Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_N11
         (834 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0239 - 23843235-23843243,23843334-23844047,23844138-238442...    31   0.86 
04_04_0824 - 28399144-28399385,28400193-28400312,28400422-284004...    29   6.0  
05_07_0327 - 29275916-29276017,29276101-29276283,29276392-292764...    28   8.0  

>04_04_0239 -
           23843235-23843243,23843334-23844047,23844138-23844287,
           23844389-23844601,23844697-23844811,23844919-23846300,
           23847217-23847279
          Length = 881

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = -3

Query: 613 AVPVEKPVAYPVHVPVDRPYAVHVEKPRGRSRKGASAPTLP 491
           AVP+ KPV+ P   P   P +     P G +    S PT P
Sbjct: 757 AVPLPKPVSIPASGPAPAPVSATTAAPVGAAAAPISEPTAP 797


>04_04_0824 -
           28399144-28399385,28400193-28400312,28400422-28400453,
           28400531-28400625,28400713-28400786,28400883-28401018,
           28401096-28401333,28401508-28401555,28401593-28401780,
           28401862-28401983,28402061-28402226,28402321-28402443,
           28403068-28403139,28403244-28403351,28404212-28404328,
           28404458-28404596,28404702-28404808,28404904-28405013,
           28405141-28405274,28405348-28405497,28405571-28405791,
           28405868-28406677,28410261-28410473
          Length = 1254

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = +1

Query: 526 GHGASQRARRKACRQEHGRGRPLASQLG 609
           GHG+SQRA R    Q+HG GR    Q G
Sbjct: 105 GHGSSQRAERGP--QQHGGGRGWVPQHG 130


>05_07_0327 -
           29275916-29276017,29276101-29276283,29276392-29276453,
           29276590-29276671,29276922-29276987,29277297-29277359,
           29277466-29277570,29277678-29277887,29277988-29278103,
           29278875-29279082
          Length = 398

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 364 RDWLLDCYGHVPLNSYGVGPVNGHFDGNGDWPVDR 468
           +D L+D Y +VP   YG+ P       N D P DR
Sbjct: 67  KDGLMDNYKNVPQFLYGLSPAQIEMFMNDDNPYDR 101


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,437,976
Number of Sequences: 37544
Number of extensions: 276994
Number of successful extensions: 676
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)