Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_N11
         (834 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_47039| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.5  
SB_44753| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.1  

>SB_47039| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 384

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +1

Query: 346 GNLHWYRDWLLDCYGHVPLNSYGVGPVNG--HFDGNGDWPV 462
           GN H+    ++  YG+V  ++ G+ PVNG  HF   G  PV
Sbjct: 342 GNAHFSTCGMMPVYGNVHFSTCGMMPVNGNAHFSTCGMMPV 382


>SB_44753| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1379

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 15/37 (40%), Positives = 17/37 (45%)
 Frame = -2

Query: 833 TXLXSXSPTPXRFQGPXLTPXRNTCHTPXEVKXPXPQ 723
           T   S +PTP     P  TP  +T HTP     P PQ
Sbjct: 522 TPQSSTNPTPQSSTSP--TPQSSTIHTPQSSTSPTPQ 556


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,500,753
Number of Sequences: 59808
Number of extensions: 306685
Number of successful extensions: 637
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 636
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2347493764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)