Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_N07
(749 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1481 + 26860051-26860104,26861114-26861143,26861714-26863174 187 7e-48
02_02_0581 + 11770511-11770527,11770754-11771612,11771652-117717... 32 0.56
09_04_0371 - 17020539-17020607,17020697-17020747,17020888-170210... 31 0.98
09_04_0082 + 14408962-14409436,14413356-14413780,14414067-14414528 31 0.98
03_03_0107 + 14504065-14504448,14504545-14504922,14506011-145066... 30 1.7
02_02_0652 - 12651163-12653210,12653327-12653627 29 5.2
01_06_1475 + 37634831-37636297 29 5.2
07_01_0615 + 4551557-4551835 28 9.1
05_06_0186 - 26207298-26208548,26208743-26208853,26209286-262095... 28 9.1
02_05_0312 - 27792127-27792360,27793282-27793412,27793534-27793837 28 9.1
01_01_0195 + 1697447-1697691,1698150-1698808,1699754-1701570,170... 28 9.1
>07_03_1481 + 26860051-26860104,26861114-26861143,26861714-26863174
Length = 514
Score = 187 bits (456), Expect = 7e-48
Identities = 86/119 (72%), Positives = 98/119 (82%)
Frame = -3
Query: 558 DSVDDFDXLVAAQTSLGTAAIIVMDKSTDIVKAIARLIMFYKHESCGQCTPCREGVSWMN 379
D + D+D L A Q+ LGTAA+IVMDKSTD+V AIARL FYKHESCGQCTPCREG W+
Sbjct: 385 DVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 444
Query: 378 KIIYRFVDGNASPKEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQE 202
I+ R GNA +EIDML E++KQIEGHTICALGD AAWPVQGLIRHFRPELERR++E
Sbjct: 445 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRE 503
Score = 48.0 bits (109), Expect = 8e-06
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = -1
Query: 644 GGVXRGXENLXAIIPGGSLTPXIPKNVCETVLM 546
GGV G +NL AIIPGGS P +PK++C+ VLM
Sbjct: 356 GGVRGGWDNLLAIIPGGSSVPLLPKHICDDVLM 388
>02_02_0581 +
11770511-11770527,11770754-11771612,11771652-11771749,
11772903-11773631,11775159-11775231,11775698-11776066,
11777009-11777038
Length = 724
Score = 31.9 bits (69), Expect = 0.56
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = -1
Query: 329 TCCGKFRNKSKGTRSALWATEPRGRCRDSYVTSGPSSSDACRSTRPRTGRAKPSACTSSA 150
T + R K K TRS L + +G + GPS++DA T P +G A +A +
Sbjct: 632 TARSEMRGKRKRTRSKLQQSRGQGCWPIAIHVIGPSTADARHPTAPLSGAAAAAAAIQAT 691
Query: 149 IRA 141
A
Sbjct: 692 TAA 694
>09_04_0371 -
17020539-17020607,17020697-17020747,17020888-17021058,
17023296-17023404,17023570-17023676,17024429-17024640,
17024805-17024952
Length = 288
Score = 31.1 bits (67), Expect = 0.98
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = -3
Query: 441 FYKHESCGQCTPCREGVSW--MNKIIYRFVDGNASPKEIDMLWEISKQIE 298
+Y+++ PC EGV W M+KI G+AS ++ID+L ++ +E
Sbjct: 226 YYRYDGSLTTPPCTEGVIWTIMSKI------GDASKEQIDLLKTVATTVE 269
>09_04_0082 + 14408962-14409436,14413356-14413780,14414067-14414528
Length = 453
Score = 31.1 bits (67), Expect = 0.98
Identities = 23/89 (25%), Positives = 39/89 (43%)
Frame = -1
Query: 356 MVMLHRKKSTCCGKFRNKSKGTRSALWATEPRGRCRDSYVTSGPSSSDACRSTRPRTGRA 177
+++L +K+ST R G+R + RG S+ + G +S + ST A
Sbjct: 352 VIILSKKQSTLEEPTRPGVPGSRYRRRSYGTRGGGGGSHFSVGSTSGTSSPSTSTTASHA 411
Query: 176 KPSACTSSAIRAERQLFTLRVSKEPLYRE 90
SA +++ T+R PL+RE
Sbjct: 412 TTSAASNAMTTTTSSTHTMRSQGLPLHRE 440
>03_03_0107 +
14504065-14504448,14504545-14504922,14506011-14506619,
14507110-14507237,14507829-14507832
Length = 500
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -3
Query: 300 EGHTICALGDGAAWPVQGLIRHFRPELERRMQEYSAAHGPSKAERL 163
EG T+C + A PV+ + R P++ R + E +HG S+ E L
Sbjct: 148 EGRTMCKVAAKTA-PVRRIERAVDPDIARLLDETDVSHGGSEDEGL 192
>02_02_0652 - 12651163-12653210,12653327-12653627
Length = 782
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +3
Query: 144 AYCTTSTGARLCSA---RARPSTPACVARARAGSDV*VPAPATRLR 272
+Y TT++GA+ A R P+T A +A + + + + PAP+T +
Sbjct: 123 SYATTTSGAKSIPAATERVFPATKASLASSTSSTTMTTPAPSTETK 168
>01_06_1475 + 37634831-37636297
Length = 488
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -1
Query: 287 SALWATEPRGRCRDSYVTSGPSSSDACRSTRPRTGRAKPSAC 162
+A AT P R + V P + DAC+ P+T A S C
Sbjct: 126 TACGATAPFNPVRSTTVADVPCTDDACQQFAPQTCGAGASEC 167
>07_01_0615 + 4551557-4551835
Length = 92
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 227 PSSSDACRSTRPRTGRAKPSACTSSAIR 144
PS++ AC RTG +P AC S +R
Sbjct: 55 PSAAGACSCCCLRTGSRQPGACCCSPLR 82
>05_06_0186 -
26207298-26208548,26208743-26208853,26209286-26209507,
26209623-26209658
Length = 539
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -1
Query: 236 TSGPSSSDACRSTRPRTGRAKPSACTSSAIRAERQLFT 123
+SG S T ++GRA PS C +A+ ++Q+F+
Sbjct: 273 SSGNSLFSPFSFTVQKSGRALPSPCLRTALSCKQQMFS 310
>02_05_0312 - 27792127-27792360,27793282-27793412,27793534-27793837
Length = 222
Score = 27.9 bits (59), Expect = 9.1
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = -1
Query: 293 TRSALWATEPRGRCRDSYVTSGPSSSDACRSTRPRTGRAKPSACTSSAIRAERQLFTLRV 114
T S+L+ P + S PS+S A S R R +PS ++A++AE Q
Sbjct: 3 TASSLFLASPVATAPTARARSTPSASPARPSLRLR----RPSTLAAAAVQAEHQPAVAAA 58
Query: 113 SKEP 102
K P
Sbjct: 59 PKPP 62
>01_01_0195 +
1697447-1697691,1698150-1698808,1699754-1701570,
1701700-1701771
Length = 930
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 108 LRYSQSEELTFGAYCTTSTGARLCSARARPSTPAC 212
LRYS S L FG + GA +C +P+ C
Sbjct: 580 LRYSISTMLNFGIFGMPMVGADICGFYPQPTEELC 614
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,874,713
Number of Sequences: 37544
Number of extensions: 358049
Number of successful extensions: 1172
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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