BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_N07 (749 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Y17379-1|CAA76757.1| 464|Homo sapiens NADH:ubiquinone oxidoredu... 220 4e-57 CR456739-1|CAG33020.1| 464|Homo sapiens NDUFV1 protein. 220 4e-57 BC015645-1|AAH15645.1| 464|Homo sapiens NADH dehydrogenase (ubi... 220 4e-57 BC008146-1|AAH08146.1| 455|Homo sapiens NDUFV1 protein protein. 220 4e-57 BC007619-1|AAH07619.1| 354|Homo sapiens Unknown (protein for IM... 220 4e-57 AK223061-1|BAD96781.1| 464|Homo sapiens NADH dehydrogenase (ubi... 220 4e-57 AF053070-1|AAC39722.1| 464|Homo sapiens NADH:ubiquinone dehydro... 220 4e-57 AF053069-1|AAC39750.1| 464|Homo sapiens NADH:ubiquinone dehydro... 220 4e-57 S67973-1|AAB29698.2| 257|Homo sapiens NADH:ubiquinone oxidoredu... 41 0.005 AJ296168-1|CAC27563.1| 106|Homo sapiens keratin associated prot... 30 7.7 >Y17379-1|CAA76757.1| 464|Homo sapiens NADH:ubiquinone oxidoreductase 51-kD subunit protein. Length = 464 Score = 220 bits (538), Expect = 4e-57 Identities = 100/125 (80%), Positives = 108/125 (86%) Frame = -3 Query: 546 DFDXLVAAQTSLGTAAIIVMDKSTDIVKAIARLIMFYKHESCGQCTPCREGVSWMNKIIY 367 DFD LV AQT LGTAA+IVMD+STDIVKAIARLI FYKHESCGQCTPCREGV WMNK++ Sbjct: 338 DFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMA 397 Query: 366 RFVDGNASPKEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQEYSAAH 187 RFV G+A P EID LWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELE RMQ ++ H Sbjct: 398 RFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQRFAQQH 457 Query: 186 GPSKA 172 +A Sbjct: 458 QARQA 462 Score = 47.6 bits (108), Expect = 5e-05 Identities = 22/33 (66%), Positives = 25/33 (75%) Frame = -1 Query: 644 GGVXRGXENLXAIIPGGSLTPXIPKNVCETVLM 546 G V G + L A+IPGGS TP IPK+VCETVLM Sbjct: 305 GFVTGGWDYLLAVIPGGSSTPLIPKSVCETVLM 337 >CR456739-1|CAG33020.1| 464|Homo sapiens NDUFV1 protein. Length = 464 Score = 220 bits (538), Expect = 4e-57 Identities = 100/125 (80%), Positives = 108/125 (86%) Frame = -3 Query: 546 DFDXLVAAQTSLGTAAIIVMDKSTDIVKAIARLIMFYKHESCGQCTPCREGVSWMNKIIY 367 DFD LV AQT LGTAA+IVMD+STDIVKAIARLI FYKHESCGQCTPCREGV WMNK++ Sbjct: 338 DFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMA 397 Query: 366 RFVDGNASPKEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQEYSAAH 187 RFV G+A P EID LWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELE RMQ ++ H Sbjct: 398 RFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQRFAQQH 457 Query: 186 GPSKA 172 +A Sbjct: 458 QARQA 462 Score = 54.4 bits (125), Expect = 4e-07 Identities = 24/33 (72%), Positives = 27/33 (81%) Frame = -1 Query: 644 GGVXRGXENLXAIIPGGSLTPXIPKNVCETVLM 546 GGV G +NL A+IPGGS TP IPK+VCETVLM Sbjct: 305 GGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLM 337 >BC015645-1|AAH15645.1| 464|Homo sapiens NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa protein. Length = 464 Score = 220 bits (538), Expect = 4e-57 Identities = 100/125 (80%), Positives = 108/125 (86%) Frame = -3 Query: 546 DFDXLVAAQTSLGTAAIIVMDKSTDIVKAIARLIMFYKHESCGQCTPCREGVSWMNKIIY 367 DFD LV AQT LGTAA+IVMD+STDIVKAIARLI FYKHESCGQCTPCREGV WMNK++ Sbjct: 338 DFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMA 397 Query: 366 RFVDGNASPKEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQEYSAAH 187 RFV G+A P EID LWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELE RMQ ++ H Sbjct: 398 RFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQRFAQQH 457 Query: 186 GPSKA 172 +A Sbjct: 458 QARQA 462 Score = 54.4 bits (125), Expect = 4e-07 Identities = 24/33 (72%), Positives = 27/33 (81%) Frame = -1 Query: 644 GGVXRGXENLXAIIPGGSLTPXIPKNVCETVLM 546 GGV G +NL A+IPGGS TP IPK+VCETVLM Sbjct: 305 GGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLM 337 >BC008146-1|AAH08146.1| 455|Homo sapiens NDUFV1 protein protein. Length = 455 Score = 220 bits (538), Expect = 4e-57 Identities = 100/125 (80%), Positives = 108/125 (86%) Frame = -3 Query: 546 DFDXLVAAQTSLGTAAIIVMDKSTDIVKAIARLIMFYKHESCGQCTPCREGVSWMNKIIY 367 DFD LV AQT LGTAA+IVMD+STDIVKAIARLI FYKHESCGQCTPCREGV WMNK++ Sbjct: 329 DFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMA 388 Query: 366 RFVDGNASPKEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQEYSAAH 187 RFV G+A P EID LWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELE RMQ ++ H Sbjct: 389 RFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQRFAQQH 448 Query: 186 GPSKA 172 +A Sbjct: 449 QARQA 453 Score = 54.4 bits (125), Expect = 4e-07 Identities = 24/33 (72%), Positives = 27/33 (81%) Frame = -1 Query: 644 GGVXRGXENLXAIIPGGSLTPXIPKNVCETVLM 546 GGV G +NL A+IPGGS TP IPK+VCETVLM Sbjct: 296 GGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLM 328 >BC007619-1|AAH07619.1| 354|Homo sapiens Unknown (protein for IMAGE:3355366) protein. Length = 354 Score = 220 bits (538), Expect = 4e-57 Identities = 100/125 (80%), Positives = 108/125 (86%) Frame = -3 Query: 546 DFDXLVAAQTSLGTAAIIVMDKSTDIVKAIARLIMFYKHESCGQCTPCREGVSWMNKIIY 367 DFD LV AQT LGTAA+IVMD+STDIVKAIARLI FYKHESCGQCTPCREGV WMNK++ Sbjct: 228 DFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMA 287 Query: 366 RFVDGNASPKEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQEYSAAH 187 RFV G+A P EID LWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELE RMQ ++ H Sbjct: 288 RFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQRFAQQH 347 Query: 186 GPSKA 172 +A Sbjct: 348 QARQA 352 Score = 54.4 bits (125), Expect = 4e-07 Identities = 24/33 (72%), Positives = 27/33 (81%) Frame = -1 Query: 644 GGVXRGXENLXAIIPGGSLTPXIPKNVCETVLM 546 GGV G +NL A+IPGGS TP IPK+VCETVLM Sbjct: 195 GGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLM 227 >AK223061-1|BAD96781.1| 464|Homo sapiens NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa variant protein. Length = 464 Score = 220 bits (538), Expect = 4e-57 Identities = 100/125 (80%), Positives = 108/125 (86%) Frame = -3 Query: 546 DFDXLVAAQTSLGTAAIIVMDKSTDIVKAIARLIMFYKHESCGQCTPCREGVSWMNKIIY 367 DFD LV AQT LGTAA+IVMD+STDIVKAIARLI FYKHESCGQCTPCREGV WMNK++ Sbjct: 338 DFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMA 397 Query: 366 RFVDGNASPKEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQEYSAAH 187 RFV G+A P EID LWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELE RMQ ++ H Sbjct: 398 RFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQRFAQQH 457 Query: 186 GPSKA 172 +A Sbjct: 458 QARQA 462 Score = 54.4 bits (125), Expect = 4e-07 Identities = 24/33 (72%), Positives = 27/33 (81%) Frame = -1 Query: 644 GGVXRGXENLXAIIPGGSLTPXIPKNVCETVLM 546 GGV G +NL A+IPGGS TP IPK+VCETVLM Sbjct: 305 GGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLM 337 >AF053070-1|AAC39722.1| 464|Homo sapiens NADH:ubiquinone dehydrogenase 51 kDa subunit protein. Length = 464 Score = 220 bits (538), Expect = 4e-57 Identities = 100/125 (80%), Positives = 108/125 (86%) Frame = -3 Query: 546 DFDXLVAAQTSLGTAAIIVMDKSTDIVKAIARLIMFYKHESCGQCTPCREGVSWMNKIIY 367 DFD LV AQT LGTAA+IVMD+STDIVKAIARLI FYKHESCGQCTPCREGV WMNK++ Sbjct: 338 DFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMA 397 Query: 366 RFVDGNASPKEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQEYSAAH 187 RFV G+A P EID LWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELE RMQ ++ H Sbjct: 398 RFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQRFAQQH 457 Query: 186 GPSKA 172 +A Sbjct: 458 QARQA 462 Score = 54.4 bits (125), Expect = 4e-07 Identities = 24/33 (72%), Positives = 27/33 (81%) Frame = -1 Query: 644 GGVXRGXENLXAIIPGGSLTPXIPKNVCETVLM 546 GGV G +NL A+IPGGS TP IPK+VCETVLM Sbjct: 305 GGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLM 337 >AF053069-1|AAC39750.1| 464|Homo sapiens NADH:ubiquinone dehydrogenase 51 kDa subunit protein. Length = 464 Score = 220 bits (538), Expect = 4e-57 Identities = 100/125 (80%), Positives = 108/125 (86%) Frame = -3 Query: 546 DFDXLVAAQTSLGTAAIIVMDKSTDIVKAIARLIMFYKHESCGQCTPCREGVSWMNKIIY 367 DFD LV AQT LGTAA+IVMD+STDIVKAIARLI FYKHESCGQCTPCREGV WMNK++ Sbjct: 338 DFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMA 397 Query: 366 RFVDGNASPKEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQEYSAAH 187 RFV G+A P EID LWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELE RMQ ++ H Sbjct: 398 RFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQRFAQQH 457 Query: 186 GPSKA 172 +A Sbjct: 458 QARQA 462 Score = 54.4 bits (125), Expect = 4e-07 Identities = 24/33 (72%), Positives = 27/33 (81%) Frame = -1 Query: 644 GGVXRGXENLXAIIPGGSLTPXIPKNVCETVLM 546 GGV G +NL A+IPGGS TP IPK+VCETVLM Sbjct: 305 GGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLM 337 >S67973-1|AAB29698.2| 257|Homo sapiens NADH:ubiquinone oxidoreductase flavoprotein 1 subunit protein. Length = 257 Score = 40.7 bits (91), Expect = 0.005 Identities = 17/19 (89%), Positives = 17/19 (89%) Frame = -3 Query: 465 KAIARLIMFYKHESCGQCT 409 KAIARLI FYKH SCGQCT Sbjct: 239 KAIARLIEFYKHASCGQCT 257 >AJ296168-1|CAC27563.1| 106|Homo sapiens keratin associated protein protein. Length = 106 Score = 30.3 bits (65), Expect = 7.7 Identities = 14/37 (37%), Positives = 17/37 (45%) Frame = -1 Query: 254 CRDSYVTSGPSSSDACRSTRPRTGRAKPSACTSSAIR 144 C SY S C++TR RT +PS C S R Sbjct: 61 CCPSYCVSSCCRPQCCQTTRCRTTCCRPSCCVSRCYR 97 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 87,502,086 Number of Sequences: 237096 Number of extensions: 1778058 Number of successful extensions: 4692 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 4292 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4690 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 9015132854 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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