Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_N09
(795 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0521 + 3867922-3867967,3868282-3868544,3868680-3868744,386... 33 0.26
09_04_0460 - 17779111-17780184 29 3.2
06_03_0436 + 20755816-20756025,20756124-20756240,20756942-207571... 29 3.2
02_01_0399 - 2905026-2905406,2905522-2905630,2905809-2907475,290... 29 3.2
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 29 3.2
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 29 4.3
07_01_0777 + 6004370-6004559,6005089-6005207,6005411-6005538,600... 29 5.6
02_03_0076 - 14861337-14861974,14862008-14862119,14862150-14863580 29 5.6
11_06_0577 - 25158833-25162864 28 7.4
04_04_0239 - 23843235-23843243,23843334-23844047,23844138-238442... 28 7.4
01_01_0888 + 6990354-6991862,6991970-6992431 28 7.4
04_04_1676 - 35302498-35302836,35302911-35302997,35303063-353032... 28 9.8
04_03_0947 - 21008389-21008448,21009178-21009263,21009357-210094... 28 9.8
03_06_0754 - 36025579-36027000 28 9.8
03_05_0850 + 28206166-28206767,28207648-28207891,28208076-282083... 28 9.8
>07_01_0521 +
3867922-3867967,3868282-3868544,3868680-3868744,
3868828-3868990,3869798-3869946,3870041-3870289,
3870860-3871028,3871110-3871202,3871703-3871952,
3872127-3872217,3872673-3872769
Length = 544
Score = 33.1 bits (72), Expect = 0.26
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 59 VEGFHCHGWIMKP*YSGLSATVPLFPHTRRS 151
+ GF W++KP Y +S ++PLF + RRS
Sbjct: 107 ISGFSSLPWLIKPLYGFISDSIPLFGYRRRS 137
>09_04_0460 - 17779111-17780184
Length = 357
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/78 (24%), Positives = 30/78 (38%)
Frame = -3
Query: 316 DRYGDRKTWGSNDSSEKRHTWYLYPVKVGDQQLFLIENREYRQGLKLDANVDRXRGPPCV 137
D +GD + H WY+ V + + + I EYR G+ + C+
Sbjct: 107 DGFGDGDEEAGGGGGDVHHVWYIRTVGLDEATITSIATAEYRAGVGWGGDC-----AVCL 161
Query: 136 GE*RDSRRQPRVLRLHNP 83
GE RD + R +P
Sbjct: 162 GEFRDGELVRLLPRCSHP 179
>06_03_0436 +
20755816-20756025,20756124-20756240,20756942-20757137,
20757393-20757544,20757653-20757736,20757848-20757925,
20757958-20758116,20758219-20758251,20759119-20759826,
20759917-20759998,20760093-20760449,20760586-20760692,
20760796-20761001,20761480-20761623,20761715-20761800,
20762120-20762283,20762559-20763119
Length = 1147
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 371 LQDTEHRTRDVLETGRERGQIWRQEDLGIE*F 276
L+D++ R RD+ E R QIW Q+++ + F
Sbjct: 539 LEDSKTRVRDLEELLESRSQIWEQKEIRLNQF 570
>02_01_0399 - 2905026-2905406,2905522-2905630,2905809-2907475,
2907650-2907790,2907870-2908043,2908577-2908851,
2909592-2909755,2910409-2910536,2910628-2910734,
2911747-2911880,2912266-2912441,2912530-2914257,
2915084-2915239,2915328-2915486,2915581-2915751,
2915931-2916047,2916417-2916473,2916565-2916680,
2916790-2916916,2917862-2917945
Length = 2056
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/94 (22%), Positives = 36/94 (38%)
Frame = -3
Query: 472 DRYKDRLTWGDGKDYTSYRVSWRLISLWENNNVIFKILNTEHEMYLKLDVNVDRYGDRKT 293
D KD+ +WG+ S +W + + N + + + V+ D+++
Sbjct: 1725 DSVKDKESWGNVPASPSDS-AWNAAPVSQGNESSDAKQSDSWDGWKSAGVDASTNKDKES 1783
Query: 292 WGSNDSSEKRHTWYLYPVKVGDQQLFLIENREYR 191
WG+ +S W PV GD E E R
Sbjct: 1784 WGNVPASPSDSAWNAAPVSQGDDVWNSAEANESR 1817
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +1
Query: 124 PVIPPHKAVPXTGPRSRP--ASGPAGTPDSQ*GTAVGRPPS 240
PV PP AVP P+ +P A A T +S T PP+
Sbjct: 207 PVAPPGAAVPPAQPQPQPPQAGAEAVTTESTEATQAANPPA 247
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +1
Query: 133 PPHKAVPXTGPRSRPASGPAGTPDSQ*GTAVGRPPSP 243
PP P G PAS P TP + + G PSP
Sbjct: 1144 PPSSQSPPPGSSPPPASPPPSTPSAPPTNSSGSAPSP 1180
>07_01_0777 +
6004370-6004559,6005089-6005207,6005411-6005538,
6005645-6005749,6007156-6008650
Length = 678
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +2
Query: 467 PVNVSIQFESLIVMVADE----FNSLLVEYELEFAREVIFDDVLVALVPQFVRERHGVLD 634
P+N + F S + V F++L + L A +I +L FVRE H +LD
Sbjct: 376 PINRLLTFASTVSKVNGSPEKLFHTLQMHKALSEASPMIQQALLGEQKEFFVRELHRILD 435
Query: 635 ALRDEPRD 658
L D R+
Sbjct: 436 TLEDSARE 443
>02_03_0076 - 14861337-14861974,14862008-14862119,14862150-14863580
Length = 726
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +1
Query: 115 GDCPVIPPHKAVPXTGPRSRPASGPAGTPDSQ*GTAVGRPPSPG 246
GD IPP +P GP+ P A PD +G P + G
Sbjct: 516 GDFANIPPEDDLPPAGPQPGPNDDNADDPDDGNIWQLGHPGNQG 559
>11_06_0577 - 25158833-25162864
Length = 1343
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = -2
Query: 458 PPNLGRWKRLHQLPSQLATHLSLGKQQRHLQDTEHRTRDVLETGRERGQI 309
PP G W L +P+ L+T + + + + + + R RDV E + G +
Sbjct: 86 PPEPGFWPWLRHVPTWLSTVPTRHRLAKKIHELKDRVRDVGERRQRYGVV 135
>04_04_0239 -
23843235-23843243,23843334-23844047,23844138-23844287,
23844389-23844601,23844697-23844811,23844919-23846300,
23847217-23847279
Length = 881
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 133 PPHKAVPXTGPRSRPASGPAGTPDSQ*GTA-VGRPPSP 243
P +AVP P S PASGPA P S A VG +P
Sbjct: 753 PAPQAVPLPKPVSIPASGPAPAPVSATTAAPVGAAAAP 790
>01_01_0888 + 6990354-6991862,6991970-6992431
Length = 656
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 425 QLPSQLATHLSLGKQQRHLQDTEHRTRD 342
+L Q+ THL G+QQ+ Q E R +D
Sbjct: 131 KLEKQITTHLRGGRQQQQQQQPEQRRQD 158
>04_04_1676 -
35302498-35302836,35302911-35302997,35303063-35303286,
35303375-35303675,35303762-35303860,35304895-35305032,
35305108-35305326
Length = 468
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +1
Query: 115 GDCPVIPPHKAVPXTGPRSRPASGPAGTPDSQ*GTAVGRPP 237
G C + P A P S PA+ PA P+ + PP
Sbjct: 362 GSCSLSSPPAAPPKMAAASPPAAAPAPAPEMAPSSPPAEPP 402
>04_03_0947 -
21008389-21008448,21009178-21009263,21009357-21009436,
21010514-21010584
Length = 98
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +1
Query: 31 DKVYYNMVRCRRVSLPRLDYEAVVLGVVGDCPVIPPHKAVPXTGPRSRPASGPAGT 198
D Y V+ + VSL + + V L V V+ ++A T P P G A T
Sbjct: 42 DGFYLQSVKGKGVSLSEVSGKGVSLSEVTRSSVVRCYQATEYTAPIESPTEGAANT 97
>03_06_0754 - 36025579-36027000
Length = 473
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -2
Query: 434 RLHQLPSQLATHLSLGKQQRHLQDTEHRTRDVLETGRER 318
R H++ Q+A +L L D EH R +L+T R
Sbjct: 145 RAHKMDKQVAATSALRTAMEDLADAEHGLRKLLQTSSSR 183
>03_05_0850 +
28206166-28206767,28207648-28207891,28208076-28208389,
28209013-28209067
Length = 404
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 124 PVIPPHKAVPXTGPRSRPASGPAGTPDSQ*GTAVGRPPSPG 246
P +PP + P P S P S + TP + V RPP G
Sbjct: 10 PSLPPSSSSPRISPHSTPVSLTSATP-----SGVHRPPGCG 45
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,211,098
Number of Sequences: 37544
Number of extensions: 482781
Number of successful extensions: 1641
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1640
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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