565|Caenorhabditis elegans nuclear recep... 55 5e-08
AF273778-1|AAG15127.1| 595|Caenorhabditis elegans nuclear recep... 55 5e-08
AF273777-1|AAG15126.1| 421|Caenorhabditis elegans nuclear recep... 55 5e-08
AF273776-1|AAG15125.1| 583|Caenorhabditis elegans nuclear recep... 55 5e-08
Z83235-5|CAD21653.1| 476|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AF273795-1|AAG15143.1| 475|Caenorhabditis elegans nuclear recep... 52 3e-07
Z83235-7|CAD57703.1| 486|Caenorhabditis elegans Hypothetical pr... 51 8e-07
Z83235-6|CAD57702.1| 501|Caenorhabditis elegans Hypothetical pr... 51 8e-07
Z83235-4|CAB05772.1| 477|Caenorhabditis elegans Hypothetical pr... 51 8e-07
AY204174-1|AAO39178.1| 344|Caenorhabditis elegans nuclear recep... 51 8e-07
AY204173-1|AAO39177.1| 369|Caenorhabditis elegans nuclear recep... 51 8e-07
AY204172-1|AAO39176.1| 234|Caenorhabditis elegans nuclear recep... 51 8e-07
AF332206-1|AAK17977.1| 381|Caenorhabditis elegans nuclear recep... 51 8e-07
AF273793-1|AAG15141.1| 474|Caenorhabditis elegans nuclear recep... 51 8e-07
AF273792-1|AAG15140.1| 337|Caenorhabditis elegans nuclear recep... 51 8e-07
AF043694-2|AAT27251.1| 387|Caenorhabditis elegans Nuclear hormo... 51 8e-07
AF043694-1|AAC24283.1| 412|Caenorhabditis elegans Nuclear hormo... 51 8e-07
EF601082-1|ABQ96204.1| 370|Caenorhabditis elegans UNC-55a isofo... 49 3e-06
EF601077-1|ABQ96199.1| 357|Caenorhabditis elegans UNC-55b isofo... 49 3e-06
U97551-2|AAP13776.1| 434|Caenorhabditis elegans Nuclear hormone... 47 2e-05
U97551-1|AAP13775.1| 435|Caenorhabditis elegans Nuclear hormone... 47 2e-05
AF083229-1|AAD03687.1| 288|Caenorhabditis elegans nuclear recep... 47 2e-05
Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear recep... 44 1e-04
AY204184-1|AAO39188.1| 353|Caenorhabditis elegans nuclear recep... 44 1e-04
AF016443-2|AAC24272.1| 359|Caenorhabditis elegans Hypothetical ... 39 0.003
U46670-2|AAC48174.4| 440|Caenorhabditis elegans Nuclear hormone... 38 0.006
U46670-1|AAP46277.1| 445|Caenorhabditis elegans Nuclear hormone... 38 0.006
AY204166-1|AAO39170.1| 436|Caenorhabditis elegans nuclear recep... 38 0.006
AY204165-1|AAO39169.1| 445|Caenorhabditis elegans nuclear recep... 38 0.006
AY204164-1|AAO39168.1| 440|Caenorhabditis elegans nuclear recep... 38 0.006
AY204163-1|AAO39167.1| 440|Caenorhabditis elegans nuclear recep... 38 0.006
U10438-5|AAA19086.1| 395|Caenorhabditis elegans Nuclear hormone... 38 0.008
AY204168-1|AAO39172.1| 395|Caenorhabditis elegans nuclear recep... 38 0.008
Z82259-10|CAD36480.1| 439|Caenorhabditis elegans Hypothetical p... 38 0.011
AL022473-2|CAA18549.2| 439|Caenorhabditis elegans Hypothetical ... 38 0.011
AL022473-1|CAJ43448.1| 339|Caenorhabditis elegans Hypothetical ... 38 0.011
AF332211-1|AAK17982.1| 439|Caenorhabditis elegans nuclear recep... 38 0.011
Z92825-8|CAB07316.2| 469|Caenorhabditis elegans Hypothetical pr... 35 0.056
Z92825-1|CAB07313.1| 415|Caenorhabditis elegans Hypothetical pr... 35 0.056
Z75955-18|CAB00126.2| 469|Caenorhabditis elegans Hypothetical p... 35 0.056
AF273830-1|AAG15179.1| 598|Caenorhabditis elegans nuclear recep... 35 0.056
AC006671-1|AAF39914.2| 593|Caenorhabditis elegans Nuclear hormo... 35 0.056
Z96048-5|CAB09422.1| 443|Caenorhabditis elegans Hypothetical pr... 35 0.075
AF273808-1|AAG15157.1| 442|Caenorhabditis elegans nuclear recep... 35 0.075
Z54270-7|CAE48496.1| 492|Caenorhabditis elegans Hypothetical pr... 34 0.099
Z54270-6|CAA91028.1| 572|Caenorhabditis elegans Hypothetical pr... 34 0.099
U50308-8|AAG24032.1| 562|Caenorhabditis elegans Hypothetical pr... 34 0.099
AF179215-1|AAF67039.1| 492|Caenorhabditis elegans NHR-25 beta p... 34 0.099
AF179214-1|AAF67038.1| 568|Caenorhabditis elegans NHR-25 alpha ... 34 0.099
Z50004-1|CAA90291.1| 396|Caenorhabditis elegans Hypothetical pr... 34 0.13
U97008-1|AAB52310.1| 370|Caenorhabditis elegans Hypothetical pr... 34 0.13
U40940-3|AAN39667.1| 455|Caenorhabditis elegans Nuclear hormone... 34 0.13
U40940-2|AAM69090.1| 434|Caenorhabditis elegans Nuclear hormone... 34 0.13
U40940-1|AAM69089.1| 439|Caenorhabditis elegans Nuclear hormone... 34 0.13
U40160-2|AAA81156.1| 547|Caenorhabditis elegans Hypothetical pr... 34 0.13
AF273782-1|AAG15131.1| 439|Caenorhabditis elegans nuclear recep... 34 0.13
Z75955-10|CAB00124.2| 410|Caenorhabditis elegans Hypothetical p... 33 0.17
AY349018-1|AAQ55498.1| 310|Caenorhabditis elegans NHR-91B protein. 33 0.30
AY349017-1|AAQ55497.1| 474|Caenorhabditis elegans NHR-91A protein. 33 0.30
AL132841-5|CAI46629.1| 310|Caenorhabditis elegans Hypothetical ... 33 0.30
AL132841-4|CAB60329.2| 474|Caenorhabditis elegans Hypothetical ... 33 0.30
AF273835-1|AAG15183.1| 476|Caenorhabditis elegans nuclear recep... 33 0.30
AF273834-1|AAG15182.1| 475|Caenorhabditis elegans nuclear recep... 33 0.30
AF273833-1|AAG15181.1| 475|Caenorhabditis elegans nuclear recep... 33 0.30
Z75955-11|CAB00125.1| 412|Caenorhabditis elegans Hypothetical p... 32 0.40
Z75955-9|CAB00123.1| 406|Caenorhabditis elegans Hypothetical pr... 32 0.40
AC006674-1|AAK68390.1| 388|Caenorhabditis elegans Nuclear hormo... 32 0.40
Z83235-10|CAB05776.2| 515|Caenorhabditis elegans Hypothetical p... 32 0.53
Z81496-11|CAB04069.2| 448|Caenorhabditis elegans Hypothetical p... 32 0.53
AY204204-1|AAO39205.1| 448|Caenorhabditis elegans nuclear recep... 32 0.53
AY204201-1|AAO39202.1| 409|Caenorhabditis elegans nuclear recep... 32 0.53
AY204162-1|AAO39166.1| 112|Caenorhabditis elegans nuclear recep... 32 0.53
AL032645-2|CAA21675.2| 515|Caenorhabditis elegans Hypothetical ... 32 0.53
AF273814-1|AAG15163.1| 489|Caenorhabditis elegans nuclear recep... 32 0.53
AF273813-1|AAG15162.1| 454|Caenorhabditis elegans nuclear recep... 32 0.53
Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical p... 31 0.70
AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical ... 31 0.70
AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic mul... 31 0.70
Z92825-6|CAB07314.2| 435|Caenorhabditis elegans Hypothetical pr... 31 0.92
Z68222-9|CAE46689.1| 631|Caenorhabditis elegans Hypothetical pr... 31 0.92
Z68222-8|CAC70146.2| 613|Caenorhabditis elegans Hypothetical pr... 31 0.92
Z68217-11|CAE46673.1| 631|Caenorhabditis elegans Hypothetical p... 31 0.92
Z68217-10|CAC70099.2| 613|Caenorhabditis elegans Hypothetical p... 31 0.92
Z68217-4|CAA92467.2| 499|Caenorhabditis elegans Hypothetical pr... 31 0.92
AF273780-1|AAG15129.1| 509|Caenorhabditis elegans nuclear recep... 31 0.92
Z81050-12|CAN86586.1| 420|Caenorhabditis elegans Hypothetical p... 31 1.2
Z81050-11|CAN86585.1| 399|Caenorhabditis elegans Hypothetical p... 31 1.2
U97008-3|AAB52308.1| 380|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL021387-2|CAA16168.1| 463|Caenorhabditis elegans Hypothetical ... 30 1.6
AF408754-1|AAO27833.1| 418|Caenorhabditis elegans nuclear recep... 30 1.6
AF273769-1|AAG15118.1| 463|Caenorhabditis elegans nuclear recep... 30 1.6
AF083222-1|AAD03680.1| 463|Caenorhabditis elegans nuclear recep... 30 1.6
AC084155-10|AAG23368.3| 418|Caenorhabditis elegans Nuclear horm... 30 1.6
Z81050-13|CAB02857.3| 448|Caenorhabditis elegans Hypothetical p... 30 2.1
Z75542-4|CAA99861.1| 424|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF078157-6|AAQ62458.1| 406|Caenorhabditis elegans Hypothetical ... 30 2.1
Z75955-8|CAB00122.1| 410|Caenorhabditis elegans Hypothetical pr... 29 2.8
U97003-2|AAB52271.2| 376|Caenorhabditis elegans Hypothetical pr... 29 2.8
AY204202-1|AAO39203.1| 339|Caenorhabditis elegans nuclear recep... 29 2.8
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 29 3.7
Z92837-4|CAH10846.1| 193|Caenorhabditis elegans Hypothetical pr... 29 4.9
AF016665-9|AAC71177.1| 363|Caenorhabditis elegans Nuclear hormo... 29 4.9
AY204185-1|AAO39189.1| 400|Caenorhabditis elegans nuclear recep... 28 6.5
AL022272-4|CAC42310.2| 391|Caenorhabditis elegans Hypothetical ... 28 6.5
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 28 8.6
Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical pr... 28 8.6
>Z83240-1|CAB05815.2| 373|Caenorhabditis elegans Hypothetical
protein T23H4.2 protein.
Length = 373
Score = 67.7 bits (158), Expect = 9e-12
Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Frame = -3
Query: 718 NKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLNDERENVDSRN 539
++Q+ I WA+ +P F DQ L+KG +++ +A+RS+ + N
Sbjct: 150 HQQLVLFIEWAKSLPQFSFLAQADQAALLKGGAASIIVLGVAYRSI--------CLTVEN 201
Query: 538 TAPPQLICLMPGMTLQRNSALQAG-VGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILL 362
T ICL L + A Q G + + R++ E+ MR L MD EYVALKAI+
Sbjct: 202 T-----ICLANDTLLPKEHATQVGDINCVVGRIIDEIVNPMRRLNMDLIEYVALKAILFF 256
Query: 361 NPDVKGLKNKQEVDVLREKMFLCLDEYC 278
NP V+ + ++ V+ R L C
Sbjct: 257 NPVVREINDQSPVENARYAFLRSLQRRC 284
>AY204178-1|AAO39182.1| 373|Caenorhabditis elegans nuclear receptor
NHR-69 protein.
Length = 373
Score = 67.7 bits (158), Expect = 9e-12
Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Frame = -3
Query: 718 NKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLNDERENVDSRN 539
++Q+ I WA+ +P F DQ L+KG +++ +A+RS+ + N
Sbjct: 150 HQQLVLFIEWAKSLPQFSFLAQADQAALLKGGAASIIVLGVAYRSI--------CLTVEN 201
Query: 538 TAPPQLICLMPGMTLQRNSALQAG-VGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILL 362
T ICL L + A Q G + + R++ E+ MR L MD EYVALKAI+
Sbjct: 202 T-----ICLANDTLLPKEHATQVGDINCVVGRIIDEIVNPMRRLNMDLIEYVALKAILFF 256
Query: 361 NPDVKGLKNKQEVDVLREKMFLCLDEYC 278
NP V+ + ++ V+ R L C
Sbjct: 257 NPVVREINDQSPVENARYAFLRSLQRRC 284
>U41542-10|AAX88836.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 35, isoform b protein.
Length = 486
Score = 58.0 bits (134), Expect = 7e-09
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 8/166 (4%)
Frame = -3
Query: 748 APVSSLCQIGNKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRS----- 584
A ++ + + + Q+ +I WA+ +P F Q DQ +L+K + + +A+RS
Sbjct: 176 ATLNDVLKSMHSQLLLVIEWAKTLPEFKQLSGADQAVLLKNFAGQHVTLCVAYRSVGAND 235
Query: 583 -MEFLNDERENVDSRNTAPPQLICLMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLR 407
++ LND S+ T P L + G L+ ++V+ +L MR L+
Sbjct: 236 ALKLLNDLYIPRASKTT--PHLKEYVDGFYLRD-----------CEKVMDQLVEPMRFLK 282
Query: 406 MDQAEYVALKAIILLNPDVKGLKNKQEVDVL--REKMFLCLDEYCR 275
+D E+VALKA +L NP GL N VL R K+F ++Y R
Sbjct: 283 LDNKEFVALKACVLFNPVAPGLSNHAVNLVLNARRKIFAAFEKYVR 328
>U41542-9|AAK39150.3| 542|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 35, isoform a protein.
Length = 542
Score = 58.0 bits (134), Expect = 7e-09
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 8/166 (4%)
Frame = -3
Query: 748 APVSSLCQIGNKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRS----- 584
A ++ + + + Q+ +I WA+ +P F Q DQ +L+K + + +A+RS
Sbjct: 232 ATLNDVLKSMHSQLLLVIEWAKTLPEFKQLSGADQAVLLKNFAGQHVTLCVAYRSVGAND 291
Query: 583 -MEFLNDERENVDSRNTAPPQLICLMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLR 407
++ LND S+ T P L + G L+ ++V+ +L MR L+
Sbjct: 292 ALKLLNDLYIPRASKTT--PHLKEYVDGFYLRD-----------CEKVMDQLVEPMRFLK 338
Query: 406 MDQAEYVALKAIILLNPDVKGLKNKQEVDVL--REKMFLCLDEYCR 275
+D E+VALKA +L NP GL N VL R K+F ++Y R
Sbjct: 339 LDNKEFVALKACVLFNPVAPGLSNHAVNLVLNARRKIFAAFEKYVR 384
>AY305836-1|AAR11981.1| 487|Caenorhabditis elegans nuclear receptor
NHR-35 protein.
Length = 487
Score = 58.0 bits (134), Expect = 7e-09
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 8/166 (4%)
Frame = -3
Query: 748 APVSSLCQIGNKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRS----- 584
A ++ + + + Q+ +I WA+ +P F Q DQ +L+K + + +A+RS
Sbjct: 177 ATLNDVLKSMHSQLLLVIEWAKTLPEFKQLSGADQAVLLKNFAGQHVTLCVAYRSVGAND 236
Query: 583 -MEFLNDERENVDSRNTAPPQLICLMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLR 407
++ LND S+ T P L + G L+ ++V+ +L MR L+
Sbjct: 237 ALKLLNDLYIPRASKTT--PHLKEYVDGFYLRD-----------CEKVMDQLVEPMRFLK 283
Query: 406 MDQAEYVALKAIILLNPDVKGLKNKQEVDVL--REKMFLCLDEYCR 275
+D E+VALKA +L NP GL N VL R K+F ++Y R
Sbjct: 284 LDNKEFVALKACVLFNPVAPGLSNHAVNLVLNARRKIFAAFEKYVR 329
>AF273781-1|AAG15130.1| 508|Caenorhabditis elegans nuclear receptor
NHR-35 protein.
Length = 508
Score = 58.0 bits (134), Expect = 7e-09
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 8/166 (4%)
Frame = -3
Query: 748 APVSSLCQIGNKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRS----- 584
A ++ + + + Q+ +I WA+ +P F Q DQ +L+K + + +A+RS
Sbjct: 198 ATLNDVLKSMHSQLLLVIEWAKTLPEFKQLSGADQAVLLKNFAGQHVTLCVAYRSVGAND 257
Query: 583 -MEFLNDERENVDSRNTAPPQLICLMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLR 407
++ LND S+ T P L + G L+ ++V+ +L MR L+
Sbjct: 258 ALKLLNDLYIPRASKTT--PHLKEYVDGFYLRD-----------CEKVMDQLVEPMRFLK 304
Query: 406 MDQAEYVALKAIILLNPDVKGLKNKQEVDVL--REKMFLCLDEYCR 275
+D E+VALKA +L NP GL N VL R K+F ++Y R
Sbjct: 305 LDNKEFVALKACVLFNPVAPGLSNHAVNLVLNARRKIFAAFEKYVR 350
>U41559-7|AAV34794.1| 544|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 31, isoform c protein.
Length = 544
Score = 55.2 bits (127), Expect = 5e-08
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 8/166 (4%)
Frame = -3
Query: 775 EAACRPXXXAPVSSLCQIGNKQIAALIVWARDIPHFGQX-EIDDQILLIKGSWNELLLFA 599
E P A L I +++ A + W + + +D++ L+K ++ L +F
Sbjct: 208 EIGYEPFRMARTEELGVIAHRRAIAAVDWVDSLTEIADAVDTEDKVALVKSCYSPLTIFN 267
Query: 598 IAWRSMEFLNDERENVDSRNTAPPQLICLMPGMTLQRNSALQAGVGQ-----IFDRVLSE 434
+ R+ ++NT P ++CL + R + + DR L+E
Sbjct: 268 FSART------------AQNTKNPDILCLCSHSFVPRRLPPEFNETNHLSNFLIDRTLNE 315
Query: 433 LSLKMRSLRMDQAEYVALKAIILLNPDVKGLKN--KQEVDVLREKM 302
L +R L + + E V LKAII+LNP+ KGL + + LR+K+
Sbjct: 316 LVAPLRKLNLKEEEIVPLKAIIILNPNAKGLSEHARHAISELRDKV 361
>U41559-6|AAC24263.1| 583|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 31, isoform a protein.
Length = 583
Score = 55.2 bits (127), Expect = 5e-08
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 8/166 (4%)
Frame = -3
Query: 775 EAACRPXXXAPVSSLCQIGNKQIAALIVWARDIPHFGQX-EIDDQILLIKGSWNELLLFA 599
E P A L I +++ A + W + + +D++ L+K ++ L +F
Sbjct: 247 EIGYEPFRMARTEELGVIAHRRAIAAVDWVDSLTEIADAVDTEDKVALVKSCYSPLTIFN 306
Query: 598 IAWRSMEFLNDERENVDSRNTAPPQLICLMPGMTLQRNSALQAGVGQ-----IFDRVLSE 434
+ R+ ++NT P ++CL + R + + DR L+E
Sbjct: 307 FSART------------AQNTKNPDILCLCSHSFVPRRLPPEFNETNHLSNFLIDRTLNE 354
Query: 433 LSLKMRSLRMDQAEYVALKAIILLNPDVKGLKN--KQEVDVLREKM 302
L +R L + + E V LKAII+LNP+ KGL + + LR+K+
Sbjct: 355 LVAPLRKLNLKEEEIVPLKAIIILNPNAKGLSEHARHAISELRDKV 400
>AF273779-1|AAG15128.1| 565|Caenorhabditis elegans nuclear receptor
NHR-31 protein.
Length = 565
Score = 55.2 bits (127), Expect = 5e-08
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 8/166 (4%)
Frame = -3
Query: 775 EAACRPXXXAPVSSLCQIGNKQIAALIVWARDIPHFGQX-EIDDQILLIKGSWNELLLFA 599
E P A L I +++ A + W + + +D++ L+K ++ L +F
Sbjct: 229 EIGYEPFRMARTEELGVIAHRRAIAAVDWVDSLTEIADAVDTEDKVALVKSCYSPLTIFN 288
Query: 598 IAWRSMEFLNDERENVDSRNTAPPQLICLMPGMTLQRNSALQAGVGQ-----IFDRVLSE 434
+ R+ ++NT P ++CL + R + + DR L+E
Sbjct: 289 FSART------------AQNTKNPDILCLCSHSFVPRRLPPEFNETNHLSNFLIDRTLNE 336
Query: 433 LSLKMRSLRMDQAEYVALKAIILLNPDVKGLKN--KQEVDVLREKM 302
L +R L + + E V LKAII+LNP+ KGL + + LR+K+
Sbjct: 337 LVAPLRKLNLKEEEIVPLKAIIILNPNAKGLSEHARHAISELRDKV 382
>AF273778-1|AAG15127.1| 595|Caenorhabditis elegans nuclear receptor
NHR-31 protein.
Length = 595
Score = 55.2 bits (127), Expect = 5e-08
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 8/166 (4%)
Frame = -3
Query: 775 EAACRPXXXAPVSSLCQIGNKQIAALIVWARDIPHFGQX-EIDDQILLIKGSWNELLLFA 599
E P A L I +++ A + W + + +D++ L+K ++ L +F
Sbjct: 259 EIGYEPFRMARTEELGVIAHRRAIAAVDWVDSLTEIADAVDTEDKVALVKSCYSPLTIFN 318
Query: 598 IAWRSMEFLNDERENVDSRNTAPPQLICLMPGMTLQRNSALQAGVGQ-----IFDRVLSE 434
+ R+ ++NT P ++CL + R + + DR L+E
Sbjct: 319 FSART------------AQNTKNPDILCLCSHSFVPRRLPPEFNETNHLSNFLIDRTLNE 366
Query: 433 LSLKMRSLRMDQAEYVALKAIILLNPDVKGLKN--KQEVDVLREKM 302
L +R L + + E V LKAII+LNP+ KGL + + LR+K+
Sbjct: 367 LVAPLRKLNLKEEEIVPLKAIIILNPNAKGLSEHARHAISELRDKV 412
>AF273777-1|AAG15126.1| 421|Caenorhabditis elegans nuclear receptor
NHR-31 protein.
Length = 421
Score = 55.2 bits (127), Expect = 5e-08
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 8/166 (4%)
Frame = -3
Query: 775 EAACRPXXXAPVSSLCQIGNKQIAALIVWARDIPHFGQX-EIDDQILLIKGSWNELLLFA 599
E P A L I +++ A + W + + +D++ L+K ++ L +F
Sbjct: 85 EIGYEPFRMARTEELGVIAHRRAIAAVDWVDSLTEIADAVDTEDKVALVKSCYSPLTIFN 144
Query: 598 IAWRSMEFLNDERENVDSRNTAPPQLICLMPGMTLQRNSALQAGVGQ-----IFDRVLSE 434
+ R+ ++NT P ++CL + R + + DR L+E
Sbjct: 145 FSART------------AQNTKNPDILCLCSHSFVPRRLPPEFNETNHLSNFLIDRTLNE 192
Query: 433 LSLKMRSLRMDQAEYVALKAIILLNPDVKGLKN--KQEVDVLREKM 302
L +R L + + E V LKAII+LNP+ KGL + + LR+K+
Sbjct: 193 LVAPLRKLNLKEEEIVPLKAIIILNPNAKGLSEHARHAISELRDKV 238
>AF273776-1|AAG15125.1| 583|Caenorhabditis elegans nuclear receptor
NHR-31 protein.
Length = 583
Score = 55.2 bits (127), Expect = 5e-08
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 8/166 (4%)
Frame = -3
Query: 775 EAACRPXXXAPVSSLCQIGNKQIAALIVWARDIPHFGQX-EIDDQILLIKGSWNELLLFA 599
E P A L I +++ A + W + + +D++ L+K ++ L +F
Sbjct: 247 EIGYEPFRMARTEELGVIAHRRAIAAVDWVDSLTEIADAVDTEDKVALVKSCYSPLTIFN 306
Query: 598 IAWRSMEFLNDERENVDSRNTAPPQLICLMPGMTLQRNSALQAGVGQ-----IFDRVLSE 434
+ R+ ++NT P ++CL + R + + DR L+E
Sbjct: 307 FSART------------AQNTKNPDILCLCSHSFVPRRLPPEFNETNHLSNFLIDRTLNE 354
Query: 433 LSLKMRSLRMDQAEYVALKAIILLNPDVKGLKN--KQEVDVLREKM 302
L +R L + + E V LKAII+LNP+ KGL + + LR+K+
Sbjct: 355 LVAPLRKLNLKEEEIVPLKAIIILNPNAKGLSEHARHAISELRDKV 400
>Z83235-5|CAD21653.1| 476|Caenorhabditis elegans Hypothetical
protein K10C3.6b protein.
Length = 476
Score = 52.4 bits (120), Expect = 3e-07
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 6/152 (3%)
Frame = -3
Query: 760 PXXXAPVSSLCQIGNKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSM 581
P L +I + ++ WA+ I F ++D+I+L+K + L+ A+RS
Sbjct: 190 PNRPCTTEDLNEISRTTLLLMVEWAKTINPFMDLSMEDKIILLKNYAPQHLILMPAFRSP 249
Query: 580 EFLNDERENVDSRNTAPPQLICLMPG--MTLQRNSALQA----GVGQIFDRVLSELSLKM 419
+ +CL MT N+ L I RVL E+ M
Sbjct: 250 DTTR----------------VCLFNNTYMTRDNNTDLNGFAAFKTSNITPRVLDEIVWPM 293
Query: 418 RSLRMDQAEYVALKAIILLNPDVKGLKNKQEV 323
R L+M + E+V LKA+ L+P+ KGL N ++
Sbjct: 294 RQLQMREQEFVCLKALAFLHPEAKGLSNSSQI 325
>AF273795-1|AAG15143.1| 475|Caenorhabditis elegans nuclear receptor
NHR-49 protein.
Length = 475
Score = 52.4 bits (120), Expect = 3e-07
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 6/152 (3%)
Frame = -3
Query: 760 PXXXAPVSSLCQIGNKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSM 581
P L +I + ++ WA+ I F ++D+I+L+K + L+ A+RS
Sbjct: 189 PNRPCTTEDLNEISRTTLLLMVEWAKTINPFMDLSMEDKIILLKNYAPQHLILMPAFRSP 248
Query: 580 EFLNDERENVDSRNTAPPQLICLMPG--MTLQRNSALQA----GVGQIFDRVLSELSLKM 419
+ +CL MT N+ L I RVL E+ M
Sbjct: 249 DTTR----------------VCLFNNTYMTRDNNTDLNGFAAFKTSNITPRVLDEIVWPM 292
Query: 418 RSLRMDQAEYVALKAIILLNPDVKGLKNKQEV 323
R L+M + E+V LKA+ L+P+ KGL N ++
Sbjct: 293 RQLQMREQEFVCLKALAFLHPEAKGLSNSSQI 324
>Z83235-7|CAD57703.1| 486|Caenorhabditis elegans Hypothetical
protein K10C3.6d protein.
Length = 486
Score = 51.2 bits (117), Expect = 8e-07
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Frame = -3
Query: 733 LCQIGNKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLNDEREN 554
L +I + ++ WA+ I F ++D+I+L+K + L+ A+RS +
Sbjct: 209 LNEISRTTLLLMVEWAKTINPFMDLSMEDKIILLKNYAPQHLILMPAFRSPDTTR----- 263
Query: 553 VDSRNTAPPQLICLMPG--MTLQRNSALQA----GVGQIFDRVLSELSLKMRSLRMDQAE 392
+CL MT N+ L I RVL E+ MR L+M + E
Sbjct: 264 -----------VCLFNNTYMTRDNNTDLNGFAAFKTSNITPRVLDEIVWPMRQLQMREQE 312
Query: 391 YVALKAIILLNPDVKGLKNKQEV 323
+V LKA+ L+P+ KGL N ++
Sbjct: 313 FVCLKALAFLHPEAKGLSNSSQI 335
>Z83235-6|CAD57702.1| 501|Caenorhabditis elegans Hypothetical
protein K10C3.6c protein.
Length = 501
Score = 51.2 bits (117), Expect = 8e-07
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Frame = -3
Query: 733 LCQIGNKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLNDEREN 554
L +I + ++ WA+ I F ++D+I+L+K + L+ A+RS +
Sbjct: 224 LNEISRTTLLLMVEWAKTINPFMDLSMEDKIILLKNYAPQHLILMPAFRSPDTTR----- 278
Query: 553 VDSRNTAPPQLICLMPG--MTLQRNSALQA----GVGQIFDRVLSELSLKMRSLRMDQAE 392
+CL MT N+ L I RVL E+ MR L+M + E
Sbjct: 279 -----------VCLFNNTYMTRDNNTDLNGFAAFKTSNITPRVLDEIVWPMRQLQMREQE 327
Query: 391 YVALKAIILLNPDVKGLKNKQEV 323
+V LKA+ L+P+ KGL N ++
Sbjct: 328 FVCLKALAFLHPEAKGLSNSSQI 350
>Z83235-4|CAB05772.1| 477|Caenorhabditis elegans Hypothetical
protein K10C3.6a protein.
Length = 477
Score = 51.2 bits (117), Expect = 8e-07
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Frame = -3
Query: 733 LCQIGNKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLNDEREN 554
L +I + ++ WA+ I F ++D+I+L+K + L+ A+RS +
Sbjct: 200 LNEISRTTLLLMVEWAKTINPFMDLSMEDKIILLKNYAPQHLILMPAFRSPDTTR----- 254
Query: 553 VDSRNTAPPQLICLMPG--MTLQRNSALQA----GVGQIFDRVLSELSLKMRSLRMDQAE 392
+CL MT N+ L I RVL E+ MR L+M + E
Sbjct: 255 -----------VCLFNNTYMTRDNNTDLNGFAAFKTSNITPRVLDEIVWPMRQLQMREQE 303
Query: 391 YVALKAIILLNPDVKGLKNKQEV 323
+V LKA+ L+P+ KGL N ++
Sbjct: 304 FVCLKALAFLHPEAKGLSNSSQI 326
>AY204174-1|AAO39178.1| 344|Caenorhabditis elegans nuclear receptor
NHR-64 protein.
Length = 344
Score = 51.2 bits (117), Expect = 8e-07
Identities = 35/150 (23%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Frame = -3
Query: 718 NKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLNDERENVDSRN 539
N+Q+ ++ WA+ + F + + Q+ L++ + L+ A+RS+ L+D
Sbjct: 138 NQQLTLMVEWAKVLEGFQRVDNITQVALLRHFSAQHLVMCAAFRSIH-LSDA-------- 188
Query: 538 TAPPQLICLMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLN 359
+ L L ++S + ++ +R++ +++ MRSL M++ EY+ALKAI +
Sbjct: 189 ------VWLTNETCLHKDSPKIPDMNRVAERIIDQVTNPMRSLHMNEIEYIALKAIAFFD 242
Query: 358 PDVKGLKNK--QEVDVLREKMFLCLDEYCR 275
P KG+ ++ +V+ +R+++ + + R
Sbjct: 243 PLAKGITSESYSDVEEMRQRILESFERHVR 272
>AY204173-1|AAO39177.1| 369|Caenorhabditis elegans nuclear receptor
NHR-64 protein.
Length = 369
Score = 51.2 bits (117), Expect = 8e-07
Identities = 35/150 (23%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Frame = -3
Query: 718 NKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLNDERENVDSRN 539
N+Q+ ++ WA+ + F + + Q+ L++ + L+ A+RS+ L+D
Sbjct: 163 NQQLTLMVEWAKVLEGFQRVDNITQVALLRHFSAQHLVMCAAFRSIH-LSDA-------- 213
Query: 538 TAPPQLICLMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLN 359
+ L L ++S + ++ +R++ +++ MRSL M++ EY+ALKAI +
Sbjct: 214 ------VWLTNETCLHKDSPKIPDMNRVAERIIDQVTNPMRSLHMNEIEYIALKAIAFFD 267
Query: 358 PDVKGLKNK--QEVDVLREKMFLCLDEYCR 275
P KG+ ++ +V+ +R+++ + + R
Sbjct: 268 PLAKGITSESYSDVEEMRQRILESFERHVR 297
>AY204172-1|AAO39176.1| 234|Caenorhabditis elegans nuclear receptor
NHR-64 protein.
Length = 234
Score = 51.2 bits (117), Expect = 8e-07
Identities = 35/150 (23%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Frame = -3
Query: 718 NKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLNDERENVDSRN 539
N+Q+ ++ WA+ + F + + Q+ L++ + L+ A+RS+ L+D
Sbjct: 28 NQQLTLMVEWAKVLEGFQRVDNITQVALLRHFSAQHLVMCAAFRSIH-LSDA-------- 78
Query: 538 TAPPQLICLMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLN 359
+ L L ++S + ++ +R++ +++ MRSL M++ EY+ALKAI +
Sbjct: 79 ------VWLTNETCLHKDSPKIPDMNRVAERIIDQVTNPMRSLHMNEIEYIALKAIAFFD 132
Query: 358 PDVKGLKNK--QEVDVLREKMFLCLDEYCR 275
P KG+ ++ +V+ +R+++ + + R
Sbjct: 133 PLAKGITSESYSDVEEMRQRILESFERHVR 162
>AF332206-1|AAK17977.1| 381|Caenorhabditis elegans nuclear receptor
NHR-49 protein.
Length = 381
Score = 51.2 bits (117), Expect = 8e-07
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Frame = -3
Query: 733 LCQIGNKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLNDEREN 554
L +I + ++ WA+ I F ++D+I+L+K + L+ A+RS +
Sbjct: 194 LNEISRTTLLLMVEWAKTINPFMDLSMEDKIILLKNYAPQHLILMPAFRSPDTTR----- 248
Query: 553 VDSRNTAPPQLICLMPG--MTLQRNSALQA----GVGQIFDRVLSELSLKMRSLRMDQAE 392
+CL MT N+ L I RVL E+ MR L+M + E
Sbjct: 249 -----------VCLFNNTYMTRDNNTDLNGFAAFKTSNITPRVLDEIVWPMRQLQMREQE 297
Query: 391 YVALKAIILLNPDVKGLKNKQEV 323
+V LKA+ L+P+ KGL N ++
Sbjct: 298 FVCLKALAFLHPEAKGLSNSSQI 320
>AF273793-1|AAG15141.1| 474|Caenorhabditis elegans nuclear receptor
NHR-49 protein.
Length = 474
Score = 51.2 bits (117), Expect = 8e-07
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Frame = -3
Query: 733 LCQIGNKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLNDEREN 554
L +I + ++ WA+ I F ++D+I+L+K + L+ A+RS +
Sbjct: 197 LNEISRTTLLLMVEWAKTINPFMDLSMEDKIILLKNYAPQHLILMPAFRSPDTTR----- 251
Query: 553 VDSRNTAPPQLICLMPG--MTLQRNSALQA----GVGQIFDRVLSELSLKMRSLRMDQAE 392
+CL MT N+ L I RVL E+ MR L+M + E
Sbjct: 252 -----------VCLFNNTYMTRDNNTDLNGFAAFKTSNITPRVLDEIVWPMRQLQMREQE 300
Query: 391 YVALKAIILLNPDVKGLKNKQEV 323
+V LKA+ L+P+ KGL N ++
Sbjct: 301 FVCLKALAFLHPEAKGLSNSSQI 323
>AF273792-1|AAG15140.1| 337|Caenorhabditis elegans nuclear receptor
NHR-49 protein.
Length = 337
Score = 51.2 bits (117), Expect = 8e-07
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Frame = -3
Query: 733 LCQIGNKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLNDEREN 554
L +I + ++ WA+ I F ++D+I+L+K + L+ A+RS +
Sbjct: 60 LNEISRTTLLLMVEWAKTINPFMDLSMEDKIILLKNYAPQHLILMPAFRSPDTTR----- 114
Query: 553 VDSRNTAPPQLICLMPG--MTLQRNSALQA----GVGQIFDRVLSELSLKMRSLRMDQAE 392
+CL MT N+ L I RVL E+ MR L+M + E
Sbjct: 115 -----------VCLFNNTYMTRDNNTDLNGFAAFKTSNITPRVLDEIVWPMRQLQMREQE 163
Query: 391 YVALKAIILLNPDVKGLKNKQEV 323
+V LKA+ L+P+ KGL N ++
Sbjct: 164 FVCLKALAFLHPEAKGLSNSSQI 186
>AF043694-2|AAT27251.1| 387|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 64, isoform b protein.
Length = 387
Score = 51.2 bits (117), Expect = 8e-07
Identities = 35/150 (23%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Frame = -3
Query: 718 NKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLNDERENVDSRN 539
N+Q+ ++ WA+ + F + + Q+ L++ + L+ A+RS+ L+D
Sbjct: 181 NQQLTLMVEWAKVLEGFQRVDNITQVALLRHFSAQHLVMCAAFRSIH-LSDA-------- 231
Query: 538 TAPPQLICLMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLN 359
+ L L ++S + ++ +R++ +++ MRSL M++ EY+ALKAI +
Sbjct: 232 ------VWLTNETCLHKDSPKIPDMNRVAERIIDQVTNPMRSLHMNEIEYIALKAIAFFD 285
Query: 358 PDVKGLKNK--QEVDVLREKMFLCLDEYCR 275
P KG+ ++ +V+ +R+++ + + R
Sbjct: 286 PLAKGITSESYSDVEEMRQRILESFERHVR 315
>AF043694-1|AAC24283.1| 412|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 64, isoform a protein.
Length = 412
Score = 51.2 bits (117), Expect = 8e-07
Identities = 35/150 (23%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Frame = -3
Query: 718 NKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLNDERENVDSRN 539
N+Q+ ++ WA+ + F + + Q+ L++ + L+ A+RS+ L+D
Sbjct: 206 NQQLTLMVEWAKVLEGFQRVDNITQVALLRHFSAQHLVMCAAFRSIH-LSDA-------- 256
Query: 538 TAPPQLICLMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLN 359
+ L L ++S + ++ +R++ +++ MRSL M++ EY+ALKAI +
Sbjct: 257 ------VWLTNETCLHKDSPKIPDMNRVAERIIDQVTNPMRSLHMNEIEYIALKAIAFFD 310
Query: 358 PDVKGLKNK--QEVDVLREKMFLCLDEYCR 275
P KG+ ++ +V+ +R+++ + + R
Sbjct: 311 PLAKGITSESYSDVEEMRQRILESFERHVR 340
>EF601082-1|ABQ96204.1| 370|Caenorhabditis elegans UNC-55a isoform
protein.
Length = 370
Score = 49.2 bits (112), Expect = 3e-06
Identities = 35/164 (21%), Positives = 72/164 (43%), Gaps = 4/164 (2%)
Frame = -3
Query: 736 SLCQIGNKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLNDERE 557
S+ + + I A + WAR DQ++L++ SW + +FA+A +
Sbjct: 149 SIFEFAAQTIFATVNWART--SMSNLVKGDQLILLRHSWTPIFIFALAQSNFALNLSTHL 206
Query: 556 NVDSRNTAPPQLICLMPGMTLQRNSALQAGVGQIFD----RVLSELSLKMRSLRMDQAEY 389
+ A + G + + ++FD + K+R +D E
Sbjct: 207 TAVTATAASTENGSSSLGSKSEDEEKSEEKPERVFDEPQFQGFQAKIDKIRDFHLDVVES 266
Query: 388 VALKAIILLNPDVKGLKNKQEVDVLREKMFLCLDEYCRRSRGGE 257
+L+A++L + D + L+ K +++ + EK+ +DEYC+ ++ E
Sbjct: 267 SSLRAVLLFSCDEEALEEKGKIEEIVEKLKSAVDEYCKMNKRSE 310
>EF601077-1|ABQ96199.1| 357|Caenorhabditis elegans UNC-55b isoform
protein.
Length = 357
Score = 49.2 bits (112), Expect = 3e-06
Identities = 35/164 (21%), Positives = 72/164 (43%), Gaps = 4/164 (2%)
Frame = -3
Query: 736 SLCQIGNKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLNDERE 557
S+ + + I A + WAR DQ++L++ SW + +FA+A +
Sbjct: 136 SIFEFAAQTIFATVNWART--SMSNLVKGDQLILLRHSWTPIFIFALAQSNFALNLSTHL 193
Query: 556 NVDSRNTAPPQLICLMPGMTLQRNSALQAGVGQIFD----RVLSELSLKMRSLRMDQAEY 389
+ A + G + + ++FD + K+R +D E
Sbjct: 194 TAVTATAASTENGSSSLGSKSEDEEKSEEKPERVFDEPQFQGFQAKIDKIRDFHLDVVES 253
Query: 388 VALKAIILLNPDVKGLKNKQEVDVLREKMFLCLDEYCRRSRGGE 257
+L+A++L + D + L+ K +++ + EK+ +DEYC+ ++ E
Sbjct: 254 SSLRAVLLFSCDEEALEEKGKIEEIVEKLKSAVDEYCKMNKRSE 297
>U97551-2|AAP13776.1| 434|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 14, isoform b protein.
Length = 434
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = -3
Query: 448 RVLSELSLKMRSLRMDQAEYVALKAIILLNPDVKGLKN--KQEVDVLREKMFLCLDEY 281
R++ EL +R LR D AE+ LKA++LLNPDV G+ N ++ + R+ + L Y
Sbjct: 241 RIIDELLTPLRRLRTDHAEFSCLKALLLLNPDVVGISNNTRERIREARDALLKTLFAY 298
>U97551-1|AAP13775.1| 435|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 14, isoform a protein.
Length = 435
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = -3
Query: 448 RVLSELSLKMRSLRMDQAEYVALKAIILLNPDVKGLKN--KQEVDVLREKMFLCLDEY 281
R++ EL +R LR D AE+ LKA++LLNPDV G+ N ++ + R+ + L Y
Sbjct: 241 RIIDELLTPLRRLRTDHAEFSCLKALLLLNPDVVGISNNTRERIREARDALLKTLFAY 298
>AF083229-1|AAD03687.1| 288|Caenorhabditis elegans nuclear receptor
NHR-14 protein.
Length = 288
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = -3
Query: 448 RVLSELSLKMRSLRMDQAEYVALKAIILLNPDVKGLKN--KQEVDVLREKMFLCLDEY 281
R++ EL +R LR D AE+ LKA++LLNPDV G+ N ++ + R+ + L Y
Sbjct: 94 RIIDELLTPLRRLRTDHAEFSCLKALLLLNPDVVGISNNTRERIREARDALLKTLFAY 151
>Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical
protein C28D4.1 protein.
Length = 437
Score = 44.0 bits (99), Expect = 1e-04
Identities = 44/151 (29%), Positives = 65/151 (43%), Gaps = 5/151 (3%)
Frame = -3
Query: 697 IVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLNDERENVDS----RNTAP 530
I W +P + DD+ LL+K S + A++S E+ D VD R+
Sbjct: 218 IDWFETLPEYRALIDDDKELLVKFSLMPVGWLWYAYKSYEYRCDGIVFVDGSWFPRDKTI 277
Query: 529 PQLICLMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLNPDV 350
Q +C P L G+I + ++++ M+ L MD+ E V LKAI L PD
Sbjct: 278 QQQVC--PTCVLY--------YGRITESFMADVVNSMKELEMDETEMVLLKAICHLQPDY 327
Query: 349 KGLKNKQEV-DVLREKMFLCLDEYCRRSRGG 260
+ + +V REK L EY R G
Sbjct: 328 RLTRRGNDVISTGREKYKRALCEYIRMKSNG 358
>AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear receptor
NHR-100 protein.
Length = 437
Score = 44.0 bits (99), Expect = 1e-04
Identities = 44/151 (29%), Positives = 65/151 (43%), Gaps = 5/151 (3%)
Frame = -3
Query: 697 IVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLNDERENVDS----RNTAP 530
I W +P + DD+ LL+K S + A++S E+ D VD R+
Sbjct: 218 IDWFETLPEYRALIDDDKELLVKFSLMPVGWLWYAYKSYEYRCDGIVFVDGSWFPRDKTI 277
Query: 529 PQLICLMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLNPDV 350
Q +C P L G+I + ++++ M+ L MD+ E V LKAI L PD
Sbjct: 278 QQQVC--PTCVLY--------YGRITESFMADVVNSMKELEMDETEMVLLKAICHLQPDY 327
Query: 349 KGLKNKQEV-DVLREKMFLCLDEYCRRSRGG 260
+ + +V REK L EY R G
Sbjct: 328 RLTRRGNDVISTGREKYKRALCEYIRMKSNG 358
>AY204184-1|AAO39188.1| 353|Caenorhabditis elegans nuclear receptor
NHR-100 protein.
Length = 353
Score = 44.0 bits (99), Expect = 1e-04
Identities = 44/151 (29%), Positives = 65/151 (43%), Gaps = 5/151 (3%)
Frame = -3
Query: 697 IVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLNDERENVDS----RNTAP 530
I W +P + DD+ LL+K S + A++S E+ D VD R+
Sbjct: 134 IDWFETLPEYRALIDDDKELLVKFSLMPVGWLWYAYKSYEYRCDGIVFVDGSWFPRDKTI 193
Query: 529 PQLICLMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLNPDV 350
Q +C P L G+I + ++++ M+ L MD+ E V LKAI L PD
Sbjct: 194 QQQVC--PTCVLY--------YGRITESFMADVVNSMKELEMDETEMVLLKAICHLQPDY 243
Query: 349 KGLKNKQEV-DVLREKMFLCLDEYCRRSRGG 260
+ + +V REK L EY R G
Sbjct: 244 RLTRRGNDVISTGREKYKRALCEYIRMKSNG 274
>AF016443-2|AAC24272.1| 359|Caenorhabditis elegans Hypothetical
protein C17E7.6 protein.
Length = 359
Score = 39.1 bits (87), Expect = 0.003
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Frame = -3
Query: 649 DQILLIKGSWNELLLFAIAWRSMEFLNDERENVDSRNTAPPQLICLMPGMTLQRNSALQA 470
D+++L++ S ++ L A R+ D VD ++ P ++ L+ Q
Sbjct: 188 DKLILLRHSASKCALLGGAMRTYLDKKDRMTTVDGQDIYPKEMRALL---------GFQQ 238
Query: 469 GVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLNPDV---KGLKNKQEVDVLREKMF 299
G Q DRV S L K+ L + E + + AII +P V + N Q++ +++ F
Sbjct: 239 GADQFLDRVRSLLISKLAELDVTTEECILISAIIFCDPAVFYDQDNPNAQQIVSAQQQNF 298
Query: 298 L-CLDEYC 278
L +YC
Sbjct: 299 TSALSQYC 306
>U46670-2|AAC48174.4| 440|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 1, isoform c protein.
Length = 440
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = -3
Query: 529 PQLICLMPGMTLQRNSALQ---AGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLN 359
P I G + R Q +G I+ R + E+ + R L++ AE+ KA + N
Sbjct: 295 PDKIVFQNGAFIMRQPQQQVQLSGCRPIYTRQMDEIMIPFRKLQLSVAEFATFKAALFFN 354
Query: 358 PDVKGLKNKQEVDVLREK 305
PD L + + +V E+
Sbjct: 355 PDALDLSPQAKQEVFEER 372
>U46670-1|AAP46277.1| 445|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 1, isoform a protein.
Length = 445
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = -3
Query: 529 PQLICLMPGMTLQRNSALQ---AGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLN 359
P I G + R Q +G I+ R + E+ + R L++ AE+ KA + N
Sbjct: 300 PDKIVFQNGAFIMRQPQQQVQLSGCRPIYTRQMDEIMIPFRKLQLSVAEFATFKAALFFN 359
Query: 358 PDVKGLKNKQEVDVLREK 305
PD L + + +V E+
Sbjct: 360 PDALDLSPQAKQEVFEER 377
>AY204166-1|AAO39170.1| 436|Caenorhabditis elegans nuclear receptor
NHR-1 protein.
Length = 436
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = -3
Query: 529 PQLICLMPGMTLQRNSALQ---AGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLN 359
P I G + R Q +G I+ R + E+ + R L++ AE+ KA + N
Sbjct: 291 PDKIVFQNGAFIMRQPQQQVQLSGCRPIYTRQMDEIMIPFRKLQLSVAEFATFKAALFFN 350
Query: 358 PDVKGLKNKQEVDVLREK 305
PD L + + +V E+
Sbjct: 351 PDALDLSPQAKQEVFEER 368
>AY204165-1|AAO39169.1| 445|Caenorhabditis elegans nuclear receptor
NHR-1 protein.
Length = 445
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = -3
Query: 529 PQLICLMPGMTLQRNSALQ---AGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLN 359
P I G + R Q +G I+ R + E+ + R L++ AE+ KA + N
Sbjct: 300 PDKIVFQNGAFIMRQPQQQVQLSGCRPIYTRQMDEIMIPFRKLQLSVAEFATFKAALFFN 359
Query: 358 PDVKGLKNKQEVDVLREK 305
PD L + + +V E+
Sbjct: 360 PDALDLSPQAKQEVFEER 377
>AY204164-1|AAO39168.1| 440|Caenorhabditis elegans nuclear receptor
NHR-1 protein.
Length = 440
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = -3
Query: 529 PQLICLMPGMTLQRNSALQ---AGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLN 359
P I G + R Q +G I+ R + E+ + R L++ AE+ KA + N
Sbjct: 295 PDKIVFQNGAFIMRQPQQQVQLSGCRPIYTRQMDEIMIPFRKLQLSVAEFATFKAALFFN 354
Query: 358 PDVKGLKNKQEVDVLREK 305
PD L + + +V E+
Sbjct: 355 PDALDLSPQAKQEVFEER 372
>AY204163-1|AAO39167.1| 440|Caenorhabditis elegans nuclear receptor
NHR-1 protein.
Length = 440
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = -3
Query: 529 PQLICLMPGMTLQRNSALQ---AGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLN 359
P I G + R Q +G I+ R + E+ + R L++ AE+ KA + N
Sbjct: 295 PDKIVFQNGAFIMRQPQQQVQLSGCRPIYTRQMDEIMIPFRKLQLSVAEFATFKAALFFN 354
Query: 358 PDVKGLKNKQEVDVLREK 305
PD L + + +V E+
Sbjct: 355 PDALDLSPQAKQEVFEER 372
>U10438-5|AAA19086.1| 395|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 10 protein.
Length = 395
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = -3
Query: 448 RVLSELSLKMRSLRMDQAEYVALKAIILLNPDVKGLKN--KQEVDVLREKMFLCLDEYCR 275
++L +L MRS+ +D E+ A KAI LNPD + + K+ + R + L Y
Sbjct: 278 QMLDQLLKPMRSMEIDMTEFAAFKAIFFLNPDADDVDSNAKKTLSDGRSAITNALYRYMV 337
Query: 274 RSRGGEE 254
+ +G E+
Sbjct: 338 KKKGAED 344
>AY204168-1|AAO39172.1| 395|Caenorhabditis elegans nuclear receptor
NHR-10 protein.
Length = 395
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = -3
Query: 448 RVLSELSLKMRSLRMDQAEYVALKAIILLNPDVKGLKN--KQEVDVLREKMFLCLDEYCR 275
++L +L MRS+ +D E+ A KAI LNPD + + K+ + R + L Y
Sbjct: 278 QMLDQLLKPMRSMEIDMTEFAAFKAIFFLNPDADDVDSNAKKTLSDGRSAITNALYRYMV 337
Query: 274 RSRGGEE 254
+ +G E+
Sbjct: 338 KKKGAED 344
>Z82259-10|CAD36480.1| 439|Caenorhabditis elegans Hypothetical
protein H27C11.1a protein.
Length = 439
Score = 37.5 bits (83), Expect = 0.011
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 4/152 (2%)
Frame = -3
Query: 733 LCQIGNKQIAALIV-WARDIPHFGQXE-IDDQILLIKGSWNELLLFAIAWRSMEFLNDER 560
LC +++ + W R +D+I L++ S L+L + +S +D +
Sbjct: 207 LCYDSERRLVTWAIDWCRQTAEIADVHHTNDKISLLRASCAPLVLLELGCQSSFGPSDTQ 266
Query: 559 ENVDSRNTAPPQLICLMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVAL 380
+ N + C+ P + R +Q+ + + R L L L+ + E V L
Sbjct: 267 --IPFCNNSFLSAHCIPPSTSFLRWKTIQS-LNKWAQRELKPLCLRAK-------EIVLL 316
Query: 379 KAIILLNPDVKGLKNKQE--VDVLREKMFLCL 290
KA+I LNPD GL + E + +LRE++ L
Sbjct: 317 KALIALNPDANGLSSDAESSIRMLRERVHTAL 348
>AL022473-2|CAA18549.2| 439|Caenorhabditis elegans Hypothetical
protein H27C11.1a protein.
Length = 439
Score = 37.5 bits (83), Expect = 0.011
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 4/152 (2%)
Frame = -3
Query: 733 LCQIGNKQIAALIV-WARDIPHFGQXE-IDDQILLIKGSWNELLLFAIAWRSMEFLNDER 560
LC +++ + W R +D+I L++ S L+L + +S +D +
Sbjct: 207 LCYDSERRLVTWAIDWCRQTAEIADVHHTNDKISLLRASCAPLVLLELGCQSSFGPSDTQ 266
Query: 559 ENVDSRNTAPPQLICLMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVAL 380
+ N + C+ P + R +Q+ + + R L L L+ + E V L
Sbjct: 267 --IPFCNNSFLSAHCIPPSTSFLRWKTIQS-LNKWAQRELKPLCLRAK-------EIVLL 316
Query: 379 KAIILLNPDVKGLKNKQE--VDVLREKMFLCL 290
KA+I LNPD GL + E + +LRE++ L
Sbjct: 317 KALIALNPDANGLSSDAESSIRMLRERVHTAL 348
>AL022473-1|CAJ43448.1| 339|Caenorhabditis elegans Hypothetical
protein H27C11.1b protein.
Length = 339
Score = 37.5 bits (83), Expect = 0.011
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 4/152 (2%)
Frame = -3
Query: 733 LCQIGNKQIAALIV-WARDIPHFGQXE-IDDQILLIKGSWNELLLFAIAWRSMEFLNDER 560
LC +++ + W R +D+I L++ S L+L + +S +D +
Sbjct: 107 LCYDSERRLVTWAIDWCRQTAEIADVHHTNDKISLLRASCAPLVLLELGCQSSFGPSDTQ 166
Query: 559 ENVDSRNTAPPQLICLMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVAL 380
+ N + C+ P + R +Q+ + + R L L L+ + E V L
Sbjct: 167 --IPFCNNSFLSAHCIPPSTSFLRWKTIQS-LNKWAQRELKPLCLRAK-------EIVLL 216
Query: 379 KAIILLNPDVKGLKNKQE--VDVLREKMFLCL 290
KA+I LNPD GL + E + +LRE++ L
Sbjct: 217 KALIALNPDANGLSSDAESSIRMLRERVHTAL 248
>AF332211-1|AAK17982.1| 439|Caenorhabditis elegans nuclear receptor
NHR-97 protein.
Length = 439
Score = 37.5 bits (83), Expect = 0.011
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 4/152 (2%)
Frame = -3
Query: 733 LCQIGNKQIAALIV-WARDIPHFGQXE-IDDQILLIKGSWNELLLFAIAWRSMEFLNDER 560
LC +++ + W R +D+I L++ S L+L + +S +D +
Sbjct: 207 LCYDSERRLVTWAIDWCRQTAEIADVHHTNDKISLLRASCAPLVLLELGCQSSFGPSDTQ 266
Query: 559 ENVDSRNTAPPQLICLMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVAL 380
+ N + C+ P + R +Q+ + + R L L L+ + E V L
Sbjct: 267 --IPFCNNSFLSAHCIPPSTSFLRWKTIQS-LNKWAQRELKPLCLRAK-------EIVLL 316
Query: 379 KAIILLNPDVKGLKNKQE--VDVLREKMFLCL 290
KA+I LNPD GL + E + +LRE++ L
Sbjct: 317 KALIALNPDANGLSSDAESSIRMLRERVHTAL 348
>Z92825-8|CAB07316.2| 469|Caenorhabditis elegans Hypothetical
protein C13C4.2 protein.
Length = 469
Score = 35.1 bits (77), Expect = 0.056
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -3
Query: 409 RMDQAEYVALKAIILLNPDVKGLK--NKQEVDVLREKMFLCLDEYCRRSRGGEEG 251
++D+ EY+ KAI+L NP V GL N++ ++ R + L YC G +G
Sbjct: 358 KVDKIEYLLFKAIMLCNPAVPGLDSWNQEIIEKERNQYVKALLNYCLLQHGKLQG 412
>Z92825-1|CAB07313.1| 415|Caenorhabditis elegans Hypothetical
protein C13C4.1 protein.
Length = 415
Score = 35.1 bits (77), Expect = 0.056
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -3
Query: 406 MDQAEYVALKAIILLNPDVKGLKNKQEVDVLREKMFL--CLDEYCRRSRGGEEG 251
+D+ EY+ LKAI+L NP + L + RE+ CL YC G G
Sbjct: 306 VDKTEYILLKAIVLCNPAIIDLPYADSKHIQREREVYAQCLFRYCLLQHGTLHG 359
>Z75955-18|CAB00126.2| 469|Caenorhabditis elegans Hypothetical
protein C13C4.2 protein.
Length = 469
Score = 35.1 bits (77), Expect = 0.056
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -3
Query: 409 RMDQAEYVALKAIILLNPDVKGLK--NKQEVDVLREKMFLCLDEYCRRSRGGEEG 251
++D+ EY+ KAI+L NP V GL N++ ++ R + L YC G +G
Sbjct: 358 KVDKIEYLLFKAIMLCNPAVPGLDSWNQEIIEKERNQYVKALLNYCLLQHGKLQG 412
>AF273830-1|AAG15179.1| 598|Caenorhabditis elegans nuclear receptor
NHR-88 protein.
Length = 598
Score = 35.1 bits (77), Expect = 0.056
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = -3
Query: 523 LICLMPGMTLQRNSA---LQAG-VGQIF-DRVLSELSLKMRSLRMDQAEYVALKAIILLN 359
LICL T+ R A L VG F RV+ +L + L + E L A+I+L+
Sbjct: 283 LICLCNKSTINRQPARHLLDTNLVGNNFVGRVIDDLVFPTKKLALTNPEITILSALIILD 342
Query: 358 PDVKGLKNK 332
PD +GL +
Sbjct: 343 PDARGLSQE 351
>AC006671-1|AAF39914.2| 593|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 88, isoform a protein.
Length = 593
Score = 35.1 bits (77), Expect = 0.056
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = -3
Query: 523 LICLMPGMTLQRNSA---LQAG-VGQIF-DRVLSELSLKMRSLRMDQAEYVALKAIILLN 359
LICL T+ R A L VG F RV+ +L + L + E L A+I+L+
Sbjct: 278 LICLCNKSTINRQPARHLLDTNLVGNNFVGRVIDDLVFPTKKLALTNPEITILSALIILD 337
Query: 358 PDVKGLKNK 332
PD +GL +
Sbjct: 338 PDARGLSQE 346
>Z96048-5|CAB09422.1| 443|Caenorhabditis elegans Hypothetical
protein F57A10.5 protein.
Length = 443
Score = 34.7 bits (76), Expect = 0.075
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = -3
Query: 394 EYVALKAIILLNPDVKGL--KNKQEVDVLREKMFLCLDEYCRRSR 266
EY+ LKAI+L NP V L K+++ + + R K L YC RSR
Sbjct: 345 EYLLLKAIVLCNPAVPDLSAKSQEIISLERVKYADALFNYCLRSR 389
>AF273808-1|AAG15157.1| 442|Caenorhabditis elegans nuclear receptor
NHR-60 protein.
Length = 442
Score = 34.7 bits (76), Expect = 0.075
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = -3
Query: 394 EYVALKAIILLNPDVKGL--KNKQEVDVLREKMFLCLDEYCRRSR 266
EY+ LKAI+L NP V L K+++ + + R K L YC RSR
Sbjct: 344 EYLLLKAIVLCNPAVPDLSAKSQEIISLERVKYADALFNYCLRSR 388
>Z54270-7|CAE48496.1| 492|Caenorhabditis elegans Hypothetical
protein F11C1.6b protein.
Length = 492
Score = 34.3 bits (75), Expect = 0.099
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = -3
Query: 727 QIGNKQIAALIVWARDIPHFGQXEIDDQILLIKGSW 620
Q+ + + +++WA++ F + +DDQ++L++ SW
Sbjct: 274 QVAEENLKDIVIWAKNDQLFSKLSLDDQMILLQTSW 309
>Z54270-6|CAA91028.1| 572|Caenorhabditis elegans Hypothetical
protein F11C1.6a protein.
Length = 572
Score = 34.3 bits (75), Expect = 0.099
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = -3
Query: 727 QIGNKQIAALIVWARDIPHFGQXEIDDQILLIKGSW 620
Q+ + + +++WA++ F + +DDQ++L++ SW
Sbjct: 354 QVAEENLKDIVIWAKNDQLFSKLSLDDQMILLQTSW 389
>U50308-8|AAG24032.1| 562|Caenorhabditis elegans Hypothetical
protein F07C3.10 protein.
Length = 562
Score = 34.3 bits (75), Expect = 0.099
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 2/151 (1%)
Frame = -3
Query: 697 IVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLNDERENVDSRNTAPPQLI 518
I +A+ P F Q E +D+ILL K + + A+ FL+ P I
Sbjct: 248 IEYAKTFPFFQQLESNDKILLTKAT--TFMNLALTSNYSSFLSKMAV------LQMPDGI 299
Query: 517 CLMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLNPDVKGLK 338
C+ G Q +++ ++ R+++ L +R+L D+ EYV LKAIIL N V L
Sbjct: 300 CIS-GPVGQGEHEIRSFERRLSLRIMAPL---IRNL-FDRTEYVLLKAIILCNHAVTDLS 354
Query: 337 NKQEVDVLREKMFL--CLDEYCRRSRGGEEG 251
+ + RE+ L YC G G
Sbjct: 355 CAAQNILTRERHNFTGALLLYCLSRHGSHAG 385
>AF179215-1|AAF67039.1| 492|Caenorhabditis elegans NHR-25 beta
protein.
Length = 492
Score = 34.3 bits (75), Expect = 0.099
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = -3
Query: 727 QIGNKQIAALIVWARDIPHFGQXEIDDQILLIKGSW 620
Q+ + + +++WA++ F + +DDQ++L++ SW
Sbjct: 274 QVAEENLKDIVIWAKNDQLFSKLSLDDQMILLQTSW 309
>AF179214-1|AAF67038.1| 568|Caenorhabditis elegans NHR-25 alpha
protein.
Length = 568
Score = 34.3 bits (75), Expect = 0.099
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = -3
Query: 727 QIGNKQIAALIVWARDIPHFGQXEIDDQILLIKGSW 620
Q+ + + +++WA++ F + +DDQ++L++ SW
Sbjct: 350 QVAEENLKDIVIWAKNDQLFSKLSLDDQMILLQTSW 385
>Z50004-1|CAA90291.1| 396|Caenorhabditis elegans Hypothetical
protein C02B4.2 protein.
Length = 396
Score = 33.9 bits (74), Expect = 0.13
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 6/146 (4%)
Frame = -3
Query: 715 KQIAALIVWARDIPHFGQXEIDDQI-LLIKGSWNELLLFAIAWRSMEFLNDERENVDS-- 545
K + L+ WA+ F +DQ L I +++ L+L A A+ + E ND D
Sbjct: 190 KILTVLVEWAKSFEVFSHLIPEDQKRLFIHTAFSNLVL-AEAFHTPEKYNDRIVFPDGLC 248
Query: 544 --RNTAPPQLICLMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAI 371
RN A ++ S G+ V++++ + +R +R+ + EYV L+AI
Sbjct: 249 GFRNVAQ--------SVSTDGVSNKTFGLTPTVVAVINDVLVPIRRMRLTKVEYVLLQAI 300
Query: 370 ILLNPDVKGL-KNKQEVDVLREKMFL 296
I +PD L K+ ++ + K L
Sbjct: 301 IFFDPDCLSLTKHGSQLIAAKRKRLL 326
>U97008-1|AAB52310.1| 370|Caenorhabditis elegans Hypothetical
protein C03G6.10 protein.
Length = 370
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = -3
Query: 394 EYVALKAIILLNPDVKGLKNKQEVDVLREK-MFL-CLDEYCRRS 269
EY+ LKAI NP V L K + + RE+ F+ L +YC+RS
Sbjct: 273 EYILLKAICCCNPAVPNLSQKAQSTLARERGQFVSILFDYCQRS 316
>U40940-3|AAN39667.1| 455|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 40, isoform c protein.
Length = 455
Score = 33.9 bits (74), Expect = 0.13
Identities = 30/158 (18%), Positives = 71/158 (44%), Gaps = 5/158 (3%)
Frame = -3
Query: 715 KQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSM-EFLNDERENVDSRN 539
+ ++ ++ W + +P + ++D++ L+K L +A+ + EF D ++
Sbjct: 251 RDLSLMLEWGKCLPIMERLLLNDKLALMKAFAPIFPLIQLAFYTRNEFECDIVIKLEPDC 310
Query: 538 TAPP--QLICLMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIIL 365
T P + + G +++ + ++ ++ MR L++ ++ +V K ++
Sbjct: 311 TPKPIPERLNYPDGSFIEKGNKPANTWEEMHTMLIDGCYKMMRQLKIKESTFVLYKMLLF 370
Query: 364 LNPDVKGLKN--KQEVDVLREKMFLCLDEYCRRSRGGE 257
NPD GL + K+ ++ R ++ L Y RG E
Sbjct: 371 HNPDADGLSSLGKKTIENERMRLLTQLFSYLSTERGKE 408
>U40940-2|AAM69090.1| 434|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 40, isoform b protein.
Length = 434
Score = 33.9 bits (74), Expect = 0.13
Identities = 30/158 (18%), Positives = 71/158 (44%), Gaps = 5/158 (3%)
Frame = -3
Query: 715 KQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSM-EFLNDERENVDSRN 539
+ ++ ++ W + +P + ++D++ L+K L +A+ + EF D ++
Sbjct: 230 RDLSLMLEWGKCLPIMERLLLNDKLALMKAFAPIFPLIQLAFYTRNEFECDIVIKLEPDC 289
Query: 538 TAPP--QLICLMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIIL 365
T P + + G +++ + ++ ++ MR L++ ++ +V K ++
Sbjct: 290 TPKPIPERLNYPDGSFIEKGNKPANTWEEMHTMLIDGCYKMMRQLKIKESTFVLYKMLLF 349
Query: 364 LNPDVKGLKN--KQEVDVLREKMFLCLDEYCRRSRGGE 257
NPD GL + K+ ++ R ++ L Y RG E
Sbjct: 350 HNPDADGLSSLGKKTIENERMRLLTQLFSYLSTERGKE 387
>U40940-1|AAM69089.1| 439|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 40, isoform a protein.
Length = 439
Score = 33.9 bits (74), Expect = 0.13
Identities = 30/158 (18%), Positives = 71/158 (44%), Gaps = 5/158 (3%)
Frame = -3
Query: 715 KQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSM-EFLNDERENVDSRN 539
+ ++ ++ W + +P + ++D++ L+K L +A+ + EF D ++
Sbjct: 235 RDLSLMLEWGKCLPIMERLLLNDKLALMKAFAPIFPLIQLAFYTRNEFECDIVIKLEPDC 294
Query: 538 TAPP--QLICLMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIIL 365
T P + + G +++ + ++ ++ MR L++ ++ +V K ++
Sbjct: 295 TPKPIPERLNYPDGSFIEKGNKPANTWEEMHTMLIDGCYKMMRQLKIKESTFVLYKMLLF 354
Query: 364 LNPDVKGLKN--KQEVDVLREKMFLCLDEYCRRSRGGE 257
NPD GL + K+ ++ R ++ L Y RG E
Sbjct: 355 HNPDADGLSSLGKKTIENERMRLLTQLFSYLSTERGKE 392
>U40160-2|AAA81156.1| 547|Caenorhabditis elegans Hypothetical
protein C56E10.1 protein.
Length = 547
Score = 33.9 bits (74), Expect = 0.13
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 9/158 (5%)
Frame = -3
Query: 709 IAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLNDERENVDSRNTAP 530
I + +A+ Q +DQILL++ +L+ A+ S E D + D T P
Sbjct: 344 ILTSVEYAKTFMFLHQIGKEDQILLLRAVVLKLMHLNQAFYSYENKYDMIFHPDG--TVP 401
Query: 529 PQLICLMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSL---RMDQAEYVALKAIILLN 359
P +S Q Q + + E +L +R ++D+ EYV KAI L N
Sbjct: 402 PHS---WKKNENPNDSISQMMTKQKMEEMKEEFTLSIRQFVTYQLDKREYVLFKAITLCN 458
Query: 358 P----DVKGLKN--KQEVDVLREKMFLCLDEYCRRSRG 263
+ GL + ++ V +EK L +YC +RG
Sbjct: 459 ASKYFSISGLSDHAREVVTREKEKYSKALMKYCLANRG 496
>AF273782-1|AAG15131.1| 439|Caenorhabditis elegans nuclear receptor
NHR-40 protein.
Length = 439
Score = 33.9 bits (74), Expect = 0.13
Identities = 30/158 (18%), Positives = 71/158 (44%), Gaps = 5/158 (3%)
Frame = -3
Query: 715 KQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSM-EFLNDERENVDSRN 539
+ ++ ++ W + +P + ++D++ L+K L +A+ + EF D ++
Sbjct: 235 RDLSLMLEWGKCLPIMERLLLNDKLALMKAFAPIFPLIQLAFYTRNEFECDIVIKLEPDC 294
Query: 538 TAPP--QLICLMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIIL 365
T P + + G +++ + ++ ++ MR L++ ++ +V K ++
Sbjct: 295 TPKPIPERLNYPDGSFIEKGNKPANTWEEMHTMLIDGCYKMMRQLKIKESTFVLYKMLLF 354
Query: 364 LNPDVKGLKN--KQEVDVLREKMFLCLDEYCRRSRGGE 257
NPD GL + K+ ++ R ++ L Y RG E
Sbjct: 355 HNPDADGLSSLGKKTIENERMRLLTQLFSYLSTERGKE 392
>Z75955-10|CAB00124.2| 410|Caenorhabditis elegans Hypothetical
protein R07B7.15 protein.
Length = 410
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -3
Query: 412 LRMDQAEYVALKAIILLNPDVKGL--KNKQEVDVLREKMFLCLDEYCRRSRGGEEG 251
++++ EY+ LK I +LNP V L ++++ ++ R + CL YC R G
Sbjct: 306 IKLNDVEYLFLKVITILNPAVSDLFAQDQKIIERERNRFAQCLLTYCLREYAENNG 361
>AY349018-1|AAQ55498.1| 310|Caenorhabditis elegans NHR-91B protein.
Length = 310
Score = 32.7 bits (71), Expect = 0.30
Identities = 32/152 (21%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Frame = -3
Query: 733 LCQIGNKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLN----D 566
L +IG++ + L+ W + +P F + ++ L+ W EL+L + + + D
Sbjct: 91 LTRIGDEIVEQLVEWTKTLPFFDELPVEAHTHLLTQRWAELVLLSAGYYACSVFTPDSPD 150
Query: 565 ERENVDSRN----TAPPQLICLMP---GMTLQRNSALQ---AGVGQIFDRVLSELSLKMR 416
E +D + T P + L+ + L + L+ G + R + L
Sbjct: 151 TTEMIDETDEISFTNPQVNLRLLQNRLSLVLGKEIPLEHVAKEAGPLVTR-FTTLLHSFS 209
Query: 415 SLRMDQAEYVALKAIILLNPDVKGLKNKQEVD 320
+L++ YV +KAI LL+ ++ +D
Sbjct: 210 NLKVSPEAYVCIKAITLLHLSADSTLDRSIID 241
>AY349017-1|AAQ55497.1| 474|Caenorhabditis elegans NHR-91A protein.
Length = 474
Score = 32.7 bits (71), Expect = 0.30
Identities = 32/152 (21%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Frame = -3
Query: 733 LCQIGNKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLN----D 566
L +IG++ + L+ W + +P F + ++ L+ W EL+L + + + D
Sbjct: 255 LTRIGDEIVEQLVEWTKTLPFFDELPVEAHTHLLTQRWAELVLLSAGYYACSVFTPDSPD 314
Query: 565 ERENVDSRN----TAPPQLICLMP---GMTLQRNSALQ---AGVGQIFDRVLSELSLKMR 416
E +D + T P + L+ + L + L+ G + R + L
Sbjct: 315 TTEMIDETDEISFTNPQVNLRLLQNRLSLVLGKEIPLEHVAKEAGPLVTR-FTTLLHSFS 373
Query: 415 SLRMDQAEYVALKAIILLNPDVKGLKNKQEVD 320
+L++ YV +KAI LL+ ++ +D
Sbjct: 374 NLKVSPEAYVCIKAITLLHLSADSTLDRSIID 405
>AL132841-5|CAI46629.1| 310|Caenorhabditis elegans Hypothetical
protein Y15E3A.1b protein.
Length = 310
Score = 32.7 bits (71), Expect = 0.30
Identities = 32/152 (21%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Frame = -3
Query: 733 LCQIGNKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLN----D 566
L +IG++ + L+ W + +P F + ++ L+ W EL+L + + + D
Sbjct: 91 LTRIGDEIVEQLVEWTKTLPFFDELPVEAHTHLLTQRWAELVLLSAGYYACSVFTPDSPD 150
Query: 565 ERENVDSRN----TAPPQLICLMP---GMTLQRNSALQ---AGVGQIFDRVLSELSLKMR 416
E +D + T P + L+ + L + L+ G + R + L
Sbjct: 151 TTEMIDETDEISFTNPQVNLRLLQNRLSLVLGKEIPLEHVAKEAGPLVTR-FTTLLHSFS 209
Query: 415 SLRMDQAEYVALKAIILLNPDVKGLKNKQEVD 320
+L++ YV +KAI LL+ ++ +D
Sbjct: 210 NLKVSPEAYVCIKAITLLHLSADSTLDRSIID 241
>AL132841-4|CAB60329.2| 474|Caenorhabditis elegans Hypothetical
protein Y15E3A.1a protein.
Length = 474
Score = 32.7 bits (71), Expect = 0.30
Identities = 32/152 (21%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Frame = -3
Query: 733 LCQIGNKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLN----D 566
L +IG++ + L+ W + +P F + ++ L+ W EL+L + + + D
Sbjct: 255 LTRIGDEIVEQLVEWTKTLPFFDELPVEAHTHLLTQRWAELVLLSAGYYACSVFTPDSPD 314
Query: 565 ERENVDSRN----TAPPQLICLMP---GMTLQRNSALQ---AGVGQIFDRVLSELSLKMR 416
E +D + T P + L+ + L + L+ G + R + L
Sbjct: 315 TTEMIDETDEISFTNPQVNLRLLQNRLSLVLGKEIPLEHVAKEAGPLVTR-FTTLLHSFS 373
Query: 415 SLRMDQAEYVALKAIILLNPDVKGLKNKQEVD 320
+L++ YV +KAI LL+ ++ +D
Sbjct: 374 NLKVSPEAYVCIKAITLLHLSADSTLDRSIID 405
>AF273835-1|AAG15183.1| 476|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 476
Score = 32.7 bits (71), Expect = 0.30
Identities = 32/152 (21%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Frame = -3
Query: 733 LCQIGNKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLN----D 566
L +IG++ + L+ W + +P F + ++ L+ W EL+L + + + D
Sbjct: 257 LTRIGDEIVEQLVEWTKTLPFFDELPVEAHTHLLTQRWAELVLLSAGYYACSVFTPDSPD 316
Query: 565 ERENVDSRN----TAPPQLICLMP---GMTLQRNSALQ---AGVGQIFDRVLSELSLKMR 416
E +D + T P + L+ + L + L+ G + R + L
Sbjct: 317 TTEMIDETDEISFTNPQVNLRLLQNRLSLVLGKEIPLEHVAKEAGPLVTR-FTTLLHSFS 375
Query: 415 SLRMDQAEYVALKAIILLNPDVKGLKNKQEVD 320
+L++ YV +KAI LL+ ++ +D
Sbjct: 376 NLKVSPEAYVCIKAITLLHLSADSTLDRSIID 407
>AF273834-1|AAG15182.1| 475|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 475
Score = 32.7 bits (71), Expect = 0.30
Identities = 32/152 (21%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Frame = -3
Query: 733 LCQIGNKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLN----D 566
L +IG++ + L+ W + +P F + ++ L+ W EL+L + + + D
Sbjct: 256 LTRIGDEIVEQLVEWTKTLPFFDELPVEAHTHLLTQRWAELVLLSAGYYACSVFTPDSPD 315
Query: 565 ERENVDSRN----TAPPQLICLMP---GMTLQRNSALQ---AGVGQIFDRVLSELSLKMR 416
E +D + T P + L+ + L + L+ G + R + L
Sbjct: 316 TTEMIDETDEISFTNPQVNLRLLQNRLSLVLGKEIPLEHVAKEAGPLVTR-FTTLLHSFS 374
Query: 415 SLRMDQAEYVALKAIILLNPDVKGLKNKQEVD 320
+L++ YV +KAI LL+ ++ +D
Sbjct: 375 NLKVSPEAYVCIKAITLLHLSADSTLDRSIID 406
>AF273833-1|AAG15181.1| 475|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 475
Score = 32.7 bits (71), Expect = 0.30
Identities = 32/152 (21%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Frame = -3
Query: 733 LCQIGNKQIAALIVWARDIPHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLN----D 566
L +IG++ + L+ W + +P F + ++ L+ W EL+L + + + D
Sbjct: 256 LTRIGDEIVEQLVEWTKTLPFFDELPVEAHTHLLTQRWAELVLLSAGYYACSVFTPDSPD 315
Query: 565 ERENVDSRN----TAPPQLICLMP---GMTLQRNSALQ---AGVGQIFDRVLSELSLKMR 416
E +D + T P + L+ + L + L+ G + R + L
Sbjct: 316 TTEMIDETDEISFTNPQVNLRLLQNRLSLVLGKEIPLEHVAKEAGPLVTR-FTTLLHSFS 374
Query: 415 SLRMDQAEYVALKAIILLNPDVKGLKNKQEVD 320
+L++ YV +KAI LL+ ++ +D
Sbjct: 375 NLKVSPEAYVCIKAITLLHLSADSTLDRSIID 406
>Z75955-11|CAB00125.1| 412|Caenorhabditis elegans Hypothetical
protein R07B7.16 protein.
Length = 412
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = -3
Query: 466 VGQI-FDRVLSELSLKMRSLRMDQAEYVALKAIILLNPDVKGLKNKQEVDVLREK 305
+G+I + L ++ + +D+ EY+ LKAI++ NP V GL ++ + E+
Sbjct: 287 LGEIKYKNQLQQILHAFLRINVDRVEYMILKAILMRNPSVPGLTLDDQLIIENER 341
>Z75955-9|CAB00123.1| 406|Caenorhabditis elegans Hypothetical
protein R07B7.14 protein.
Length = 406
Score = 32.3 bits (70), Expect = 0.40
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -3
Query: 409 RMDQAEYVALKAIILLNPDVKGLKN--KQEVDVLREKMFLCLDEYCRRSRG 263
++D+ EY+ LK I+L NP + GL +Q ++ R + L YC + G
Sbjct: 303 KIDETEYLLLKGIVLCNPAICGLPESAQQILEDERRRYVRSLLTYCLKQYG 353
>AC006674-1|AAK68390.1| 388|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 119 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.40
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Frame = -3
Query: 724 IGNKQIAALIVWARDI-PHFGQXEIDDQILLIKGSWNELLLFAIAWRSMEFLNDERENVD 548
I ++++ A+I WA + +DD+I ++K S+ L++F++ N R +
Sbjct: 220 IAHRRLIAMIDWADHLFDMMDVNNMDDKIAIVKASYGPLMIFSLC------ANTSRHKIY 273
Query: 547 SRNT-APPQLICLMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAI 371
+ N A P G Q+ +R + EL ++ + + + E +KAI
Sbjct: 274 APNGWAEPY----------------HFG-NQLAERCIDELIDPLKKMNLKEEEITLIKAI 316
Query: 370 ILLNPDVKGL 341
I+LNP +K L
Sbjct: 317 IVLNPYLKTL 326
>Z83235-10|CAB05776.2| 515|Caenorhabditis elegans Hypothetical
protein Y67A6A.2 protein.
Length = 515
Score = 31.9 bits (69), Expect = 0.53
Identities = 25/118 (21%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Frame = -3
Query: 691 WARDIPHFGQXEIDDQILLIKGSWNELLLFAIA-WRSMEFLNDERENVDSRNTAPPQLIC 515
W R +P + Q I+DQI+L K + + A W + + P+ C
Sbjct: 309 WLRALPEYNQMSIEDQIVLAKNRYGTFHWWMCANWTVQAGCEGVCYSNGAYFPKQPEAQC 368
Query: 514 LMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLNPDVKGL 341
+ ++ G+++D LS+ ++ L +D+ E V + A+I+ + ++ L
Sbjct: 369 I---------PDVKGSSGRMYD----SLSIPIKELNLDETEIVLMLAVIIFSDEITEL 413
>Z81496-11|CAB04069.2| 448|Caenorhabditis elegans Hypothetical
protein F09C6.9 protein.
Length = 448
Score = 31.9 bits (69), Expect = 0.53
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -3
Query: 394 EYVALKAIILLNPDVKGLK-NKQEV-DVLREKMFLCLDEYCRRSR 266
EY LKAI L NP V L + QE+ REK L +YC R+R
Sbjct: 350 EYTLLKAICLCNPAVPDLSHHAQEILSKEREKYADALFDYCLRTR 394
>AY204204-1|AAO39205.1| 448|Caenorhabditis elegans nuclear receptor
NHR-116 protein.
Length = 448
Score = 31.9 bits (69), Expect = 0.53
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -3
Query: 394 EYVALKAIILLNPDVKGLK-NKQEV-DVLREKMFLCLDEYCRRSR 266
EY LKAI L NP V L + QE+ REK L +YC R+R
Sbjct: 350 EYTLLKAICLCNPAVPDLSHHAQEILSKEREKYADALFDYCLRTR 394
>AY204201-1|AAO39202.1| 409|Caenorhabditis elegans nuclear receptor
NHR-114 protein.
Length = 409
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -3
Query: 436 ELSLK-MRSLRMDQAEYVALKAIILLNPD 353
+L LK R LR+D E+ A KA+ LNPD
Sbjct: 290 DLVLKPFRDLRLDATEFAAFKAVTFLNPD 318
>AY204162-1|AAO39166.1| 112|Caenorhabditis elegans nuclear receptor
NHR-1 protein.
Length = 112
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 436 ELSLKMRSLRMDQAEYVALKAIILLNPDVKGLKNKQEVDVLREK 305
E+ + R L++ AE+ KA + NPD L + + +V E+
Sbjct: 1 EIMIPFRKLQLSVAEFATFKAALFFNPDALDLSPQAKQEVFEER 44
>AL032645-2|CAA21675.2| 515|Caenorhabditis elegans Hypothetical
protein Y67A6A.2 protein.
Length = 515
Score = 31.9 bits (69), Expect = 0.53
Identities = 25/118 (21%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Frame = -3
Query: 691 WARDIPHFGQXEIDDQILLIKGSWNELLLFAIA-WRSMEFLNDERENVDSRNTAPPQLIC 515
W R +P + Q I+DQI+L K + + A W + + P+ C
Sbjct: 309 WLRALPEYNQMSIEDQIVLAKNRYGTFHWWMCANWTVQAGCEGVCYSNGAYFPKQPEAQC 368
Query: 514 LMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLNPDVKGL 341
+ ++ G+++D LS+ ++ L +D+ E V + A+I+ + ++ L
Sbjct: 369 I---------PDVKGSSGRMYD----SLSIPIKELNLDETEIVLMLAVIIFSDEITEL 413
>AF273814-1|AAG15163.1| 489|Caenorhabditis elegans nuclear receptor
NHR-62 protein.
Length = 489
Score = 31.9 bits (69), Expect = 0.53
Identities = 25/118 (21%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Frame = -3
Query: 691 WARDIPHFGQXEIDDQILLIKGSWNELLLFAIA-WRSMEFLNDERENVDSRNTAPPQLIC 515
W R +P + Q I+DQI+L K + + A W + + P+ C
Sbjct: 283 WLRALPEYNQMSIEDQIVLAKNRYGTFHWWMCANWTVQAGCEGVCYSNGAYFPKQPEAQC 342
Query: 514 LMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLNPDVKGL 341
+ ++ G+++D LS+ ++ L +D+ E V + A+I+ + ++ L
Sbjct: 343 I---------PDVKGSSGRMYD----SLSIPIKELNLDETEIVLMLAVIIFSDEITEL 387
>AF273813-1|AAG15162.1| 454|Caenorhabditis elegans nuclear receptor
NHR-62 protein.
Length = 454
Score = 31.9 bits (69), Expect = 0.53
Identities = 25/118 (21%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Frame = -3
Query: 691 WARDIPHFGQXEIDDQILLIKGSWNELLLFAIA-WRSMEFLNDERENVDSRNTAPPQLIC 515
W R +P + Q I+DQI+L K + + A W + + P+ C
Sbjct: 248 WLRALPEYNQMSIEDQIVLAKNRYGTFHWWMCANWTVQAGCEGVCYSNGAYFPKQPEAQC 307
Query: 514 LMPGMTLQRNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLNPDVKGL 341
+ ++ G+++D LS+ ++ L +D+ E V + A+I+ + ++ L
Sbjct: 308 I---------PDVKGSSGRMYD----SLSIPIKELNLDETEIVLMLAVIIFSDEITEL 352
>Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 31.5 bits (68), Expect = 0.70
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 303 IFSRRTSTSCLFFNPFTSGLRSMMALSATYSAWSMRRERILSDSSESTRSKI 458
I + +CL FNP++ + + + T + W +R R+ S ES R +I
Sbjct: 261 IDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHRDEI 312
>AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 31.5 bits (68), Expect = 0.70
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 303 IFSRRTSTSCLFFNPFTSGLRSMMALSATYSAWSMRRERILSDSSESTRSKI 458
I + +CL FNP++ + + + T + W +R R+ S ES R +I
Sbjct: 261 IDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHRDEI 312
>AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic
multivulva protein LIN-53 p48 protein.
Length = 417
Score = 31.5 bits (68), Expect = 0.70
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 303 IFSRRTSTSCLFFNPFTSGLRSMMALSATYSAWSMRRERILSDSSESTRSKI 458
I + +CL FNP++ + + + T + W +R R+ S ES R +I
Sbjct: 261 IDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHRDEI 312
>Z92825-6|CAB07314.2| 435|Caenorhabditis elegans Hypothetical
protein C13C4.3 protein.
Length = 435
Score = 31.1 bits (67), Expect = 0.92
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -3
Query: 406 MDQAEYVALKAIILLNPDVKGL--KNKQEVDVLREKMFLCLDEYCRRSRGGEEG 251
+++ EY+ LKAI+L NP V L +Q + RE+ L YC + G G
Sbjct: 330 LNRIEYMLLKAIVLCNPAVSSLSISVQQIIGKEREEYVRTLLTYCLLNYGSVHG 383
>Z68222-9|CAE46689.1| 631|Caenorhabditis elegans Hypothetical
protein F58G6.5c protein.
Length = 631
Score = 31.1 bits (67), Expect = 0.92
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = -3
Query: 451 DRVLSELSLKMRSLRMDQAEYVALKAIIL 365
+ ++ +L + MR + MD+ E+V LKA+IL
Sbjct: 464 EHLMEDLVIPMREMDMDEGEFVILKALIL 492
>Z68222-8|CAC70146.2| 613|Caenorhabditis elegans Hypothetical
protein F58G6.5b protein.
Length = 613
Score = 31.1 bits (67), Expect = 0.92
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = -3
Query: 451 DRVLSELSLKMRSLRMDQAEYVALKAIIL 365
+ ++ +L + MR + MD+ E+V LKA+IL
Sbjct: 446 EHLMEDLVIPMREMDMDEGEFVILKALIL 474
>Z68217-11|CAE46673.1| 631|Caenorhabditis elegans Hypothetical
protein F58G6.5c protein.
Length = 631
Score = 31.1 bits (67), Expect = 0.92
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = -3
Query: 451 DRVLSELSLKMRSLRMDQAEYVALKAIIL 365
+ ++ +L + MR + MD+ E+V LKA+IL
Sbjct: 464 EHLMEDLVIPMREMDMDEGEFVILKALIL 492
>Z68217-10|CAC70099.2| 613|Caenorhabditis elegans Hypothetical
protein F58G6.5b protein.
Length = 613
Score = 31.1 bits (67), Expect = 0.92
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = -3
Query: 451 DRVLSELSLKMRSLRMDQAEYVALKAIIL 365
+ ++ +L + MR + MD+ E+V LKA+IL
Sbjct: 446 EHLMEDLVIPMREMDMDEGEFVILKALIL 474
>Z68217-4|CAA92467.2| 499|Caenorhabditis elegans Hypothetical
protein F58G6.5a protein.
Length = 499
Score = 31.1 bits (67), Expect = 0.92
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = -3
Query: 451 DRVLSELSLKMRSLRMDQAEYVALKAIIL 365
+ ++ +L + MR + MD+ E+V LKA+IL
Sbjct: 332 EHLMEDLVIPMREMDMDEGEFVILKALIL 360
>AF273780-1|AAG15129.1| 509|Caenorhabditis elegans nuclear receptor
NHR-34 protein.
Length = 509
Score = 31.1 bits (67), Expect = 0.92
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = -3
Query: 451 DRVLSELSLKMRSLRMDQAEYVALKAIIL 365
+ ++ +L + MR + MD+ E+V LKA+IL
Sbjct: 342 EHLMEDLVIPMREMDMDEGEFVILKALIL 370
>Z81050-12|CAN86586.1| 420|Caenorhabditis elegans Hypothetical
protein C50B6.14b protein.
Length = 420
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -3
Query: 409 RMDQAEYVALKAIILLNPDVKGLKNKQEVDVL--REKMFLCLDEYCRRSRG 263
++ Q EYV LKAI L NP V L ++ + R+K L ++C R+ G
Sbjct: 317 QVQQIEYVLLKAICLCNPAVPDLSKHAQLLLAEERQKYSEALLDHCIRNIG 367
>Z81050-11|CAN86585.1| 399|Caenorhabditis elegans Hypothetical
protein C50B6.14a protein.
Length = 399
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -3
Query: 409 RMDQAEYVALKAIILLNPDVKGLKNKQEVDVL--REKMFLCLDEYCRRSRG 263
++ Q EYV LKAI L NP V L ++ + R+K L ++C R+ G
Sbjct: 296 QVQQIEYVLLKAICLCNPAVPDLSKHAQLLLAEERQKYSEALLDHCIRNIG 346
>U97008-3|AAB52308.1| 380|Caenorhabditis elegans Hypothetical
protein C03G6.8 protein.
Length = 380
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -3
Query: 394 EYVALKAIILLNPDVKGLKNKQEVDVLREKMFL--CLDEYCRRSR 266
EYV LKA+ NP V GL + + +E+ L + CR++R
Sbjct: 283 EYVLLKAMCFCNPAVTGLSQHAQTTLAKERQQFGNLLFDLCRKNR 327
>AL021387-2|CAA16168.1| 463|Caenorhabditis elegans Hypothetical
protein H01A20.1 protein.
Length = 463
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/37 (43%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Frame = -3
Query: 448 RVLSELSLK-MRSLRMDQAEYVALKAIILLNPDVKGL 341
R ++E+ ++ +R L + + E VALKAI+ L+ +VKGL
Sbjct: 347 RNMTEMIIQQLRRLNVTKTEMVALKAIMALDHNVKGL 383
>AF408754-1|AAO27833.1| 418|Caenorhabditis elegans nuclear receptor
protein protein.
Length = 418
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -3
Query: 436 ELSLK-MRSLRMDQAEYVALKAIILLNPD 353
+L LK R L++D E+ A KA+ LNPD
Sbjct: 299 DLVLKPFRDLQLDATEFAAFKAVTFLNPD 327
>AF273769-1|AAG15118.1| 463|Caenorhabditis elegans nuclear receptor
NHR-3 protein.
Length = 463
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/37 (43%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Frame = -3
Query: 448 RVLSELSLK-MRSLRMDQAEYVALKAIILLNPDVKGL 341
R ++E+ ++ +R L + + E VALKAI+ L+ +VKGL
Sbjct: 347 RNMTEMIIQQLRRLNVTKTEMVALKAIMALDHNVKGL 383
>AF083222-1|AAD03680.1| 463|Caenorhabditis elegans nuclear receptor
NHR-3 protein.
Length = 463
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/37 (43%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Frame = -3
Query: 448 RVLSELSLK-MRSLRMDQAEYVALKAIILLNPDVKGL 341
R ++E+ ++ +R L + + E VALKAI+ L+ +VKGL
Sbjct: 347 RNMTEMIIQQLRRLNVTKTEMVALKAIMALDHNVKGL 383
>AC084155-10|AAG23368.3| 418|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 114, isoform a protein.
Length = 418
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -3
Query: 436 ELSLK-MRSLRMDQAEYVALKAIILLNPD 353
+L LK R L++D E+ A KA+ LNPD
Sbjct: 299 DLVLKPFRDLQLDATEFAAFKAVTFLNPD 327
>Z81050-13|CAB02857.3| 448|Caenorhabditis elegans Hypothetical
protein C50B6.8 protein.
Length = 448
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = -3
Query: 463 GQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLNPDVKGL-KNKQEV-DVLREKMFLCL 290
G ++ + ++ +R + + E+V LKAI L NP V L ++ QE+ RE+ L
Sbjct: 328 GMVYAETVMSIAPLIRC-EIQETEFVLLKAICLCNPAVPDLSQHAQEILGREREQYADAL 386
Query: 289 DEYCRRSR 266
++C R+R
Sbjct: 387 FDHCLRNR 394
>Z75542-4|CAA99861.1| 424|Caenorhabditis elegans Hypothetical
protein F55D12.4 protein.
Length = 424
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = -3
Query: 394 EYVALKAIILLNPDVKGLKNKQEVDVLREKMFLCLDEYCRRSRGGE 257
E ++ II L D + L+ K +++ + EK+ +DEYC+ ++ E
Sbjct: 319 EVASVILIIGLISDEEALEEKGKIEEIVEKLKSAVDEYCKMNKRSE 364
>AF078157-6|AAQ62458.1| 406|Caenorhabditis elegans Hypothetical
protein F25E5.6b protein.
Length = 406
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -3
Query: 463 GQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLNPDVKGLKNKQEVDVL--REKMFLCL 290
G ++ + ++ +R + + EY+ LKAI L NP V L + + RE+ L
Sbjct: 286 GMVYAETVMSMAPLIRC-NIQEIEYILLKAICLCNPAVPELSTHAQKILAKEREQYADAL 344
Query: 289 DEYCRRSR 266
++C RSR
Sbjct: 345 FDHCIRSR 352
>Z75955-8|CAB00122.1| 410|Caenorhabditis elegans Hypothetical
protein R07B7.13 protein.
Length = 410
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 412 LRMDQAEYVALKAIILLNPDVKGL--KNKQEVDVLREKMFLCLDEYCRRSRGGEEG 251
+++D EY+ LKAI + NP V ++++ +D R L YC + G G
Sbjct: 306 VKLDYVEYLFLKAITMCNPAVSDFPAEDQKIIDKHRFNYAQSLLNYCLKQHGQIHG 361
>U97003-2|AAB52271.2| 376|Caenorhabditis elegans Hypothetical
protein F47C10.1 protein.
Length = 376
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -3
Query: 451 DRVLSELSLKMRSLRMDQAEYVALKAIILLNPDVKGLKN-KQEVDVLREKMFL-CLDEYC 278
DR+ L K+ L + EY+ + I+ P + GL QE+ ++K + L EYC
Sbjct: 261 DRIQEMLVTKICGLCLTPEEYILTQIILFCTPRLTGLSQFAQEIIGEQQKKYCNSLLEYC 320
Query: 277 RRSR 266
+ +R
Sbjct: 321 KLTR 324
>AY204202-1|AAO39203.1| 339|Caenorhabditis elegans nuclear receptor
NHR-114 protein.
Length = 339
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -3
Query: 436 ELSLK-MRSLRMDQAEYVALKAIILLNPDVKGLKNKQEVDV 317
+L LK R L++D E+ A KA+ LNP G+ + ++ +
Sbjct: 299 DLVLKPFRDLQLDATEFAAFKAVTFLNPGPGGISIRAKLSL 339
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 335 ILQSFYVRIEEYDGLERDVLGLVHAEGAHLERQLGEHAVE-DLPHAGLQRGVALQRHAW 508
IL+ + R E DG + L L+H EG L ++ EH E H +Q R W
Sbjct: 2554 ILEQHHERKAEIDGRSEE-LRLLHEEGQALNQEQPEHKAEVQRAHKRVQNSEHQLRQTW 2611
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 335 ILQSFYVRIEEYDGLERDVLGLVHAEGAHLERQLGEHAVE-DLPHAGLQRGVALQRHAW 508
IL+ + R E DG + L L+H EG L ++ EH E H +Q R W
Sbjct: 2554 ILEQHHERKAEIDGRSEE-LRLLHEEGQALNQEQPEHKAEVQRAHKRVQNSEHQLRQTW 2611
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 335 ILQSFYVRIEEYDGLERDVLGLVHAEGAHLERQLGEHAVE-DLPHAGLQRGVALQRHAW 508
IL+ + R E DG + L L+H EG L ++ EH E H +Q R W
Sbjct: 2554 ILEQHHERKAEIDGRSEE-LRLLHEEGQALNQEQPEHKAEVQRAHKRVQNSEHQLRQTW 2611
>Z92837-4|CAH10846.1| 193|Caenorhabditis elegans Hypothetical
protein R03E1.4 protein.
Length = 193
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 662 LPEVWNVTRPNNESGYLFVAYLTKTRNGSSXXG 760
+PE +NV P+N L AY+ R SS G
Sbjct: 112 VPETFNVAGPSNSKMVLLEAYMNTVRQTSSVVG 144
>AF016665-9|AAC71177.1| 363|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 166 protein.
Length = 363
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/59 (23%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = -3
Query: 448 RVLSELSLKMRSLRMDQAEYVALKAIILLNPDVKGL--KNKQEVDVLREKMFLCLDEYC 278
R+L+ + ++++ + EY+ L I++ NP++ GL K + +K L ++C
Sbjct: 243 RLLTTPVKPLIAMKLTETEYLLLGIIVICNPEIDGLSPSGKAIITAFLQKTINVLLQFC 301
>AY204185-1|AAO39189.1| 400|Caenorhabditis elegans nuclear receptor
NHR-101 protein.
Length = 400
Score = 28.3 bits (60), Expect = 6.5
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = -3
Query: 490 RNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLNPDVK-GLKNKQEVDVL 314
R S L Q+ D VL R + ++ E+ A KAI LNPD L+ K ++
Sbjct: 272 RPSGLNRKKYQVLDLVLKPF----REIDINFNEFAAFKAITFLNPDADVSLQAKLAINEE 327
Query: 313 REKMFLCLDEYCRRSRGGEE 254
R + L +Y R+ G E+
Sbjct: 328 RISVTKQLYDYMVRNDGIEK 347
>AL022272-4|CAC42310.2| 391|Caenorhabditis elegans Hypothetical
protein H12C20.6a protein.
Length = 391
Score = 28.3 bits (60), Expect = 6.5
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = -3
Query: 490 RNSALQAGVGQIFDRVLSELSLKMRSLRMDQAEYVALKAIILLNPDVK-GLKNKQEVDVL 314
R S L Q+ D VL R + ++ E+ A KAI LNPD L+ K ++
Sbjct: 263 RPSGLNRKKYQVLDLVLKPF----REIDINFNEFAAFKAITFLNPDADVSLQAKLAINEE 318
Query: 313 REKMFLCLDEYCRRSRGGEE 254
R + L +Y R+ G E+
Sbjct: 319 RISVTKQLYDYMVRNDGIEK 338
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 327 SCLFFNPFTSGLRSMMALSATYSAWSMRRER 419
+C+ FNPF+ + + ++ T + W MR R
Sbjct: 268 NCITFNPFSEYILATGSVDKTVALWDMRNMR 298
>Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical protein
C08B11.3 protein.
Length = 1244
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 491 LQRHAWH*TNELRRRRIPRVYVLSFIIEELHRPPCDSEQQQ 613
L+RH H L R+ + LS ++ ELH+ P E+QQ
Sbjct: 1099 LRRHESH-ICWLALSRLESAHALSQLLSELHQAPAAEEEQQ 1138
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,832,946
Number of Sequences: 27780
Number of extensions: 242545
Number of successful extensions: 1009
Number of sequences better than 10.0: 117
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -