Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_N07
(749 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50109-8|CAA90435.1| 479|Caenorhabditis elegans Hypothetical pr... 214 5e-56
U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical pr... 30 1.5
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical... 29 3.5
AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical... 29 3.5
AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical ... 29 3.5
AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical... 29 3.5
AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical... 29 3.5
AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical ... 29 3.5
Z70752-3|CAA94755.3| 654|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z66497-8|CAA91285.2| 433|Caenorhabditis elegans Hypothetical pr... 28 6.2
AJ745071-1|CAG32977.1| 433|Caenorhabditis elegans core alpha1,3... 28 6.2
U00035-6|AAA50647.1| 315|Caenorhabditis elegans Hypothetical pr... 28 8.1
AM231686-1|CAJ77755.1| 315|Caenorhabditis elegans GDP-4-keto-6-... 28 8.1
>Z50109-8|CAA90435.1| 479|Caenorhabditis elegans Hypothetical
protein C09H10.3 protein.
Length = 479
Score = 214 bits (523), Expect = 5e-56
Identities = 93/116 (80%), Positives = 105/116 (90%)
Frame = -3
Query: 546 DFDXLVAAQTSLGTAAIIVMDKSTDIVKAIARLIMFYKHESCGQCTPCREGVSWMNKIIY 367
DFD LVAAQ+ LGTAA+IVM+K TDIVK IARL +FYKHESCGQCTPCREG +W+NK+++
Sbjct: 349 DFDALVAAQSGLGTAAVIVMNKQTDIVKCIARLSLFYKHESCGQCTPCREGCNWLNKMMW 408
Query: 366 RFVDGNASPKEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQEY 199
RFVDG A P EIDM+WE+SKQIEGHTICALGD AAWPVQGLIRHFRPELERRM E+
Sbjct: 409 RFVDGKAKPSEIDMMWELSKQIEGHTICALGDAAAWPVQGLIRHFRPELERRMAEF 464
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = -1
Query: 644 GGVXRGXENLXAIIPGGSLTPXIPKNVCETVLM 546
GGV G +NL AIIPGGS P +PKNVC+TVLM
Sbjct: 316 GGVIGGWDNLLAIIPGGSSVPLMPKNVCDTVLM 348
>U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical
protein T13H2.5b protein.
Length = 1092
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 156 TSTGARLCSARARPSTPACVARARAGSD 239
T +R CS+ RPS+P+ V R R GSD
Sbjct: 19 TRRPSRPCSSYDRPSSPSVVIRERLGSD 46
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 156 TSTGARLCSARARPSTPACVARARAGSD 239
T +R CS+ RPS+P+ V R R GSD
Sbjct: 1398 TRRPSRPCSSYDRPSSPSVVIRERLGSD 1425
>AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6c protein.
Length = 1245
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 211 ASLELGPEVTYESLHRPRGSVAQSADRVPFDLFRNFPQHVDF 336
A + L P E LH+ +G + + + + DL R+ P+H F
Sbjct: 507 AEMALNPGYYRELLHKNQGVYSVALEEIERDLHRSLPEHPAF 548
>AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical
protein Y45F10A.6a protein.
Length = 1247
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 211 ASLELGPEVTYESLHRPRGSVAQSADRVPFDLFRNFPQHVDF 336
A + L P E LH+ +G + + + + DL R+ P+H F
Sbjct: 507 AEMALNPGYYRELLHKNQGVYSVALEEIERDLHRSLPEHPAF 548
>AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6b protein.
Length = 1245
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 211 ASLELGPEVTYESLHRPRGSVAQSADRVPFDLFRNFPQHVDF 336
A + L P E LH+ +G + + + + DL R+ P+H F
Sbjct: 507 AEMALNPGYYRELLHKNQGVYSVALEEIERDLHRSLPEHPAF 548
>AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6c protein.
Length = 1245
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 211 ASLELGPEVTYESLHRPRGSVAQSADRVPFDLFRNFPQHVDF 336
A + L P E LH+ +G + + + + DL R+ P+H F
Sbjct: 507 AEMALNPGYYRELLHKNQGVYSVALEEIERDLHRSLPEHPAF 548
>AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical
protein Y45F10A.6a protein.
Length = 1247
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 211 ASLELGPEVTYESLHRPRGSVAQSADRVPFDLFRNFPQHVDF 336
A + L P E LH+ +G + + + + DL R+ P+H F
Sbjct: 507 AEMALNPGYYRELLHKNQGVYSVALEEIERDLHRSLPEHPAF 548
>AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6b protein.
Length = 1245
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 211 ASLELGPEVTYESLHRPRGSVAQSADRVPFDLFRNFPQHVDF 336
A + L P E LH+ +G + + + + DL R+ P+H F
Sbjct: 507 AEMALNPGYYRELLHKNQGVYSVALEEIERDLHRSLPEHPAF 548
>Z70752-3|CAA94755.3| 654|Caenorhabditis elegans Hypothetical
protein F25B3.3 protein.
Length = 654
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = -1
Query: 335 KSTCCGKFRNKSKG--TRSALWATEPRGRCRDSYVTSGPSSSDACRSTRPRTGRAKPSAC 162
KS + R KS TR+A W PRG R + + RS+RPRT A ++
Sbjct: 535 KSNAVAECRRKSSSNLTRAAEWFASPRGSMRSRIINT------CKRSSRPRTVSAVVTSP 588
Query: 161 TS 156
T+
Sbjct: 589 TT 590
>Z66497-8|CAA91285.2| 433|Caenorhabditis elegans Hypothetical
protein K08F8.3 protein.
Length = 433
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 350 LPSTNLYIILFIQETPSRQGVHWPQ 424
+P N Y++ F QE+P+ G+ P+
Sbjct: 165 VPKPNQYVVYFSQESPANSGIQIPR 189
>AJ745071-1|CAG32977.1| 433|Caenorhabditis elegans core
alpha1,3-fucosyltransferase protein.
Length = 433
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 350 LPSTNLYIILFIQETPSRQGVHWPQ 424
+P N Y++ F QE+P+ G+ P+
Sbjct: 165 VPKPNQYVVYFSQESPANSGIQIPR 189
>U00035-6|AAA50647.1| 315|Caenorhabditis elegans Hypothetical
protein R01H2.5 protein.
Length = 315
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 304 LFRNFPQHVDFFR*SITIDESVYNLVHPGDTFAARSALA 420
LF N ++ FFR ++ I+++V L H D S L+
Sbjct: 70 LFHNLAHNLQFFRKNMAINDNVLALCHEFDVIKCVSCLS 108
>AM231686-1|CAJ77755.1| 315|Caenorhabditis elegans
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4- reductase
protein.
Length = 315
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 304 LFRNFPQHVDFFR*SITIDESVYNLVHPGDTFAARSALA 420
LF N ++ FFR ++ I+++V L H D S L+
Sbjct: 70 LFHNLAHNLQFFRKNMAINDNVLALCHEFDVIKCVSCLS 108
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,654,260
Number of Sequences: 27780
Number of extensions: 276023
Number of successful extensions: 784
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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