Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_N08
         (802 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    25   0.70 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   2.1  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   2.1  

>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 25.0 bits (52), Expect = 0.70
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 660 HGEEQKKNEIASFQHLSYYSPHDNLERKKYI 568
           H  +   +E    QHL  +  HD LER+ +I
Sbjct: 115 HQSKFNPHEEVKLQHLHQFPHHDFLEREGFI 145


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -1

Query: 202 DVYYFSFYIRFQSTLE-RSILYICYCKNESII 110
           D +YFSFYI   + L   S+  I   +N S++
Sbjct: 54  DYFYFSFYITSYTLLSVYSLFRIATNENNSLV 85


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -1

Query: 202 DVYYFSFYIRFQSTLE-RSILYICYCKNESII 110
           D +YFSFYI   + L   S+  I   +N S++
Sbjct: 54  DYFYFSFYITSYTLLSVYSLFRIATNENNSLV 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,551
Number of Sequences: 336
Number of extensions: 4568
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)