Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_N09
         (795 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   2.7  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    25   2.7  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   6.2  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
 Frame = +1

Query: 106 GVVGDCPVIPPHKAVPXTGPRSRPASGPAGTPDSQ*GTAV-GRPPSPG 246
           G  G+ P +PP +  P   P      G  G P       + G P +PG
Sbjct: 702 GQKGETPQLPPQRKGPPGPPGFNGPKGDKGLPGLAGPAGIPGAPGAPG 749


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 216 NSCWSPTFTGYKYQVCLFSLESFD 287
           N CW    +G+K Q C  S++  D
Sbjct: 297 NLCWKCGLSGHKKQACTNSVKCLD 320


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 609 YANDMAFLMPCETSRETTSR 668
           YA+D+A L+P  T+ E  +R
Sbjct: 718 YADDLALLVPATTTDEVRAR 737


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 792,718
Number of Sequences: 2352
Number of extensions: 17140
Number of successful extensions: 36
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83576403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)