Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_N04
(790 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0040 - 7646525-7647775 34 0.11
03_02_0219 - 6527267-6527437,6528501-6528671,6528776-6529459 34 0.15
05_03_0039 - 7621613-7622695 33 0.34
05_04_0028 + 17302359-17302445,17303887-17303952,17305415-173054... 32 0.45
12_02_0046 + 12830974-12832386 30 1.8
04_03_0904 + 20717005-20718087 30 1.8
09_04_0512 + 18226981-18227143,18227648-18229555,18229649-182302... 30 2.4
05_06_0052 + 25199253-25199304,25199676-25199949,25200709-25201069 29 3.2
05_05_0230 - 23476919-23477372,23477656-23477695,23478578-234787... 29 5.6
07_03_0089 - 13300902-13301645 28 7.4
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 28 7.4
07_03_1164 + 24451808-24451868,24452690-24452923,24453735-244537... 28 9.7
>05_03_0040 - 7646525-7647775
Length = 416
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/90 (23%), Positives = 30/90 (33%), Gaps = 2/90 (2%)
Frame = -2
Query: 738 RPXPRAYSQTSALPRREARPIPGRKTSALXXXXXXXXXXXXXXREASSVPRQGTSARPLP 559
+P P+ Y + P+ E +P P K E P+ P P
Sbjct: 101 KPEPKPYPEPKPEPKPEPKPEPEPKPEPKPEPKPEPKPYPEPKPEPKPEPKPEPKPEPKP 160
Query: 558 RRE--AHPVPSRKGRAVPS*HPRRQAIPSP 475
+ E HP P + P HP + P P
Sbjct: 161 KPEPKPHPEPKPDPKPEPKPHPEPEPKPEP 190
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/88 (20%), Positives = 28/88 (31%)
Frame = -2
Query: 738 RPXPRAYSQTSALPRREARPIPGRKTSALXXXXXXXXXXXXXXREASSVPRQGTSARPLP 559
+P P+ + P + +P P K E P+ P P
Sbjct: 207 KPEPKPEPKPEPKPEPKPKPKPEPKPKPEPKPYPEPKPKPEPKPEPKPEPKPEPKPEPKP 266
Query: 558 RREAHPVPSRKGRAVPS*HPRRQAIPSP 475
+ P P K + P HP+ + P P
Sbjct: 267 EPKPEPKPEPKPKPEPKPHPKPEPKPEP 294
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/88 (19%), Positives = 30/88 (34%)
Frame = -2
Query: 738 RPXPRAYSQTSALPRREARPIPGRKTSALXXXXXXXXXXXXXXREASSVPRQGTSARPLP 559
+P P+ + P+ E +P P + E P+ +P P
Sbjct: 303 KPEPKPEPKPEPEPKPEPKPEPKPEPKPYPEPKPDPKPEPKPHPEPKPEPKPQPEPKPEP 362
Query: 558 RREAHPVPSRKGRAVPS*HPRRQAIPSP 475
+ E P P + + P +P + P P
Sbjct: 363 KPEPKPEPKPEPKPEPKPYPEPKPEPKP 390
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/88 (19%), Positives = 29/88 (32%)
Frame = -2
Query: 738 RPXPRAYSQTSALPRREARPIPGRKTSALXXXXXXXXXXXXXXREASSVPRQGTSARPLP 559
+P P+ + + P+ E +P P + E P+ P P
Sbjct: 161 KPEPKPHPEPKPDPKPEPKPHPEPEPKPEPKPEPKPHPEPEPKPEPKPEPKPEPKPEPKP 220
Query: 558 RREAHPVPSRKGRAVPS*HPRRQAIPSP 475
+ P P K + P +P + P P
Sbjct: 221 EPKPKPKPEPKPKPEPKPYPEPKPKPEP 248
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/88 (20%), Positives = 30/88 (34%)
Frame = -2
Query: 738 RPXPRAYSQTSALPRREARPIPGRKTSALXXXXXXXXXXXXXXREASSVPRQGTSARPLP 559
+P P+ Y + P+ E +P P + E P +P P
Sbjct: 233 KPEPKPYPEPK--PKPEPKPEPKPEPKPEPKPEPKPEPKPEPKPEPKPKPEPKPHPKPEP 290
Query: 558 RREAHPVPSRKGRAVPS*HPRRQAIPSP 475
+ E P P + + P P+ + P P
Sbjct: 291 KPEPKPEPKPEPKPEPKPEPKPEPEPKP 318
>03_02_0219 - 6527267-6527437,6528501-6528671,6528776-6529459
Length = 341
Score = 33.9 bits (74), Expect = 0.15
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Frame = -1
Query: 637 TLTAQCPSMSRS---QFRTPSRYQCPPLTPSR--STSRTQ*KRPCRSQLTSPSTGHTQ-- 479
T+ A P+ RS + R + PPL P + + + KRP S ++ S H++
Sbjct: 4 TMLASVPTRPRSHPFRRRRGAAAAAPPLLPDQIAAAAAAAAKRPAESSTSASSCFHSEVI 63
Query: 478 STSRSTCLCTLRSPYRTQLRYRYQ 407
S + +TC +L + R + R RYQ
Sbjct: 64 SATSTTCPTSLAAAQRPEKRPRYQ 87
>05_03_0039 - 7621613-7622695
Length = 360
Score = 32.7 bits (71), Expect = 0.34
Identities = 20/88 (22%), Positives = 31/88 (35%)
Frame = -2
Query: 738 RPXPRAYSQTSALPRREARPIPGRKTSALXXXXXXXXXXXXXXREASSVPRQGTSARPLP 559
+P P+ Y + P+ E +P P + E P+ G P P
Sbjct: 117 KPEPKPYPEPKPKPKPEPKPEPKPEHKPEPKPEPEPKPYPKPKPE----PKPGPKPEPKP 172
Query: 558 RREAHPVPSRKGRAVPS*HPRRQAIPSP 475
+ HP P + + P HP + P P
Sbjct: 173 EPKPHPEPKPEPKPKPVPHPEPKPEPKP 200
Score = 32.3 bits (70), Expect = 0.45
Identities = 19/88 (21%), Positives = 30/88 (34%)
Frame = -2
Query: 738 RPXPRAYSQTSALPRREARPIPGRKTSALXXXXXXXXXXXXXXREASSVPRQGTSARPLP 559
+P P+ + P+ + P PG K + VP P P
Sbjct: 143 KPEPKPEPEPKPYPKPKPEPKPGPKPEP--KPEPKPHPEPKPEPKPKPVPHPEPKPEPKP 200
Query: 558 RREAHPVPSRKGRAVPS*HPRRQAIPSP 475
+ HP P + + P HP+ + P P
Sbjct: 201 EPKPHPEPKPEPKPEPKLHPKPEPKPHP 228
Score = 32.3 bits (70), Expect = 0.45
Identities = 21/96 (21%), Positives = 30/96 (31%)
Frame = -2
Query: 762 YPVKVHVDRPXPRAYSQTSALPRREARPIPGRKTSALXXXXXXXXXXXXXXREASSVPRQ 583
YP +P P+ + P E +P P K E P+
Sbjct: 155 YPKPKPEPKPGPKPEPKPEPKPHPEPKPEPKPKPVPHPEPKPEPKPEPKPHPEPKPEPKP 214
Query: 582 GTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 475
P P + HP P K + P P+ + P P
Sbjct: 215 EPKLHPKPEPKPHPEPEPKLKPEPKPEPKPEPEPKP 250
>05_04_0028 +
17302359-17302445,17303887-17303952,17305415-17305489,
17305638-17305737,17305819-17305865,17305937-17305994,
17306161-17306210,17306417-17306473,17306561-17306703,
17306793-17306834,17307083-17307124,17308239-17308272,
17308342-17308443,17310373-17310652,17311202-17311332,
17311676-17311773,17312525-17312717
Length = 534
Score = 32.3 bits (70), Expect = 0.45
Identities = 24/84 (28%), Positives = 41/84 (48%)
Frame = -1
Query: 694 SRSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCR 515
SRSP +R ++ +P+K + S S + R+PSR P +P R S + K P +
Sbjct: 224 SRSP-RSRSASRSHSPVKERSRSASQSRSPVKERSPSRSPPPATSPPREKSAS--KSPVK 280
Query: 514 SQLTSPSTGHTQSTSRSTCLCTLR 443
S+ S S + ++ C+ L+
Sbjct: 281 SRSLSRSPSPVRDINQKLCIFRLQ 304
>12_02_0046 + 12830974-12832386
Length = 470
Score = 30.3 bits (65), Expect = 1.8
Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
Frame = -2
Query: 735 PXPRAYSQTSALPRREARPIPGRKTSALXXXXXXXXXXXXXXREASSVPRQG--TSARPL 562
P P + +ALPR+E P P R + + AS RQ T++ P
Sbjct: 180 PAPAPIQEPAALPRQELAPAPPRLEAVI--TQQQATMKMGGSVPASKATRQSCVTASAPP 237
Query: 561 PRREA-HPVPSRKGRAVPS*HPRRQ 490
PRR A P P A + P RQ
Sbjct: 238 PRRVAPQPAPPSLRTAPAAVAPPRQ 262
>04_03_0904 + 20717005-20718087
Length = 360
Score = 30.3 bits (65), Expect = 1.8
Identities = 26/89 (29%), Positives = 30/89 (33%)
Frame = -1
Query: 760 PSKGPCGQTLXPCIFPNQCLTPSRSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSR 581
P+ P T P + Q P +P T PTP YT T PS TP+
Sbjct: 132 PTPAPYTPTPTPPTYKPQ---PKPTPPPTYKPQPKPTPTPYTPTPTPPSYKPQPKPTPTP 188
Query: 580 YQCPPLTPSRSTSRTQ*KRPCRSQLTSPS 494
Y P PS P T PS
Sbjct: 189 YTPTPTPPSYKPQPKPTPTPYTPTPTPPS 217
>09_04_0512 +
18226981-18227143,18227648-18229555,18229649-18230295,
18230710-18231949,18232085-18232419,18232500-18232577,
18232872-18232978,18233020-18233062
Length = 1506
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1
Query: 709 QCLTPSRSPSHTR*KNQCPT 650
QC +P SP+H+R K+ CPT
Sbjct: 373 QCGSPDLSPTHSRNKDPCPT 392
>05_06_0052 + 25199253-25199304,25199676-25199949,25200709-25201069
Length = 228
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 454 TGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 543
+GTC T G+ TGM TG T TG G
Sbjct: 99 SGTCKYPATASGVGTGMGTGTSTGTGTGVG 128
>05_05_0230 -
23476919-23477372,23477656-23477695,23478578-23478700,
23479114-23479151,23479289-23479674,23479875-23481053,
23481805-23481928,23482733-23482779
Length = 796
Score = 28.7 bits (61), Expect = 5.6
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = -1
Query: 715 PNQCLTPSRSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTP-SRSTSR 539
P + TP ++ T K + TP++ TA S S + RT S P TP SRS +
Sbjct: 134 PARSSTPVKTRPSTPTKTRPSTPVRTRQTANSTSDSAAA-RTTSAQNSRPSTPTSRSRAM 192
Query: 538 TQ*KRPCRSQLTSPSTGHTQSTSRS 464
++ P +TSRS
Sbjct: 193 PNSSSGAIPAMSRPGASTISATSRS 217
>07_03_0089 - 13300902-13301645
Length = 247
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/88 (21%), Positives = 29/88 (32%)
Frame = -2
Query: 738 RPXPRAYSQTSALPRREARPIPGRKTSALXXXXXXXXXXXXXXREASSVPRQGTSARPLP 559
+P P+ Q + P + P P K + P + +P P
Sbjct: 133 QPNPKQDPQPNPQPDPKPTPQPDPKQDPQPNPQPSPKADPKPNPKPKPQPEPSPNPKPEP 192
Query: 558 RREAHPVPSRKGRAVPS*HPRRQAIPSP 475
+ E P PS + P+ P Q P P
Sbjct: 193 KPEPKPEPSPNPKPNPNPKPEPQPDPKP 220
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 28.3 bits (60), Expect = 7.4
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = -1
Query: 700 TPSRSPSHTR*KNQCPTPLKYTLTA--QCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*K 527
+PSR P R +++ +PL+Y + PS S+ R+P+ +Q + + R
Sbjct: 467 SPSRYPRRDRSRSRSRSPLRYRERGGYRRPSPRHSRSRSPAEHQRRDVRNRLRSGRDGGG 526
Query: 526 RPCRSQLTSPSTGHTQSTSRSTCLCTLRSP 437
R+ + G ++S S+S RSP
Sbjct: 527 PDHRNSSPPVNRGRSRSRSKSRDPSKSRSP 556
>07_03_1164 +
24451808-24451868,24452690-24452923,24453735-24453768,
24454372-24454627
Length = 194
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 445 SMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 543
+M GT F+ TG G +TG G GT TG G
Sbjct: 126 TMTPGT-FTPGTGMGTTTGTGMGTGTTTGTGLG 157
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,341,832
Number of Sequences: 37544
Number of extensions: 313543
Number of successful extensions: 1260
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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