Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_N08
         (802 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_42543| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.3  
SB_24994| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.7  

>SB_42543| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 393

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 16/57 (28%), Positives = 29/57 (50%)
 Frame = -3

Query: 656 AKNKKKTKSLLFSIFHIIAHMIIWKEKNIYIFVSFHFF*SSLKSQRFYRSFTSIYTF 486
           A++ K+T+ +L S   ++ H  +  + NIYI +    +    K +RFY   T  + F
Sbjct: 261 ARSSKRTEGVLLSTVDLVKHDGLQPDANIYIAILGKVY-DVEKGRRFYGPGTGYHVF 316


>SB_24994| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1122

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 461 PPKFHFTPFGVIYPGSPTVAICP 393
           P +F F+P+G + P SP    CP
Sbjct: 757 PNRFQFSPYGRVTPDSPGFIECP 779


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,031,096
Number of Sequences: 59808
Number of extensions: 464720
Number of successful extensions: 1058
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2215746665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)