Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_N04
(790 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42042| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 40 0.002
SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41) 40 0.002
SB_11301| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.086
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 34 0.15
SB_30317| Best HMM Match : Protamine_3 (HMM E-Value=0.091) 34 0.15
SB_57398| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.61
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.61
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_36215| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 31 1.1
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_42365| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_39937| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_12896| Best HMM Match : Plasmodium_HRP (HMM E-Value=1.1) 29 3.2
SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042) 29 3.2
SB_42815| Best HMM Match : rve (HMM E-Value=0.00022) 29 4.3
SB_33207| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_56923| Best HMM Match : PT (HMM E-Value=0.95) 29 5.7
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 29 5.7
SB_27357| Best HMM Match : MFMR (HMM E-Value=3.2) 28 7.5
SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 28 9.9
SB_50810| Best HMM Match : DUF1452 (HMM E-Value=4.9) 28 9.9
SB_45212| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 28 9.9
>SB_42042| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 863
Score = 43.2 bits (97), Expect = 2e-04
Identities = 41/114 (35%), Positives = 50/114 (43%)
Frame = -1
Query: 757 SKGPCGQTLXPCIFPNQCLTPSRSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRY 578
S P Q L C+ PN +T S +PS R PTP +Y PS + + TPSRY
Sbjct: 485 SPPPVTQKLDACV-PNTKVTES-TPS--RYNTPLPTPSRYNTPWSTPSRYNTPWSTPSRY 540
Query: 577 QCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRY 416
P TPSR T P R T ST +T ST +P+ T RY
Sbjct: 541 NTPWSTPSR--YNTPWSTPSRYN-TPWSTPSRYNTPWST-PSRYNTPWSTPSRY 590
Score = 37.1 bits (82), Expect = 0.016
Identities = 35/104 (33%), Positives = 44/104 (42%)
Frame = -1
Query: 727 PCIFPNQCLTPSRSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRS 548
P P++ TP +PS R TP +Y PS + + TPSRY P TPSR
Sbjct: 543 PWSTPSRYNTPWSTPS--RYNTPWSTPSRYNTPWSTPSRYNTPWSTPSRYNTPWSTPSR- 599
Query: 547 TSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRY 416
T P R T ST +T ST +P+ T RY
Sbjct: 600 -YNTPWSTPSRYN-TPWSTPSRYNTPWST-PSRYNTPWSTPSRY 640
Score = 36.7 bits (81), Expect = 0.021
Identities = 23/61 (37%), Positives = 29/61 (47%)
Frame = -1
Query: 727 PCIFPNQCLTPSRSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRS 548
P P++ TP +PS R TP +Y PS + + TPSRY P TPSR
Sbjct: 623 PWSTPSRYNTPWSTPS--RYNTPWSTPSRYNTPWSTPSRYNTPWPTPSRYNTPWSTPSRV 680
Query: 547 T 545
T
Sbjct: 681 T 681
Score = 35.9 bits (79), Expect = 0.037
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = -1
Query: 727 PCIFPNQCLTPSRSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSR 551
P P++ TP +PS R TP +Y PS + + TPSRY P TPSR
Sbjct: 593 PWSTPSRYNTPWSTPS--RYNTPWSTPSRYNTPWSTPSRYNTPWSTPSRYNTPWSTPSR 649
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/58 (43%), Positives = 35/58 (60%)
Frame = -1
Query: 628 AQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCL 455
AQ PS SRS+ R+ SR Q + SRS SR++ + RS+ +S S ++S SRS L
Sbjct: 36 AQSPSGSRSRSRSRSRSQSQSRSRSRSRSRSRSRSRSRSRSSSRSRSRSRSRSRSRSL 93
Score = 35.1 bits (77), Expect = 0.065
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = -1
Query: 694 SRSPSHTR*KNQCPTPLKYTLTAQC--PSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRP 521
SR + +R K Q P+ + ++ S SRS+ R+ SR + + SRS+SR++ +
Sbjct: 26 SRGSNGSRGKAQSPSGSRSRSRSRSRSQSQSRSRSRSRSRSRSRSRSRSRSSSRSRSRSR 85
Query: 520 CRSQLTSPSTGHTQSTSRST 461
RS+ S S G +QST S+
Sbjct: 86 SRSRSRSLSGGSSQSTRNSS 105
Score = 31.5 bits (68), Expect = 0.80
Identities = 23/68 (33%), Positives = 34/68 (50%)
Frame = -1
Query: 616 SMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSP 437
S SR + + Q P + SRS SR++ + RS+ S S ++S SRS RS
Sbjct: 24 SRSRGSNGSRGKAQSPSGSRSRSRSRSRSQSQSRSRSRSRSRSRSRSRSRSRSSSRSRSR 83
Query: 436 YRTQLRYR 413
R++ R R
Sbjct: 84 SRSRSRSR 91
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/80 (28%), Positives = 40/80 (50%)
Frame = -1
Query: 700 TPSRSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRP 521
+PS S S +R +++ + + ++ S SRS+ R+ S + + SRS SR+
Sbjct: 38 SPSGSRSRSRSRSRSQSQSRSRSRSRSRSRSRSRSRSRSSSRSRSRSRSRSRSRSLSGGS 97
Query: 520 CRSQLTSPSTGHTQSTSRST 461
+S S G +ST RS+
Sbjct: 98 SQSTRNSSPAGSKKSTPRSS 117
>SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41)
Length = 1093
Score = 39.9 bits (89), Expect = 0.002
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Frame = -1
Query: 715 PNQCLTPSRS------PSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPS 554
P QC++P ++ PS QC +P K TL CP SQ +P QC ++P
Sbjct: 810 PKQCISPPKNTLKQVCPSQLESPKQCISPPKNTLKQVCP----SQLESPK--QC--ISPL 861
Query: 553 RSTSRTQ*KRPCRSQLTSPS--TGHTQSTSRSTCLCTLRSPYRTQL 422
++T K+ C SQL SP ++T + C L SP ++ L
Sbjct: 862 KNTL----KQVCPSQLESPKQCISPPKNTLKQVCPSQLESPKQSDL 903
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 10/97 (10%)
Frame = -1
Query: 715 PNQCLTPSRS------PSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPS 554
P QC++P ++ PS QC +PLK TL CP SQ +P + PP
Sbjct: 832 PKQCISPPKNTLKQVCPSQLESPKQCISPLKNTLKQVCP----SQLESPKQCISPPKNTL 887
Query: 553 RSTSRTQ*KRPCRSQLTSPST----GHTQSTSRSTCL 455
+ +Q + P +S L+ +T G +Q S C+
Sbjct: 888 KQVCPSQLESPKQSDLSPKNTLKQAGPSQLESPEPCV 924
Score = 33.9 bits (74), Expect = 0.15
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = -1
Query: 685 PSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQL 506
PS QC +P K TL CP SQ +P QC ++P ++T K+ C SQL
Sbjct: 804 PSQLESPKQCISPPKNTLKQVCP----SQLESPK--QC--ISPPKNTL----KQVCPSQL 851
Query: 505 TSPS--TGHTQSTSRSTCLCTLRSP 437
SP ++T + C L SP
Sbjct: 852 ESPKQCISPLKNTLKQVCPSQLESP 876
Score = 33.9 bits (74), Expect = 0.15
Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 6/106 (5%)
Frame = -1
Query: 715 PNQCLTPSRS------PSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPS 554
P QC++P ++ PS QC +P K TL CP SQ +P + P
Sbjct: 854 PKQCISPLKNTLKQVCPSQLESPKQCISPPKNTLKQVCP----SQLESPKQSDLSPKNTL 909
Query: 553 RSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRY 416
+ +Q + P P ++T + C L SP + R+
Sbjct: 910 KQAGPSQLESP------EPCVTPPKNTLKQVGTCHLESPKQADSRF 949
>SB_11301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 34.7 bits (76), Expect = 0.086
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = -1
Query: 652 TPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRT--Q*KRPCRSQLTSPSTGHTQ 479
TP K L P + TP + Q TP +S+ +T + C + ++ S+ HT+
Sbjct: 90 TPCKDKLLHNTPCKEQLSHNTPCKEQLSHNTPCKSSCQTTHHARSSCHTTHSARSSCHTK 149
Query: 478 STSRSTCLCTLRSPYRTQLRY 416
++RS+C T P + QL +
Sbjct: 150 HSTRSSCHTT--QPCKKQLSH 168
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 33.9 bits (74), Expect = 0.15
Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Frame = -1
Query: 715 PNQCLTPSRSPSHTR*KNQCPTPLKYTLTAQCPSMS----RSQFRTPSRYQCPPLTPSRS 548
P TP+ PS+T + PTP + T+ P+ S S TPS P TP+ S
Sbjct: 70 PTTSYTPT--PSYTPTTSYTPTPSYTSTTSYTPTTSYTSTTSYTPTPSYTPTPSYTPTPS 127
Query: 547 TSRTQ*KRPCRSQLTSPS----TGHTQSTS-RSTCLCTLRSPYRTQLRY 416
+ T P S +PS T +T +TS ST T Y + Y
Sbjct: 128 YTSTTSYTPTTSYTPTPSYTSTTSYTSTTSYTSTTSYTSTPSYTSTTSY 176
Score = 31.1 bits (67), Expect = 1.1
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = -1
Query: 715 PNQCLTPSRS----PSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRS 548
P TP+ S PS+T + PTP YT T + + S TPS P TP+ S
Sbjct: 4 PTPSYTPTTSYTSTPSYTPTTSYTPTP-SYTPTTSY-TCTTSYTPTPSYTPTPSYTPTTS 61
Query: 547 TSRTQ*KRPCRSQLTSPSTGHTQSTS 470
+ T P S +PS +T +TS
Sbjct: 62 YTPTTSYTPTTSYTPTPS--YTPTTS 85
>SB_30317| Best HMM Match : Protamine_3 (HMM E-Value=0.091)
Length = 761
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = -1
Query: 616 SMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRS 440
S SRS+ ++ SR + +P+RS S + + RS S S HT+S SRS RS
Sbjct: 406 SSSRSRTKSRSRSRIRSRSPARSRSWSHTRSRSRSHTRSRSRSHTRSRSRSRIRSRSRS 464
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = -1
Query: 562 TPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRYR 413
T SRS SR + + P RS+ S + ++S +RS RS R+++R R
Sbjct: 412 TKSRSRSRIRSRSPARSRSWSHTRSRSRSHTRSRSRSHTRSRSRSRIRSR 461
>SB_57398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 664
Score = 31.9 bits (69), Expect = 0.61
Identities = 21/54 (38%), Positives = 23/54 (42%)
Frame = +3
Query: 552 LDGVRGGHWYLDGVRNWLLDMDGHWAVNVYFNGVGHWFFYRVWDGLLDGVRHWF 713
L GV G WYL GV W L W Y GV W+ V L GV W+
Sbjct: 17 LTGVCG--WYLTGVCGWYLTGVCGW----YLTGVCGWYLTGVCGWYLTGVCGWY 64
Score = 31.9 bits (69), Expect = 0.61
Identities = 21/54 (38%), Positives = 23/54 (42%)
Frame = +3
Query: 552 LDGVRGGHWYLDGVRNWLLDMDGHWAVNVYFNGVGHWFFYRVWDGLLDGVRHWF 713
L GV G WYL GV W L W Y GV W+ V L GV W+
Sbjct: 25 LTGVCG--WYLTGVCGWYLTGVCGW----YLTGVCGWYLTGVCGWYLTGVCGWY 72
Score = 31.9 bits (69), Expect = 0.61
Identities = 21/54 (38%), Positives = 23/54 (42%)
Frame = +3
Query: 552 LDGVRGGHWYLDGVRNWLLDMDGHWAVNVYFNGVGHWFFYRVWDGLLDGVRHWF 713
L GV G WYL GV W L W Y GV W+ V L GV W+
Sbjct: 33 LTGVCG--WYLTGVCGWYLTGVCGW----YLTGVCGWYLTGVCGWYLTGVCGWY 80
Score = 31.9 bits (69), Expect = 0.61
Identities = 21/54 (38%), Positives = 23/54 (42%)
Frame = +3
Query: 552 LDGVRGGHWYLDGVRNWLLDMDGHWAVNVYFNGVGHWFFYRVWDGLLDGVRHWF 713
L GV G WYL GV W L W Y GV W+ V L GV W+
Sbjct: 41 LTGVCG--WYLTGVCGWYLTGVCGW----YLTGVCGWYLTGVCGWYLTGVCGWY 88
Score = 31.9 bits (69), Expect = 0.61
Identities = 21/54 (38%), Positives = 23/54 (42%)
Frame = +3
Query: 552 LDGVRGGHWYLDGVRNWLLDMDGHWAVNVYFNGVGHWFFYRVWDGLLDGVRHWF 713
L GV G WYL GV W L W Y GV W+ V L GV W+
Sbjct: 49 LTGVCG--WYLTGVCGWYLTGVCGW----YLTGVCGWYLTGVCGWYLTGVCGWY 96
Score = 31.9 bits (69), Expect = 0.61
Identities = 21/54 (38%), Positives = 23/54 (42%)
Frame = +3
Query: 552 LDGVRGGHWYLDGVRNWLLDMDGHWAVNVYFNGVGHWFFYRVWDGLLDGVRHWF 713
L GV G WYL GV W L W Y GV W+ V L GV W+
Sbjct: 57 LTGVCG--WYLTGVCGWYLTGVCGW----YLTGVCGWYLTGVCGWYLTGVCGWY 104
Score = 31.9 bits (69), Expect = 0.61
Identities = 21/54 (38%), Positives = 23/54 (42%)
Frame = +3
Query: 552 LDGVRGGHWYLDGVRNWLLDMDGHWAVNVYFNGVGHWFFYRVWDGLLDGVRHWF 713
L GV G WYL GV W L W Y GV W+ V L GV W+
Sbjct: 65 LTGVCG--WYLTGVCGWYLTGVCGW----YLTGVCGWYLTGVCGWYLTGVCGWY 112
Score = 31.9 bits (69), Expect = 0.61
Identities = 21/54 (38%), Positives = 23/54 (42%)
Frame = +3
Query: 552 LDGVRGGHWYLDGVRNWLLDMDGHWAVNVYFNGVGHWFFYRVWDGLLDGVRHWF 713
L GV G WYL GV W L W Y GV W+ V L GV W+
Sbjct: 73 LTGVCG--WYLTGVCGWYLTGVCGW----YLTGVCGWYLTGVCGWYLTGVCGWY 120
Score = 31.9 bits (69), Expect = 0.61
Identities = 21/54 (38%), Positives = 23/54 (42%)
Frame = +3
Query: 552 LDGVRGGHWYLDGVRNWLLDMDGHWAVNVYFNGVGHWFFYRVWDGLLDGVRHWF 713
L GV G WYL GV W L W Y GV W+ V L GV W+
Sbjct: 81 LTGVCG--WYLTGVCGWYLTGVCGW----YLTGVCGWYLTGVCGWYLTGVCGWY 128
Score = 31.9 bits (69), Expect = 0.61
Identities = 21/54 (38%), Positives = 23/54 (42%)
Frame = +3
Query: 552 LDGVRGGHWYLDGVRNWLLDMDGHWAVNVYFNGVGHWFFYRVWDGLLDGVRHWF 713
L GV G WYL GV W L W Y GV W+ V L GV W+
Sbjct: 89 LTGVCG--WYLTGVCGWYLTGVCGW----YLTGVCGWYLTGVCGWYLTGVCGWY 136
Score = 31.9 bits (69), Expect = 0.61
Identities = 21/54 (38%), Positives = 23/54 (42%)
Frame = +3
Query: 552 LDGVRGGHWYLDGVRNWLLDMDGHWAVNVYFNGVGHWFFYRVWDGLLDGVRHWF 713
L GV G WYL GV W L W Y GV W+ V L GV W+
Sbjct: 97 LTGVCG--WYLTGVCGWYLTGVCGW----YLTGVCGWYLTGVCGWYLTGVCGWY 144
Score = 31.5 bits (68), Expect = 0.80
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +3
Query: 552 LDGVRGGHWYLDGVRNWLLDMDGHWAVNVYFNGVGHWFFYRVWDGLLDGVRHWF 713
L GV G WYL GV W L W Y GV W+ V L G+ W+
Sbjct: 105 LTGVCG--WYLTGVCGWYLTGVCGW----YLTGVCGWYLTGVCGWYLTGICGWY 152
Score = 31.5 bits (68), Expect = 0.80
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +3
Query: 552 LDGVRGGHWYLDGVRNWLLDMDGHWAVNVYFNGVGHWFFYRVWDGLLDGVRHWF 713
L GV G WYL GV W L W Y GV W+ + L GV W+
Sbjct: 113 LTGVCG--WYLTGVCGWYLTGVCGW----YLTGVCGWYLTGICGWYLTGVCGWY 160
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/53 (37%), Positives = 23/53 (43%)
Frame = +3
Query: 555 DGVRGGHWYLDGVRNWLLDMDGHWAVNVYFNGVGHWFFYRVWDGLLDGVRHWF 713
+GV G WYL GV W L W Y GV W+ V L GV W+
Sbjct: 10 NGVCG--WYLTGVCGWYLTGVCGW----YLTGVCGWYLTGVCGWYLTGVCGWY 56
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = +3
Query: 552 LDGVRGGHWYLDGVRNWLLDMDGHWAVNVYFNGVGHWFFYRVWDGLLDGVRHWF 713
L G+ G WYL GV W L W Y GV W+ + L GV W+
Sbjct: 185 LPGICG--WYLTGVCGWYLTGICGW----YLTGVCGWYLTGICGWYLTGVCGWY 232
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +3
Query: 552 LDGVRGGHWYLDGVRNWLLDMDGHWAVNVYFNGVGHWFFYRVWDGLLDGVRHWF 713
L GV G WYL G+ W L W Y G+ W+ V L G+ W+
Sbjct: 177 LTGVCG--WYLPGICGWYLTGVCGW----YLTGICGWYLTGVCGWYLTGICGWY 224
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/50 (40%), Positives = 21/50 (42%)
Frame = +3
Query: 552 LDGVRGGHWYLDGVRNWLLDMDGHWAVNVYFNGVGHWFFYRVWDGLLDGV 701
L GV G WYL GV W L W Y GV W+ V L GV
Sbjct: 129 LTGVCG--WYLTGVCGWYLTGICGW----YLTGVCGWYLTGVCGSYLTGV 172
Score = 28.3 bits (60), Expect = 7.5
Identities = 22/61 (36%), Positives = 24/61 (39%)
Frame = +3
Query: 519 HGLFYWVRDVLLDGVRGGHWYLDGVRNWLLDMDGHWAVNVYFNGVGHWFFYRVWDGLLDG 698
H L V L G+ G WYL GV W L W Y GV W+ V L G
Sbjct: 459 HTLLASVCGWYLTGICG--WYLTGVCGWYLTGICGW----YLTGVCGWYLTDVCGWYLTG 512
Query: 699 V 701
V
Sbjct: 513 V 513
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 31.9 bits (69), Expect = 0.61
Identities = 26/94 (27%), Positives = 48/94 (51%)
Frame = -1
Query: 694 SRSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCR 515
SRS S++R +++ P K + + P RS FR R + PP SR +S++ +R
Sbjct: 625 SRSSSYSRSRSRSPDRRKRSYSP--PPRRRSPFR--ERRRSPPRRTSRWSSQSPDRRSPA 680
Query: 514 SQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRYR 413
+SP+ ++S S S +SP ++++ +
Sbjct: 681 RIKSSPARSRSRSQSASPRHSKSKSPALSKVQVK 714
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 31.5 bits (68), Expect = 0.80
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = -1
Query: 715 PNQCLTPSR-SPS-HTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTS 542
P TP++ +P+ HT K TP T P+ + P++ P TP+ +T
Sbjct: 20 PQTTPTPTKPTPTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTP 79
Query: 541 RTQ*KRPCRSQLTSPSTGHTQSTSRST 461
+ P S LT P+ T + ++ T
Sbjct: 80 TPKTPTPTTSTLTKPTPATTPTPTKPT 106
>SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1680
Score = 31.5 bits (68), Expect = 0.80
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = -1
Query: 736 TLXPCIFPNQCLTPSRSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTP 557
TL P Q P+ +P+ T+ +N PTP P+ +++ TP+ Q P P
Sbjct: 709 TLSTAAQPTQAQNPAPTPAPTQAQNPAPTP--------APTQAQNPAPTPAPTQAQPPVP 760
Query: 556 SRSTSRTQ*KRP 521
S + ++ Q P
Sbjct: 761 SPAPTQAQPPAP 772
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = -1
Query: 739 QTLXPCIFPNQCLTPSRSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCP 569
Q P P Q P+ +P+ T+ +N PTP PS + +Q + P+ P
Sbjct: 720 QNPAPTPAPTQAQNPAPTPAPTQAQNPAPTPAPTQAQPPVPSPAPTQAQPPAPSPAP 776
>SB_36215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1427
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/70 (31%), Positives = 28/70 (40%)
Frame = -1
Query: 691 RSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRS 512
RSP R N+ P T +A+CP S R + PP P RS + R
Sbjct: 582 RSPKMERVANRRSDPSGNTTSARCPLDFASSRREVVDEEIPPPLPPRSLKSSPRSRDPSP 641
Query: 511 QLTSPSTGHT 482
+ S S G T
Sbjct: 642 PIASSSPGST 651
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 548 HIPYPVEKAVPFPVNIPVDRPYPVHIEKHVPVH 450
H P+PV V P +PV P PV + VP+H
Sbjct: 212 HHPFPVRVPVRVPFRVPVRVPVPVRVP--VPIH 242
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 518 PFPVNIPVDRPYPVHIEKHVPVHI 447
PFPV +PV P+ V + VPV +
Sbjct: 214 PFPVRVPVRVPFRVPVRVPVPVRV 237
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 30.7 bits (66), Expect = 1.4
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Frame = -1
Query: 760 PSKGPCGQTLXPCIFPNQCLTPSRSPSHTR*KNQCPTP-LKYTLTAQCPSMSRSQFRTPS 584
PS TL I P+ TPS +PS + TP T + C + S TPS
Sbjct: 228 PSTPSTPSTLSTPITPSTPSTPS-TPSTPSMPSTPSTPSTPSTPSTPCTPNTPSTPSTPS 286
Query: 583 RYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRS-TCLCTLRSP 437
P + ST T S ++PST T ST ++ + CT +P
Sbjct: 287 MPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPKTPSTPCTPNTP 336
Score = 30.7 bits (66), Expect = 1.4
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Frame = -1
Query: 760 PSKGPCGQTLXPCIFPNQCLTPSRSPSHTR*KNQCPTP-LKYTLTAQCPSMSRSQFRTPS 584
PS TL I P+ TPS +PS + TP T + C + S TPS
Sbjct: 778 PSTPSTPSTLSTPITPSTPSTPS-TPSTPSMPSTPSTPSTPSTPSTPCTPNTPSTPSTPS 836
Query: 583 RYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRS-TCLCTLRSP 437
P + ST T S ++PST T ST ++ + CT +P
Sbjct: 837 MPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPKTPSTPCTPNTP 886
>SB_42365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 791
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = -1
Query: 631 TAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLC 452
T S SR+ R+ SR Q ++ SRS S +Q + +S S S ++S SRS
Sbjct: 222 TPSSGSGSRNSSRSASRSQSHSVSRSRSKSLSQSRSRSQSHSASRSVSRSRSRSRSGSRS 281
Query: 451 TLRS 440
RS
Sbjct: 282 RTRS 285
>SB_39937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +1
Query: 454 TGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 543
TG WTG+G TG TG+GT TG+G
Sbjct: 171 TGHGTGRWTGHG--TGRWTGHGTGRWTGHG 198
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 454 TGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 543
TG WTG+G TG TG+GT G G
Sbjct: 179 TGHGTGRWTGHG--TGRWTGHGTGMGQGVG 206
>SB_12896| Best HMM Match : Plasmodium_HRP (HMM E-Value=1.1)
Length = 284
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -1
Query: 508 LTSPSTGHTQSTSRSTCLCTLRSPYRTQLRY 416
L P+T HT T+ T CT R PYR +RY
Sbjct: 112 LRIPNTLHTTHTAYRT-QCTYRIPYRYHIRY 141
>SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042)
Length = 792
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = -1
Query: 616 SMSRSQFRTPSRYQCPPLTP--SRSTSRTQ*KRPCRSQLTSPSTGHTQST 473
S SRS R+ SR P L+P SRS SR++ + +S SP+ +T++T
Sbjct: 427 SYSRSPVRSWSRSHSPSLSPQRSRSYSRSRSRSFSKSISGSPTPKYTRTT 476
>SB_42815| Best HMM Match : rve (HMM E-Value=0.00022)
Length = 1514
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Frame = -1
Query: 616 SMSRSQFRTPSRYQCPPLTPSRSTSRTQ*K------RPCRSQLTSPSTGHT-QSTSRSTC 458
S SRS+ RTPS P T SR++SR + K + + T S G +T+++ C
Sbjct: 1375 SRSRSRTRTPSTPFTPSTTSSRASSRGKAKGGAKTTKTTKKCTTRKSRGQNGDTTTKTKC 1434
Query: 457 LCTLR 443
+ T R
Sbjct: 1435 ITTRR 1439
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = -1
Query: 616 SMSRSQFRTPSRYQ----CPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRS 464
++SR Q R PS PP S SR+ + RS+ +PST T ST+ S
Sbjct: 1341 ALSRQQRRRPSPSSLGSLAPPSRTSTPRSRSTPRSRSRSRTRTPSTPFTPSTTSS 1395
>SB_33207| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 106
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/71 (26%), Positives = 25/71 (35%), Gaps = 4/71 (5%)
Frame = +3
Query: 510 WERHGLFYWVRDVLLDGVRGGHWYLDGVRNWLLDMDGHWAVNVYF----NGVGHWFFYRV 677
W G+ W+ D R W DGV W+ D W + F +G W V
Sbjct: 15 WFEDGVVTWMTD------RANPWLEDGVVTWMTDWADPWLEDGVFTWLTDGADPWLEDGV 68
Query: 678 WDGLLDGVRHW 710
+ DG W
Sbjct: 69 VTWMTDGADPW 79
>SB_56923| Best HMM Match : PT (HMM E-Value=0.95)
Length = 441
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 655 PTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRS 548
PT ++T+ C S R+P QC P +P+ S
Sbjct: 309 PTESTSSMTSPCGSQMSYPARSPPHVQCDPFSPTSS 344
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -1
Query: 616 SMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPS 494
S SRS+ RTP R++ +P++ SR++ + P R + S S
Sbjct: 62 SFSRSKSRTPPRHRRRSRSPNKKHSRSKSRTPPRHRRRSRS 102
>SB_27357| Best HMM Match : MFMR (HMM E-Value=3.2)
Length = 468
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = -1
Query: 655 PTPLKYTLTAQCPSMS-RSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQ 479
P + +T + P+ S ++ R P+ C P T S + P RS LT P +
Sbjct: 154 PANINFTTAPEPPAKSAQTPPRIPTPTSCQPSTISPGGTPYMYGGPYRSALTYPVLVQQK 213
Query: 478 STSRSTCLCTL 446
RS C T+
Sbjct: 214 RLDRSPCHVTM 224
>SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1446
Score = 27.9 bits (59), Expect = 9.9
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 11/102 (10%)
Frame = -1
Query: 700 TPSRSPSHTR*KNQCPTP-----LKYTLTAQCPSMSRSQFRTPSR-----YQCPPLTPSR 551
+PS +P + + PT L +T A + S+ P R Y PP T S
Sbjct: 951 SPSLTPLYEERCQETPTDSSTASLAHTSPAHLATASQITHPLPHRTISIPYPSPPHTTSS 1010
Query: 550 STSRTQ*KRPCRS-QLTSPSTGHTQSTSRSTCLCTLRSPYRT 428
+S+ P R+ L PS+ H+ S S+ T PY T
Sbjct: 1011 QSSQATHTPPPRAVDLPHPSSPHSSSALYSSPSRTSNLPYTT 1052
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 27.9 bits (59), Expect = 9.9
Identities = 25/94 (26%), Positives = 42/94 (44%)
Frame = -1
Query: 694 SRSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCR 515
SR S +R +++ P + ++ P SRS P R + P + +SR+ K
Sbjct: 226 SRKRSESRSRSRSPKKSRSARRSRSPQKSRS----PQRSRSPRSSKRYRSSRSHRKHRSH 281
Query: 514 SQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRYR 413
S+ SP + ++S + RS R+ RYR
Sbjct: 282 SRSRSPRSKRSRSPRKRR-----RSKSRSPRRYR 310
>SB_50810| Best HMM Match : DUF1452 (HMM E-Value=4.9)
Length = 214
Score = 27.9 bits (59), Expect = 9.9
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = -1
Query: 715 PNQCLTPSRSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRT 536
P+ TP+R S R ++ PL+ + + + F PS P TP+ + S
Sbjct: 110 PHNIFTPAREHSTCRAESPAHVPLRRQEDRE-RGLHEATF--PSTSVTIPSTPAGALSIN 166
Query: 535 Q*KRPCRSQLTSPSTGHTQSTSRSTCLCTLR-SPYR 431
K+P L +P H +T ST + +PYR
Sbjct: 167 LFKQPFHQPLPTPFHQHLPATFSSTFPGNVSINPYR 202
>SB_45212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1304
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = -1
Query: 616 SMSRSQFRTPS---RYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTG 488
S SRSQ T + + QC P +T + K C S T P+TG
Sbjct: 1086 SSSRSQPNTGTDEPKAQCNSSRPQPNTGTDEPKAQCNSSRTQPNTG 1131
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -1
Query: 595 RTPSRYQCPPLTP--SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRS 464
R P R + PP P SR ++TQ + RS + ST HT S++ S
Sbjct: 252 RGPPRQEHPPPPPPGSRGRAKTQLQLIPRSLQKTSSTPHTSSSTSS 297
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 27.9 bits (59), Expect = 9.9
Identities = 22/65 (33%), Positives = 32/65 (49%)
Frame = -1
Query: 736 TLXPCIFPNQCLTPSRSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTP 557
+L P I PN + P+ +P HT + PTP +T P+ S TP+ + P TP
Sbjct: 233 SLLPLI-PNTSIPPTPTP-HT---SIPPTPTPHTSIPPTPTPHTSIPPTPTPHTSIPPTP 287
Query: 556 SRSTS 542
+ TS
Sbjct: 288 TPHTS 292
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,614,694
Number of Sequences: 59808
Number of extensions: 352655
Number of successful extensions: 1458
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1354
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2167838629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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