Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_N09
(795 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g32040.1 68415.m03914 integral membrane transporter family pr... 31 1.2
At2g15640.1 68415.m01791 F-box family protein contains Pfam PF00... 30 1.5
At3g61690.1 68416.m06913 expressed protein 30 2.0
At5g47850.1 68418.m05912 protein kinase, putative contains simil... 29 2.7
At5g44150.1 68418.m05403 expressed protein 29 3.6
At5g01280.1 68418.m00037 expressed protein 29 3.6
At2g25940.1 68415.m03113 vacuolar processing enzyme alpha / alph... 29 3.6
At5g66150.1 68418.m08333 glycosyl hydrolase family 38 protein si... 28 6.2
At3g44340.1 68416.m04764 sec23/sec24 transport family protein co... 28 6.2
At4g19230.2 68417.m02837 cytochrome P450 family protein cytochro... 28 8.2
At4g19230.1 68417.m02836 cytochrome P450 family protein cytochro... 28 8.2
At1g12500.1 68414.m01447 phosphate translocator-related low simi... 28 8.2
>At2g32040.1 68415.m03914 integral membrane transporter family
protein contains 9 transmembrane domains; contains Pfam
PF03092: BT1 family; contains TIGRFAMS TIGR00788:
folate/biopterin transporter; similar to high affinity
folic acid/methotrexate transporter 5 (GI:21898554)
[Leishmania tarentolae]
Length = 560
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 59 VEGFHCHGWIMKP*YSGLSATVPLFPHTRRS 151
+ G W++KP Y +S +VPLF + RRS
Sbjct: 165 ITGLSSLPWLVKPLYGFISDSVPLFGYRRRS 195
>At2g15640.1 68415.m01791 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640 :
F-box protein interaction domain
Length = 426
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/49 (22%), Positives = 28/49 (57%)
Frame = -3
Query: 391 WENNNVIFKILNTEHEMYLKLDVNVDRYGDRKTWGSNDSSEKRHTWYLY 245
WE++ I+K+ ++ + Y++ ++N D + + W D +++ + Y Y
Sbjct: 278 WEDDVDIYKLYYSDVDEYVEYNINDDDINELRVWVLEDVKKQQWSKYAY 326
>At3g61690.1 68416.m06913 expressed protein
Length = 1303
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 612 RTNCGTRATRTSSKITSRANSNSYSTKRELNSS 514
+ NCGT T + T ++ NSY +E+NS+
Sbjct: 434 QNNCGTEITSRVTYQTQKSRGNSYQPAQEVNSN 466
>At5g47850.1 68418.m05912 protein kinase, putative contains
similarity to cytokinin-regulated kinase 1 [Nicotiana
tabacum] gi|10998537|gb|AAG25966; contains protein
kinase domain, Pfam:PF00069
Length = 751
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 147 GPRYRSTFASSFRPCRYSRFSMRNSCWSPTF 239
GP A +FR C R S R CW P +
Sbjct: 122 GPELEELEAGNFRICGVERVSRRLRCWQPYY 152
>At5g44150.1 68418.m05403 expressed protein
Length = 355
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -3
Query: 331 LDVNVDRYGDRKTWGSNDSSEKRHTWYLYPVKVGDQQLFLIENREYRQGLKLDANVD 161
L N DRY D + DSS H+ + P G L LI + K++ N+D
Sbjct: 57 LPSNWDRYDDELD-AAEDSSISLHSDVIVPKSKGADYLHLISEAQAESNSKIENNLD 112
>At5g01280.1 68418.m00037 expressed protein
Length = 460
Score = 29.1 bits (62), Expect = 3.6
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Frame = -1
Query: 627 TPCRSRTNCGTRATRTSSKITS--RANSNSYSTKRELNSSATITIKLSNWMLTLTGTKTA 454
TP T+ TRAT TSS TS R+ S S+ S T+T + T T +T
Sbjct: 113 TPTSRATSTTTRATLTSSSTTSSTRSWSRPSSSSGTGTSRVTLTAARATRPTTSTDQQTT 172
Query: 453 *PGEMEKTTPATESAGDSSLFGKTTTSSSR 364
++ SA +S +++T + R
Sbjct: 173 GSATSTRSNNRPMSAPNSKPGSRSSTPTRR 202
>At2g25940.1 68415.m03113 vacuolar processing enzyme alpha /
alpha-VPE identical to SP|P49047 Vacuolar processing
enzyme, alpha-isozyme precursor (EC 3.4.22.-)
(Alpha-VPE) {Arabidopsis thaliana}
Length = 478
Score = 29.1 bits (62), Expect = 3.6
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Frame = -3
Query: 562 PSEFQLIL-DQKRIKLIGNHYNQALKLDANVDRYK--DRLTWGDGKDYTSYRVSWRLISL 392
PSE++ L D + I + L+ + ++Y+ + T G GK Y S+ + + I L
Sbjct: 245 PSEYETCLGDLYSVAWIEDSEKHNLQTETLHEQYELVKKRTAGSGKSYGSHVMEFGDIGL 304
Query: 391 WENNNVIFKILNTEHEMYLKLDVNVDRYGDRKTWGSNDSSEKRHTWYLY 245
+ V+F N E + ++ N R R T + ++ H W+ Y
Sbjct: 305 SKEKLVLFMGTNPADENFTFVNENSIRPPSRVT--NQRDADLVHFWHKY 351
>At5g66150.1 68418.m08333 glycosyl hydrolase family 38 protein
similar to lysosomal alpha-mannosidase SP:O09159 from
[Mus musculus]
Length = 1047
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -3
Query: 589 HKDIVEDYFPSEFQLILDQKRIKLIGNHYNQALKLDANVDRYKDRLTWGDGKDYT-SYRV 413
H ++ +DY P + D IK N + A + ANV R + + W G D+ +
Sbjct: 250 HYEVTDDYVPLQDNPRFDGYNIKEAVNDFVNASLVYANVSR-GNHVMWTMGDDFQYQFAE 308
Query: 412 SW 407
SW
Sbjct: 309 SW 310
>At3g44340.1 68416.m04764 sec23/sec24 transport family protein
contains Pfam domains PF04811: Sec23/Sec24 trunk domain,
PF04815: Sec23/Sec24 helical domain and PF04810:
Sec23/Sec24 zinc finger
Length = 1096
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +1
Query: 124 PVIPPHKAVPXTG--PRSRPASGPAGTPDSQ*GTAVGRPPSPG 246
P P A P TG P S P + P + G GRPP PG
Sbjct: 251 PYGQPPNAGPFTGNSPLSSPPAHSIPPPTNFPGVPYGRPPMPG 293
>At4g19230.2 68417.m02837 cytochrome P450 family protein cytochrome
P450, Arabidopsis thaliana; supported by cDNA:
gi_15293092_gb_AY050980.1_
Length = 484
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -3
Query: 436 KDYTSYRVSWRLISLWENNNVIFKILNTEHEMYLKLDVNVDRYGDRKTWG 287
+D T+ +SW L L EN NV+ + TE +M ++ D G+ TWG
Sbjct: 277 RDTTASVMSWILKYLAENPNVLEAV--TEEQMAIRKD---KEEGESLTWG 321
>At4g19230.1 68417.m02836 cytochrome P450 family protein cytochrome
P450, Arabidopsis thaliana; supported by cDNA:
gi_15293092_gb_AY050980.1_
Length = 467
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -3
Query: 436 KDYTSYRVSWRLISLWENNNVIFKILNTEHEMYLKLDVNVDRYGDRKTWG 287
+D T+ +SW L L EN NV+ + TE +M ++ D G+ TWG
Sbjct: 277 RDTTASVMSWILKYLAENPNVLEAV--TEEQMAIRKD---KEEGESLTWG 321
>At1g12500.1 68414.m01447 phosphate translocator-related low
similarity to glucose-6-phosphate/phosphate-translocator
precursor [Zea mays] GI:2997589,
phosphoenolpyruvate/phosphate translocator precursor
[Mesembryanthemum crystallinum] GI:9295275,
SP|P21727|CPTR_PEA Triose phosphate/phosphate
translocator, chloroplast precursor (CTPT) {Pisum
sativum}
Length = 361
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 61 RRVSLPRLDYEAVVLGVVGDCPVIPPHKA 147
RR+S PR D A + D P PPH +
Sbjct: 10 RRMSNPRFDAAATAAPTIVDIPGTPPHSS 38
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,596,362
Number of Sequences: 28952
Number of extensions: 370083
Number of successful extensions: 1137
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1794809600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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