Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_N09
(795 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK131480-1|BAD18625.1| 325|Homo sapiens protein ( Homo sapiens ... 40 0.008
AF363689-1|AAK73515.1| 1608|Homo sapiens capicua protein protein. 33 0.90
AC006486-3|AAD11988.1| 1453|Homo sapiens BC85722_1 protein. 33 0.90
AB002304-1|BAA20765.1| 1451|Homo sapiens KIAA0306 protein. 33 0.90
J05070-1|AAA51539.1| 707|Homo sapiens CLG4A protein. 33 1.6
DQ194553-1|ABA03169.1| 707|Homo sapiens matrix metallopeptidase... 33 1.6
BC006093-1|AAH06093.1| 707|Homo sapiens matrix metallopeptidase... 33 1.6
AL162458-5|CAC10459.1| 707|Homo sapiens matrix metallopeptidase... 33 1.6
AF538844-1|AAM97934.1| 707|Homo sapiens matrix metalloproteinas... 33 1.6
D85511-1|BAA22226.1| 607|Homo sapiens MT3-MMP protein. 32 2.7
D83647-1|BAA12023.1| 457|Homo sapiens metalloproteinase protein. 32 2.7
D83646-1|BAA12022.1| 607|Homo sapiens metalloproteinase protein. 32 2.7
DQ003082-1|AAX84515.1| 607|Homo sapiens matrix metalloproteinas... 32 2.7
BC075005-1|AAH75005.1| 607|Homo sapiens matrix metallopeptidase... 32 2.7
BC075004-1|AAH75004.1| 607|Homo sapiens matrix metallopeptidase... 32 2.7
BC069500-1|AAH69500.1| 607|Homo sapiens matrix metallopeptidase... 32 2.7
AB009303-1|BAA23742.1| 607|Homo sapiens membrane-type matrix me... 32 2.7
BC139924-1|AAI39925.1| 584|Homo sapiens SMARCA4 protein protein. 31 3.6
BC139917-1|AAI39918.1| 584|Homo sapiens SMARCA4 protein protein. 31 3.6
AY044449-1|AAK95951.1| 1907|Homo sapiens muscle alpha-kinase pro... 31 3.6
AF012303-1|AAC33409.1| 124|Homo sapiens nuclear mitotic apparat... 31 3.6
AB037751-1|BAA92568.1| 945|Homo sapiens KIAA1330 protein protein. 31 3.6
Z46389-1|CAA86523.1| 380|Homo sapiens vasodilator-stimulated ph... 31 4.8
X98534-1|CAA67147.2| 378|Homo sapiens vasodilator-stimulated ph... 31 4.8
BC038224-1|AAH38224.1| 380|Homo sapiens vasodilator-stimulated ... 31 4.8
BC026019-1|AAH26019.1| 380|Homo sapiens vasodilator-stimulated ... 31 4.8
BC025959-1|AAH25959.1| 492|Homo sapiens dynein, cytoplasmic 1, ... 31 4.8
AY046538-1|AAL03971.1| 388|Homo sapiens retina specific regulat... 31 4.8
AF035812-1|AAB88513.1| 492|Homo sapiens dynein light intermedia... 31 4.8
U79754-1|AAF21464.1| 600|Homo sapiens proline oxidase 2 protein. 31 6.3
D29677-1|BAA06147.2| 1943|Homo sapiens KIAA0054 protein. 30 8.4
BC130582-1|AAI30583.1| 1942|Homo sapiens helicase with zinc fing... 30 8.4
AK057719-1|BAB71551.1| 195|Homo sapiens protein ( Homo sapiens ... 30 8.4
AF009040-1|AAC51922.1| 1575|Homo sapiens synaptojanin protein. 30 8.4
AF009039-1|AAC51921.1| 1311|Homo sapiens synaptojanin protein. 30 8.4
AE006465-11|AAK61265.1| 436|Homo sapiens unknown protein. 30 8.4
>AK131480-1|BAD18625.1| 325|Homo sapiens protein ( Homo sapiens
cDNA FLJ16652 fis, clone TESTI4036767. ).
Length = 325
Score = 40.3 bits (90), Expect = 0.008
Identities = 31/105 (29%), Positives = 42/105 (40%), Gaps = 11/105 (10%)
Frame = -2
Query: 596 RGPQGHRRRLLPERIPTHTRPKEN*THRQPLQSSSQTGC*R*PVQRPPNLGRWKR----- 432
R PQ P+R PTH P+ + THR P + + R P RPP R
Sbjct: 36 RAPQRDPTHRAPQRDPTHRAPQRDPTHRAPQRDPTHRAPQRDPTHRPPQRDPTHRAPQRD 95
Query: 431 -LHQLPSQLATHLSLGKQQRH---LQDTEHRT--RDVLETGRERG 315
H+ P + TH + + RH + HR RD +RG
Sbjct: 96 PTHRAPQRDPTHRAPQRGPRHRAPQRSPRHRAPQRDPTHRAPQRG 140
Score = 39.9 bits (89), Expect = 0.010
Identities = 24/75 (32%), Positives = 32/75 (42%)
Frame = -2
Query: 596 RGPQGHRRRLLPERIPTHTRPKEN*THRQPLQSSSQTGC*R*PVQRPPNLGRWKRLHQLP 417
R PQ R P+R P H P+ + THR P + R P R P G H+ P
Sbjct: 108 RAPQRGPRHRAPQRSPRHRAPQRDPTHRAPQRGPRHRAPQRDPTHRAPQRG---PRHRAP 164
Query: 416 SQLATHLSLGKQQRH 372
+ TH + + RH
Sbjct: 165 QRGPTHRAPQRGPRH 179
Score = 38.7 bits (86), Expect = 0.024
Identities = 24/75 (32%), Positives = 31/75 (41%)
Frame = -2
Query: 596 RGPQGHRRRLLPERIPTHTRPKEN*THRQPLQSSSQTGC*R*PVQRPPNLGRWKRLHQLP 417
R PQ P+R PTH P+ HR P +S R P R P G H+ P
Sbjct: 90 RAPQRDPTHRAPQRDPTHRAPQRGPRHRAPQRSPRHRAPQRDPTHRAPQRG---PRHRAP 146
Query: 416 SQLATHLSLGKQQRH 372
+ TH + + RH
Sbjct: 147 QRDPTHRAPQRGPRH 161
Score = 36.3 bits (80), Expect = 0.13
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = -2
Query: 596 RGPQGHRRRLLPERIPTHTRPKEN*THRQPLQSSSQTGC*R*PVQRPPNLGRWKRLHQLP 417
R PQ P+R PTH P+ + THR P + + R P R P + H+ P
Sbjct: 27 RAPQRDPTHRAPQRDPTHRAPQRDPTHRAPQRDPTHRAPQRDPTHRAP---QRDPTHRPP 83
Query: 416 SQLATHLSLGKQQRH---LQDTEHR 351
+ TH + + H +D HR
Sbjct: 84 QRDPTHRAPQRDPTHRAPQRDPTHR 108
Score = 36.3 bits (80), Expect = 0.13
Identities = 22/66 (33%), Positives = 28/66 (42%)
Frame = -2
Query: 596 RGPQGHRRRLLPERIPTHTRPKEN*THRQPLQSSSQTGC*R*PVQRPPNLGRWKRLHQLP 417
R PQ R P+R PTH P+ HR P + + R P R P G H+ P
Sbjct: 135 RAPQRGPRHRAPQRDPTHRAPQRGPRHRAPQRGPTHRAPQRGPRHRAPQRG---PRHRAP 191
Query: 416 SQLATH 399
+ TH
Sbjct: 192 QRGPTH 197
Score = 33.1 bits (72), Expect = 1.2
Identities = 19/58 (32%), Positives = 23/58 (39%)
Frame = -2
Query: 596 RGPQGHRRRLLPERIPTHTRPKEN*THRQPLQSSSQTGC*R*PVQRPPNLGRWKRLHQ 423
R PQ P+R P H P+ + THR P + R P R P G R Q
Sbjct: 126 RAPQRDPTHRAPQRGPRHRAPQRDPTHRAPQRGPRHRAPQRGPTHRAPQRGPRHRAPQ 183
Score = 32.7 bits (71), Expect = 1.6
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = -2
Query: 596 RGPQGHRRRLLPERIPTHTRPKEN*THRQPLQSSSQTGC*R*PVQRPP 453
R PQ R P+R PTH P+ HR P + R P R P
Sbjct: 153 RAPQRGPRHRAPQRGPTHRAPQRGPRHRAPQRGPRHRAPQRGPTHRAP 200
Score = 32.3 bits (70), Expect = 2.1
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = -2
Query: 596 RGPQGHRRRLLPERIPTHTRPKEN*THRQPLQSSSQTGC*R*PVQRPP 453
R PQ R P+R P H P+ THR P + R P R P
Sbjct: 171 RAPQRGPRHRAPQRGPRHRAPQRGPTHRAPQRDPGWRAPQRGPTHRAP 218
Score = 31.9 bits (69), Expect = 2.7
Identities = 19/58 (32%), Positives = 22/58 (37%)
Frame = -2
Query: 596 RGPQGHRRRLLPERIPTHTRPKEN*THRQPLQSSSQTGC*R*PVQRPPNLGRWKRLHQ 423
R PQ P+R P H P+ THR P + R P R P G R Q
Sbjct: 144 RAPQRDPTHRAPQRGPRHRAPQRGPTHRAPQRGPRHRAPQRGPRHRAPQRGPTHRAPQ 201
>AF363689-1|AAK73515.1| 1608|Homo sapiens capicua protein protein.
Length = 1608
Score = 33.5 bits (73), Expect = 0.90
Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 106 GVVGDCPVIPPHKAVPXTGPRSRPASGPAGT-PDSQ*GTAVGRPPSP 243
G PV PP P PA GP T P S GTA PP P
Sbjct: 1530 GAEAPLPVPPPTGTAAAPAPTPSPAGGPDPTSPSSDSGTAQAAPPLP 1576
>AC006486-3|AAD11988.1| 1453|Homo sapiens BC85722_1 protein.
Length = 1453
Score = 33.5 bits (73), Expect = 0.90
Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 106 GVVGDCPVIPPHKAVPXTGPRSRPASGPAGT-PDSQ*GTAVGRPPSP 243
G PV PP P PA GP T P S GTA PP P
Sbjct: 1375 GAEAPLPVPPPTGTAAAPAPTPSPAGGPDPTSPSSDSGTAQAAPPLP 1421
>AB002304-1|BAA20765.1| 1451|Homo sapiens KIAA0306 protein.
Length = 1451
Score = 33.5 bits (73), Expect = 0.90
Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 106 GVVGDCPVIPPHKAVPXTGPRSRPASGPAGT-PDSQ*GTAVGRPPSP 243
G PV PP P PA GP T P S GTA PP P
Sbjct: 1373 GAEAPLPVPPPTGTAAAPAPTPSPAGGPDPTSPSSDSGTAQAAPPLP 1419
>J05070-1|AAA51539.1| 707|Homo sapiens CLG4A protein.
Length = 707
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +1
Query: 121 CPVIPP--HKAV-PXTGPRSRPASGPAGTPDSQ*GTAVGRPPSP 243
CP PP H + P GP P++GP G P + TA P SP
Sbjct: 468 CPTGPPTVHPSERPTAGPTGPPSAGPTGPPTAGPSTATTVPLSP 511
>DQ194553-1|ABA03169.1| 707|Homo sapiens matrix metallopeptidase 9
(gelatinase B, 92kDa gelatinase, 92kDa type IV collag
protein.
Length = 707
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +1
Query: 121 CPVIPP--HKAV-PXTGPRSRPASGPAGTPDSQ*GTAVGRPPSP 243
CP PP H + P GP P++GP G P + TA P SP
Sbjct: 468 CPTGPPTVHPSERPTAGPTGPPSAGPTGPPTAGPSTATTVPLSP 511
>BC006093-1|AAH06093.1| 707|Homo sapiens matrix metallopeptidase 9
(gelatinase B, 92kDa gelatinase, 92kDa type IV collag
protein.
Length = 707
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +1
Query: 121 CPVIPP--HKAV-PXTGPRSRPASGPAGTPDSQ*GTAVGRPPSP 243
CP PP H + P GP P++GP G P + TA P SP
Sbjct: 468 CPTGPPTVHPSERPTAGPTGPPSAGPTGPPTAGPSTATTVPLSP 511
>AL162458-5|CAC10459.1| 707|Homo sapiens matrix metallopeptidase 9
(gelatinase B, 92kDa gelatinase, 92kDa type IV collag
protein.
Length = 707
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +1
Query: 121 CPVIPP--HKAV-PXTGPRSRPASGPAGTPDSQ*GTAVGRPPSP 243
CP PP H + P GP P++GP G P + TA P SP
Sbjct: 468 CPTGPPTVHPSERPTAGPTGPPSAGPTGPPTAGPSTATTVPLSP 511
>AF538844-1|AAM97934.1| 707|Homo sapiens matrix metalloproteinase 9
(gelatinase B, 92kD gelatinase, 92kD type IV collage
protein.
Length = 707
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +1
Query: 121 CPVIPP--HKAV-PXTGPRSRPASGPAGTPDSQ*GTAVGRPPSP 243
CP PP H + P GP P++GP G P + TA P SP
Sbjct: 468 CPTGPPTVHPSERPTAGPTGPPSAGPTGPPTAGPSTATTVPLSP 511
>D85511-1|BAA22226.1| 607|Homo sapiens MT3-MMP protein.
Length = 607
Score = 31.9 bits (69), Expect = 2.7
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +1
Query: 124 PVIPPHKAVPXTGPRSRPASGPAGTPDSQ*GTAVGRPPSPGINTRCVSSHWN 279
P +PPH+++P PR P P GRP PG ++N
Sbjct: 304 PTVPPHRSIPPADPRKNDRPKPPRPP-------TGRPSYPGAKPNICDGNFN 348
>D83647-1|BAA12023.1| 457|Homo sapiens metalloproteinase protein.
Length = 457
Score = 31.9 bits (69), Expect = 2.7
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +1
Query: 124 PVIPPHKAVPXTGPRSRPASGPAGTPDSQ*GTAVGRPPSPGINTRCVSSHWN 279
P +PPH+++P PR P P GRP PG ++N
Sbjct: 304 PTVPPHRSIPPADPRKNDRPKPPRPP-------TGRPSYPGAKPNICDGNFN 348
>D83646-1|BAA12022.1| 607|Homo sapiens metalloproteinase protein.
Length = 607
Score = 31.9 bits (69), Expect = 2.7
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +1
Query: 124 PVIPPHKAVPXTGPRSRPASGPAGTPDSQ*GTAVGRPPSPGINTRCVSSHWN 279
P +PPH+++P PR P P GRP PG ++N
Sbjct: 304 PTVPPHRSIPPADPRKNDRPKPPRPP-------TGRPSYPGAKPNICDGNFN 348
>DQ003082-1|AAX84515.1| 607|Homo sapiens matrix metalloproteinase
16 (membrane-inserted) protein.
Length = 607
Score = 31.9 bits (69), Expect = 2.7
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +1
Query: 124 PVIPPHKAVPXTGPRSRPASGPAGTPDSQ*GTAVGRPPSPGINTRCVSSHWN 279
P +PPH+++P PR P P GRP PG ++N
Sbjct: 304 PTVPPHRSIPPADPRKNDRPKPPRPP-------TGRPSYPGAKPNICDGNFN 348
>BC075005-1|AAH75005.1| 607|Homo sapiens matrix metallopeptidase 16
(membrane-inserted) protein.
Length = 607
Score = 31.9 bits (69), Expect = 2.7
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +1
Query: 124 PVIPPHKAVPXTGPRSRPASGPAGTPDSQ*GTAVGRPPSPGINTRCVSSHWN 279
P +PPH+++P PR P P GRP PG ++N
Sbjct: 304 PTVPPHRSIPPADPRKNDRPKPPRPP-------TGRPSYPGAKPNICDGNFN 348
>BC075004-1|AAH75004.1| 607|Homo sapiens matrix metallopeptidase 16
(membrane-inserted) protein.
Length = 607
Score = 31.9 bits (69), Expect = 2.7
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +1
Query: 124 PVIPPHKAVPXTGPRSRPASGPAGTPDSQ*GTAVGRPPSPGINTRCVSSHWN 279
P +PPH+++P PR P P GRP PG ++N
Sbjct: 304 PTVPPHRSIPPADPRKNDRPKPPRPP-------TGRPSYPGAKPNICDGNFN 348
>BC069500-1|AAH69500.1| 607|Homo sapiens matrix metallopeptidase 16
(membrane-inserted) protein.
Length = 607
Score = 31.9 bits (69), Expect = 2.7
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +1
Query: 124 PVIPPHKAVPXTGPRSRPASGPAGTPDSQ*GTAVGRPPSPGINTRCVSSHWN 279
P +PPH+++P PR P P GRP PG ++N
Sbjct: 304 PTVPPHRSIPPADPRKNDRPKPPRPP-------TGRPSYPGAKPNICDGNFN 348
>AB009303-1|BAA23742.1| 607|Homo sapiens membrane-type matrix
metalloproteinase 3 protein.
Length = 607
Score = 31.9 bits (69), Expect = 2.7
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +1
Query: 124 PVIPPHKAVPXTGPRSRPASGPAGTPDSQ*GTAVGRPPSPGINTRCVSSHWN 279
P +PPH+++P PR P P GRP PG ++N
Sbjct: 304 PTVPPHRSIPPADPRKNDRPKPPRPP-------TGRPSYPGAKPNICDGNFN 348
>BC139924-1|AAI39925.1| 584|Homo sapiens SMARCA4 protein protein.
Length = 584
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +1
Query: 115 GDCPVIPPHKAVPXTGPRSRPASGPAGTPDSQ*GTAVGRPPSP 243
G P P H G + P GP+G P G G PP P
Sbjct: 241 GPGPAPPNHSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKP 283
>BC139917-1|AAI39918.1| 584|Homo sapiens SMARCA4 protein protein.
Length = 584
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +1
Query: 115 GDCPVIPPHKAVPXTGPRSRPASGPAGTPDSQ*GTAVGRPPSP 243
G P P H G + P GP+G P G G PP P
Sbjct: 241 GPGPAPPNHSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKP 283
>AY044449-1|AAK95951.1| 1907|Homo sapiens muscle alpha-kinase protein.
Length = 1907
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Frame = +1
Query: 115 GDCPV------IPPHKAVPXTGPRSRPASGPAGTPDSQ*GTAVGRPPS 240
G CP+ +P ++P TG + P +GP TP SQ G+ PS
Sbjct: 1055 GGCPLAGLSQEVPTMPSLPGTGLTASPKAGPCSTPTSQHGSTATFLPS 1102
>AF012303-1|AAC33409.1| 124|Homo sapiens nuclear mitotic apparatus
protein protein.
Length = 124
Score = 31.5 bits (68), Expect = 3.6
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +1
Query: 67 VSLPRLDYEAVVLGVVGDCPVIPPHKAVPXT-----GPRSRPASGPAG 195
+SLP + AV+L V CPV PP + + T GP P GP G
Sbjct: 59 LSLPDAHHSAVLLVVPAGCPVGPPGEGLLKTQSRICGPMPPPWKGPLG 106
>AB037751-1|BAA92568.1| 945|Homo sapiens KIAA1330 protein protein.
Length = 945
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Frame = +1
Query: 115 GDCPV------IPPHKAVPXTGPRSRPASGPAGTPDSQ*GTAVGRPPS 240
G CP+ +P ++P TG + P +GP TP SQ G+ PS
Sbjct: 93 GGCPLAGLSQEVPTMPSLPGTGLTASPKAGPCSTPTSQHGSTATFLPS 140
>Z46389-1|CAA86523.1| 380|Homo sapiens vasodilator-stimulated
phosphoprotein (VASP) protein.
Length = 380
Score = 31.1 bits (67), Expect = 4.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 133 PPHKAVPXTGPRSRPASGPAGTPDSQ*GTAVGRPPSP 243
PP P GP P P+G P + G G PP+P
Sbjct: 172 PPPGPPPPPGPPPPPGLPPSGVPAAAHGAGGGPPPAP 208
>X98534-1|CAA67147.2| 378|Homo sapiens vasodilator-stimulated
phosphoprotein protein.
Length = 378
Score = 31.1 bits (67), Expect = 4.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 133 PPHKAVPXTGPRSRPASGPAGTPDSQ*GTAVGRPPSP 243
PP P GP P P+G P + G G PP+P
Sbjct: 170 PPPGPPPPPGPPPPPGLPPSGVPAAAHGAGGGPPPAP 206
>BC038224-1|AAH38224.1| 380|Homo sapiens vasodilator-stimulated
phosphoprotein protein.
Length = 380
Score = 31.1 bits (67), Expect = 4.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 133 PPHKAVPXTGPRSRPASGPAGTPDSQ*GTAVGRPPSP 243
PP P GP P P+G P + G G PP+P
Sbjct: 172 PPPGPPPPPGPPPPPGLPPSGVPAAAHGAGGGPPPAP 208
>BC026019-1|AAH26019.1| 380|Homo sapiens vasodilator-stimulated
phosphoprotein protein.
Length = 380
Score = 31.1 bits (67), Expect = 4.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 133 PPHKAVPXTGPRSRPASGPAGTPDSQ*GTAVGRPPSP 243
PP P GP P P+G P + G G PP+P
Sbjct: 173 PPPGPPPPPGPPPPPGLPPSGVPAAAHGAGGGPPPAP 209
>BC025959-1|AAH25959.1| 492|Homo sapiens dynein, cytoplasmic 1,
light intermediate chain 2 protein.
Length = 492
Score = 31.1 bits (67), Expect = 4.8
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 151 PXTGPRSRPASGPAGTPDSQ*GTAVGRPPSPGINTRCVS 267
P PR++ GPA P S GT+V + P P I S
Sbjct: 388 PSGSPRTQGRGGPASVPSSSPGTSV-KKPDPNIKNNAAS 425
>AY046538-1|AAL03971.1| 388|Homo sapiens retina specific regulator
of G-protein signaling splice variant 6 protein.
Length = 388
Score = 31.1 bits (67), Expect = 4.8
Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +2
Query: 104 SGLSATVPLFPHTRRSPXPVHVRVQLQALPVLPILNEEQLLVAHLHRV*IPG-VSLLTG- 277
S LS+ F H R P P R +L P+LP L +L H +PG +SLL G
Sbjct: 77 SPLSSLARFFSHLLRRPPPEAPRRRLDFSPLLPALPAARLSRGHEE---LPGRLSLLLGA 133
Query: 278 IIRSPGLP 301
+ PG P
Sbjct: 134 ALALPGRP 141
>AF035812-1|AAB88513.1| 492|Homo sapiens dynein light intermediate
chain 2 protein.
Length = 492
Score = 31.1 bits (67), Expect = 4.8
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 151 PXTGPRSRPASGPAGTPDSQ*GTAVGRPPSPGINTRCVS 267
P PR++ GPA P S GT+V + P P I S
Sbjct: 388 PSGSPRTQGRGGPASVPSSSPGTSV-KKPDPNIKNNAAS 425
>U79754-1|AAF21464.1| 600|Homo sapiens proline oxidase 2 protein.
Length = 600
Score = 30.7 bits (66), Expect = 6.3
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +1
Query: 157 TGPRSR--PASGPAGTPDSQ*GTAVGRPPSPGIN 252
T P SR PA+GPA P TAV RPP P ++
Sbjct: 22 TAPASREQPAAGPAAVPGGGSATAV-RPPVPAVD 54
>D29677-1|BAA06147.2| 1943|Homo sapiens KIAA0054 protein.
Length = 1943
Score = 30.3 bits (65), Expect = 8.4
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 100 VLGVVGDCPVIPPHKAVPXTGPRSRPASGPAGTPDSQ*GTAVGRPPSP 243
VL +G P + P+K + + S P S G P +A+ PP P
Sbjct: 1860 VLQHLGQFPPLMPNKQIAESANSSSPQSSAGGKPAMSYASALRAPPKP 1907
>BC130582-1|AAI30583.1| 1942|Homo sapiens helicase with zinc finger
protein.
Length = 1942
Score = 30.3 bits (65), Expect = 8.4
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 100 VLGVVGDCPVIPPHKAVPXTGPRSRPASGPAGTPDSQ*GTAVGRPPSP 243
VL +G P + P+K + + S P S G P +A+ PP P
Sbjct: 1859 VLQHLGQFPPLMPNKQIAESANSSSPQSSAGGKPAMSYASALRAPPKP 1906
>AK057719-1|BAB71551.1| 195|Homo sapiens protein ( Homo sapiens
cDNA FLJ33157 fis, clone UTERU2000393. ).
Length = 195
Score = 30.3 bits (65), Expect = 8.4
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +1
Query: 115 GDCPVIPPHKAVPXTG-PRSRPASGP 189
G P +PPH+AVP G P ++ +SGP
Sbjct: 107 GQRPRLPPHRAVPGKGSPSAKCSSGP 132
>AF009040-1|AAC51922.1| 1575|Homo sapiens synaptojanin protein.
Length = 1575
Score = 30.3 bits (65), Expect = 8.4
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 124 PVIPPHKAVPXTGPRSRPASGPAGTPDSQ*GTAVGRPPSPGINTR 258
PV PP + P P P+ + P + +G PPSPG+ R
Sbjct: 1113 PVAPPTRPAPPQRPPP-PSGARSPAPTRKEFGGIGAPPSPGVARR 1156
>AF009039-1|AAC51921.1| 1311|Homo sapiens synaptojanin protein.
Length = 1311
Score = 30.3 bits (65), Expect = 8.4
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 124 PVIPPHKAVPXTGPRSRPASGPAGTPDSQ*GTAVGRPPSPGINTR 258
PV PP + P P P+ + P + +G PPSPG+ R
Sbjct: 1113 PVAPPTRPAPPQRPPP-PSGARSPAPTRKEFGGIGAPPSPGVARR 1156
>AE006465-11|AAK61265.1| 436|Homo sapiens unknown protein.
Length = 436
Score = 30.3 bits (65), Expect = 8.4
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 121 CPVIPPHKAVPXTGPRSRPASGPAGTPDSQ*GTAVGRPPSPG 246
CP +PPH + P G ++ P P G A PP G
Sbjct: 164 CPAVPPHPSAPDAGSQAEGQEDPV-APARLPGPAPPSPPLAG 204
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,138,870
Number of Sequences: 237096
Number of extensions: 2713549
Number of successful extensions: 8610
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 7429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8564
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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